RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 CXCL17Q6UXB2 119 aa13□□□□□ -0.33
UBE3B-203ENST00000434735 VSIG1Q86XK7 387 aa13□□□□□ -0.33
UBE3B-203ENST00000434735 DGAT1O75907 488 aa13□□□□□ -0.33
UBE3B-203ENST00000434735 MBL2P11226 248 aaPredicted RBP13□□□□□ -0.33
UBE3B-203ENST00000434735 KRT3P12035 628 aa13□□□□□ -0.33
UBE3B-203ENST00000434735 MTX1Q13505 466 aa13□□□□□ -0.33
UBE3B-203ENST00000434735 C10orf120Q5SQS8 335 aa13□□□□□ -0.33
UBE3B-203ENST00000434735 RMDN1Q96DB5 314 aa13□□□□□ -0.33
UBE3B-203ENST00000434735 MRPL47Q9HD33 250 aaKnown RBP13□□□□□ -0.33
UBE3B-203ENST00000434735 ESRRBO95718 433 aa13□□□□□ -0.33
UBE3B-203ENST00000434735 ADCYAP1R1P41586 468 aa13□□□□□ -0.33
UBE3B-203ENST00000434735 SFSWAPQ12872 951 aaKnown RBP13□□□□□ -0.33
UBE3B-203ENST00000434735 SCFD1Q8WVM8 642 aa13□□□□□ -0.33
UBE3B-203ENST00000434735 PLCB1Q9NQ66 1216 aa13□□□□□ -0.33
UBE3B-203ENST00000434735 THG1LQ9NWX6 298 aaKnown RBP13□□□□□ -0.33
UBE3B-203ENST00000434735 BARHL2Q9NY43 387 aa13□□□□□ -0.33
UBE3B-203ENST00000434735 PCDHA7Q9UN72 937 aa13□□□□□ -0.33
UBE3B-203ENST00000434735 CTXN3Q4LDR2 81 aa13□□□□□ -0.33
UBE3B-203ENST00000434735 TXNRD3Q86VQ6 643 aa13□□□□□ -0.33
UBE3B-203ENST00000434735 P2RX5Q93086 422 aa13□□□□□ -0.33
UBE3B-203ENST00000434735 CYP4F11Q9HBI6 524 aa13□□□□□ -0.33
UBE3B-203ENST00000434735 UBE4BO95155 1302 aa13□□□□□ -0.33
UBE3B-203ENST00000434735 KCNK3O14649 394 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 ASAP2O43150 1006 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 RNASEH1O60930 286 aaKnown RBP12.99□□□□□ -0.33
UBE3B-203ENST00000434735 EPHB3P54753 998 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 FKBP1BP68106 108 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 ACVR2BQ13705 512 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 CDKL2Q92772 493 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 ARHGEF2Q92974 986 aaKnown RBP12.99□□□□□ -0.33
UBE3B-203ENST00000434735 RILPQ96NA2 401 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 ABHD16BQ9H3Z7 469 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 ORC4O43929 436 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 CD4P01730 458 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 ANKRD20A3Q5VUR7 823 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 ATG9AQ7Z3C6 839 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 SLC25A13Q9UJS0 675 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 CA12O43570 354 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 ACOT2P49753 483 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 CLCN3P51790 818 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 CDK17Q00537 523 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 PDE1BQ01064 536 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 ATF7IP2Q5U623 682 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 TDRD10Q5VZ19 366 aaKnown RBP12.99□□□□□ -0.33
UBE3B-203ENST00000434735 REM2Q8IYK8 340 aaPredicted RBP12.99□□□□□ -0.33
UBE3B-203ENST00000434735 IQCDQ96DY2 449 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 HAUS8Q9BT25 410 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 NAA35Q5VZE5 725 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 RAB44Q7Z6P3 723 aaPredicted RBP12.99□□□□□ -0.33
UBE3B-203ENST00000434735 FAM83AQ86UY5 434 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 MIPOL1Q8TD10 442 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 ZC3H15Q8WU90 426 aaKnown RBP12.99□□□□□ -0.33
UBE3B-203ENST00000434735 EXT2Q93063 718 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 WNK4Q96J92 1243 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 MOV10L1Q9BXT6 1211 aaKnown RBP12.99□□□□□ -0.33
UBE3B-203ENST00000434735 DFFAO00273 331 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 SOCS7O14512 581 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 NKRFO15226 690 aaKnown RBP eCLIP12.99□□□□□ -0.33
UBE3B-203ENST00000434735 MGEA5O60502 916 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 ICAM1P05362 532 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 CMA1P23946 247 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 MDM2Q00987 491 aaPredicted RBP12.99□□□□□ -0.33
UBE3B-203ENST00000434735 TNS2Q63HR2 1409 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 IL31Q6EBC2 164 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 NSUN7Q8NE18 718 aaKnown RBP12.99□□□□□ -0.33
UBE3B-203ENST00000434735 TUBGCP2Q9BSJ2 902 aa12.99□□□□□ -0.33
UBE3B-203ENST00000434735 KLHL8Q9P2G9 620 aaPredicted RBP12.99□□□□□ -0.33
UBE3B-203ENST00000434735 ABCA6Q8N139 1617 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 AOC2O75106 756 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 RASA1P20936 1047 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 PHBP35232 272 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 HARS2P49590 506 aaKnown RBP12.98□□□□□ -0.33
UBE3B-203ENST00000434735 RBP5P82980 135 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 PPM1LQ5SGD2 360 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 TAS2R42Q7RTR8 314 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 KSR1Q8IVT5 923 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 TRIM48Q8IWZ4 208 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 GPD1LQ8N335 351 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 FIBCD1Q8N539 461 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 PPP1R13LQ8WUF5 828 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 DNAJB3Q8WWF6 145 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 BUB1BO60566 1050 aaPredicted RBP12.98□□□□□ -0.33
UBE3B-203ENST00000434735 XYLBO75191 536 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 CSF1RP07333 972 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 PCSK1P29120 753 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 SDC4P31431 198 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 NSUN2Q08J23 767 aaKnown RBP eCLIP12.98□□□□□ -0.33
UBE3B-203ENST00000434735 CACUL1Q86Y37 369 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 TMTC1Q8IUR5 882 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 NAGPAQ9UK23 515 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 PPP1R9AQ9ULJ8 1098 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 AK9Q5TCS8 1911 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 F5H423 210 aaPredicted RBP12.98□□□□□ -0.33
UBE3B-203ENST00000434735 DNAJC6O75061 913 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 STARD3Q14849 445 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 GRK7Q8WTQ7 553 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 OSMRQ99650 979 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 USH1CQ9Y6N9 552 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 H3BRB1 525 aa12.98□□□□□ -0.33
UBE3B-203ENST00000434735 RFC1P35251 1148 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms