RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 PSMC5P62195 406 aa20.12■□□□□ 0.81
CLK1-205ENST00000434813 KRT76Q01546 638 aa20.12■□□□□ 0.81
CLK1-205ENST00000434813 TRADDQ15628 312 aa20.12■□□□□ 0.81
CLK1-205ENST00000434813 PALB2Q86YC2 1186 aa20.12■□□□□ 0.81
CLK1-205ENST00000434813 CD302Q8IX05 232 aa20.12■□□□□ 0.81
CLK1-205ENST00000434813 PDCD2LQ9BRP1 358 aa20.12■□□□□ 0.81
CLK1-205ENST00000434813 USP20Q9Y2K6 914 aa20.12■□□□□ 0.81
CLK1-205ENST00000434813 DDX3YO15523 660 aaKnown RBP20.12■□□□□ 0.81
CLK1-205ENST00000434813 DGKZQ13574 1117 aa20.12■□□□□ 0.81
CLK1-205ENST00000434813 ARHGEF19Q8IW93 802 aa20.12■□□□□ 0.81
CLK1-205ENST00000434813 GPC2Q8N158 579 aa20.12■□□□□ 0.81
CLK1-205ENST00000434813 PIK3R5Q8WYR1 880 aa20.12■□□□□ 0.81
CLK1-205ENST00000434813 ARL8AQ96BM9 186 aa20.12■□□□□ 0.81
CLK1-205ENST00000434813 ARHGEF26Q96DR7 871 aa20.12■□□□□ 0.81
CLK1-205ENST00000434813 THAP2Q9H0W7 228 aa20.12■□□□□ 0.81
CLK1-205ENST00000434813 UBE2TQ9NPD8 197 aaPredicted RBP20.12■□□□□ 0.81
CLK1-205ENST00000434813 PXMP2Q9NR77 195 aa20.12■□□□□ 0.81
CLK1-205ENST00000434813 TAS2R14Q9NYV8 317 aa20.12■□□□□ 0.81
CLK1-205ENST00000434813 CCNE2O96020 404 aa20.11■□□□□ 0.81
CLK1-205ENST00000434813 GCLMP48507 274 aa20.11■□□□□ 0.81
CLK1-205ENST00000434813 APOBEC3FQ8IUX4 373 aaKnown RBP20.11■□□□□ 0.81
CLK1-205ENST00000434813 RHOT2Q8IXI1 618 aa20.11■□□□□ 0.81
CLK1-205ENST00000434813 RMDN3Q96TC7 470 aa20.11■□□□□ 0.81
CLK1-205ENST00000434813 DDX47Q9H0S4 455 aaKnown RBP20.11■□□□□ 0.81
CLK1-205ENST00000434813 CARD9Q9H257 536 aa20.11■□□□□ 0.81
CLK1-205ENST00000434813 ANKEF1Q9NU02 776 aa20.11■□□□□ 0.81
CLK1-205ENST00000434813 TMEM150BA6NC51 233 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 ZNF233A6NK53 670 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 TULP2O00295 520 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 FDX1P10109 184 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 MXI1P50539 228 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 MTMR2Q13614 643 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 TCEAL1Q15170 157 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 DCAF15Q66K64 600 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 RNF207Q6ZRF8 634 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 PLEKHO2Q8TD55 490 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 SLC20A1Q8WUM9 679 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 HVCN1Q96D96 273 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 GPRC5CQ9NQ84 441 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 SEPT11Q9NVA2 429 aaKnown RBP20.1■□□□□ 0.81
CLK1-205ENST00000434813 GPRC5DQ9NZD1 345 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 DOCK1Q14185 1865 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 SLC16A4O15374 487 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 ZBED4O75132 1171 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 MYCLP12524 364 aaPredicted RBP20.1■□□□□ 0.81
CLK1-205ENST00000434813 PEX3P56589 373 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 SKOR1P84550 965 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 HLTFQ14527 1009 aaKnown RBP eCLIP20.1■□□□□ 0.81
CLK1-205ENST00000434813 GPR162Q16538 588 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 ANGEL2Q5VTE6 544 aaKnown RBP20.1■□□□□ 0.81
CLK1-205ENST00000434813 XRRA1Q6P2D8 792 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 C1orf131Q8NDD1 294 aaKnown RBP20.1■□□□□ 0.81
CLK1-205ENST00000434813 RDM1Q8NG50 284 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 TRERF1Q96PN7 1200 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 TCEAL9Q9UHQ7 104 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 PFASO15067 1338 aa20.1■□□□□ 0.81
CLK1-205ENST00000434813 ATP9AO75110 1047 aa20.09■□□□□ 0.81
CLK1-205ENST00000434813 PPFIA4O75335 1185 aa20.09■□□□□ 0.81
CLK1-205ENST00000434813 KRT14P02533 472 aa20.09■□□□□ 0.81
CLK1-205ENST00000434813 ITGA4P13612 1032 aa20.09■□□□□ 0.81
CLK1-205ENST00000434813 FOXR1Q6PIV2 292 aa20.09■□□□□ 0.81
CLK1-205ENST00000434813 MAATS1Q7Z4T9 603 aa20.09■□□□□ 0.81
CLK1-205ENST00000434813 SH2D3AQ9BRG2 576 aa20.09■□□□□ 0.81
CLK1-205ENST00000434813 TMEM117Q9H0C3 514 aa20.09■□□□□ 0.81
CLK1-205ENST00000434813 RPAP3Q9H6T3 665 aaPredicted RBP20.09■□□□□ 0.81
CLK1-205ENST00000434813 COG5Q9UP83 839 aa20.09■□□□□ 0.81
CLK1-205ENST00000434813 EXOC7Q9UPT5 735 aa20.09■□□□□ 0.81
CLK1-205ENST00000434813 CTDP1Q9Y5B0 961 aaPredicted RBP20.09■□□□□ 0.81
CLK1-205ENST00000434813 ADRB2P07550 413 aa20.09■□□□□ 0.81
CLK1-205ENST00000434813 NBPF12Q5TAG4 269 aaPredicted RBP20.09■□□□□ 0.81
CLK1-205ENST00000434813 DCAF12L1Q5VU92 463 aa20.09■□□□□ 0.81
CLK1-205ENST00000434813 C11orf63Q6NUN7 778 aa20.09■□□□□ 0.81
CLK1-205ENST00000434813 MAP4K3Q8IVH8 894 aa20.09■□□□□ 0.81
CLK1-205ENST00000434813 ZSWIM2Q8NEG5 633 aa20.09■□□□□ 0.81
CLK1-205ENST00000434813 CCDC26Q8TAB7 109 aa20.09■□□□□ 0.81
CLK1-205ENST00000434813 SEC14L1Q92503 715 aa20.09■□□□□ 0.81
CLK1-205ENST00000434813 CAPS2Q9BXY5 557 aa20.09■□□□□ 0.81
CLK1-205ENST00000434813 VWA5AO00534 786 aa20.08■□□□□ 0.8
CLK1-205ENST00000434813 IRAK1P51617 712 aa20.08■□□□□ 0.8
CLK1-205ENST00000434813 XKR9Q5GH70 373 aa20.08■□□□□ 0.8
CLK1-205ENST00000434813 FAM102BQ5T8I3 360 aa20.08■□□□□ 0.8
CLK1-205ENST00000434813 ARHGEF16Q5VV41 709 aa20.08■□□□□ 0.8
CLK1-205ENST00000434813 PLA2G4FQ68DD2 849 aa20.08■□□□□ 0.8
CLK1-205ENST00000434813 AMACRQ9UHK6 382 aa20.08■□□□□ 0.8
CLK1-205ENST00000434813 TESPA1A2RU30 521 aaPredicted RBP20.07■□□□□ 0.8
CLK1-205ENST00000434813 A6NNZ2 444 aa20.07■□□□□ 0.8
CLK1-205ENST00000434813 FGGP02679 453 aa20.07■□□□□ 0.8
CLK1-205ENST00000434813 POU5F1Q01860 360 aaKnown RBP20.07■□□□□ 0.8
CLK1-205ENST00000434813 CLUL1Q15846 466 aa20.07■□□□□ 0.8
CLK1-205ENST00000434813 TUBB8Q3ZCM7 444 aa20.07■□□□□ 0.8
CLK1-205ENST00000434813 ZNF746Q6NUN9 644 aaPredicted RBP20.07■□□□□ 0.8
CLK1-205ENST00000434813 LRIG3Q6UXM1 1119 aa20.07■□□□□ 0.8
CLK1-205ENST00000434813 NSMFQ6X4W1 530 aa20.07■□□□□ 0.8
CLK1-205ENST00000434813 SRLQ86TD4 932 aa20.07■□□□□ 0.8
CLK1-205ENST00000434813 TMEM161BQ8NDZ6 487 aa20.07■□□□□ 0.8
CLK1-205ENST00000434813 TRPM4Q8TD43 1214 aa20.07■□□□□ 0.8
CLK1-205ENST00000434813 LRRC45Q96CN5 670 aa20.07■□□□□ 0.8
CLK1-205ENST00000434813 RNPC3Q96LT9 517 aaKnown RBP20.07■□□□□ 0.8
CLK1-205ENST00000434813 NAP1L3Q99457 506 aaPredicted RBP20.07■□□□□ 0.8
CLK1-205ENST00000434813 SENP7Q9BQF6 1050 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms