RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 SEC14L1Q92503 715 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 TAAR1Q96RJ0 339 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 CAMKK2Q96RR4 588 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 RPS6KC1Q96S38 1066 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 SENP7Q9BQF6 1050 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 MAF1Q9H063 256 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 GOLPH3Q9H4A6 298 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 C17orf75Q9HAS0 396 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 MYOZ2Q9NPC6 264 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 OSGEPQ9NPF4 335 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.27□□□□□ -0.61
CD44-210ENST00000434472 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.27□□□□□ -0.61
CD44-210ENST00000434472 SMCHD1A6NHR9 2005 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 MYH11P35749 1972 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 ZNF233A6NK53 670 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 FGGP02679 453 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 DPEP1P16444 411 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 GBP1P32455 592 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 GTF2H1P32780 548 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 PTENP60484 403 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 CXCL9Q07325 125 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 PPP3CAQ08209 521 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 DHX34Q14147 1143 aaKnown RBP11.26□□□□□ -0.61
CD44-210ENST00000434472 XKR9Q5GH70 373 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 ARHGEF16Q5VV41 709 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 ZNF746Q6NUN9 644 aaPredicted RBP11.26□□□□□ -0.61
CD44-210ENST00000434472 RNF207Q6ZRF8 634 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 MAEAQ7L5Y9 396 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 DNAAF5Q86Y56 855 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 ARHGEF19Q8IW93 802 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 CDAN1Q8IWY9 1227 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 CPXCR1Q8N123 301 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 TMC2Q8TDI7 906 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 SPIRE2Q8WWL2 714 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 KIFAP3Q92845 792 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 GPRASP2Q96D09 838 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 ARHGEF26Q96DR7 871 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 FAM81BQ96LP2 452 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 RUNDC3BQ96NL0 473 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 PDCD2LQ9BRP1 358 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 CBWD1Q9BRT8 395 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 DDX47Q9H0S4 455 aaKnown RBP11.26□□□□□ -0.61
CD44-210ENST00000434472 THAP2Q9H0W7 228 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 TMBIM4Q9HC24 238 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 PXMP2Q9NR77 195 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 CTTNBP2NLQ9P2B4 639 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 KCNG1Q9UIX4 513 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 RASAL2Q9UJF2 1139 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 PLAAQ9Y263 795 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 ASTN2O75129 1339 aaPredicted RBP11.26□□□□□ -0.61
CD44-210ENST00000434472 SYNGAP1Q96PV0 1343 aa11.26□□□□□ -0.61
CD44-210ENST00000434472 H0YCG3 227 aa11.25□□□□□ -0.61
CD44-210ENST00000434472 MYO1CO00159 1063 aa11.25□□□□□ -0.61
CD44-210ENST00000434472 BACH1O14867 736 aa11.25□□□□□ -0.61
CD44-210ENST00000434472 SLC16A4O15374 487 aa11.25□□□□□ -0.61
CD44-210ENST00000434472 MYCLP12524 364 aaPredicted RBP11.25□□□□□ -0.61
CD44-210ENST00000434472 EIF2AK2P19525 551 aaKnown RBP11.25□□□□□ -0.61
CD44-210ENST00000434472 RPS12P25398 132 aaKnown RBP11.25□□□□□ -0.61
CD44-210ENST00000434472 ECHS1P30084 290 aa11.25□□□□□ -0.61
CD44-210ENST00000434472 CCND2P30279 289 aa11.25□□□□□ -0.61
CD44-210ENST00000434472 HSD17B3P37058 310 aa11.25□□□□□ -0.61
CD44-210ENST00000434472 GCLMP48507 274 aa11.25□□□□□ -0.61
CD44-210ENST00000434472 PEX3P56589 373 aa11.25□□□□□ -0.61
CD44-210ENST00000434472 RPS6P62753 249 aaKnown RBP11.25□□□□□ -0.61
CD44-210ENST00000434472 DLG4P78352 724 aa11.25□□□□□ -0.61
CD44-210ENST00000434472 BIRC3Q13489 604 aa11.25□□□□□ -0.61
CD44-210ENST00000434472 NBPF9Q3BBW0 867 aa11.25□□□□□ -0.61
CD44-210ENST00000434472 C1orf220Q5T0J3 134 aa11.25□□□□□ -0.61
CD44-210ENST00000434472 FAM102BQ5T8I3 360 aa11.25□□□□□ -0.61
CD44-210ENST00000434472 SPATS2Q86XZ4 545 aaKnown RBP11.25□□□□□ -0.61
CD44-210ENST00000434472 MAP4K3Q8IVH8 894 aa11.25□□□□□ -0.61
CD44-210ENST00000434472 FAM71AQ8IYT1 594 aa11.25□□□□□ -0.61
CD44-210ENST00000434472 RPUSD2Q8IZ73 545 aaKnown RBP11.25□□□□□ -0.61
CD44-210ENST00000434472 RNPC3Q96LT9 517 aaKnown RBP11.25□□□□□ -0.61
CD44-210ENST00000434472 TRERF1Q96PN7 1200 aa11.25□□□□□ -0.61
CD44-210ENST00000434472 RMDN3Q96TC7 470 aa11.25□□□□□ -0.61
CD44-210ENST00000434472 TMEM117Q9H0C3 514 aa11.25□□□□□ -0.61
CD44-210ENST00000434472 WNT8AQ9H1J5 351 aa11.25□□□□□ -0.61
CD44-210ENST00000434472 TBX20Q9UMR3 447 aa11.25□□□□□ -0.61
CD44-210ENST00000434472 IGSF9BQ9UPX0 1349 aa11.25□□□□□ -0.61
CD44-210ENST00000434472 COL4A5P29400 1685 aa11.25□□□□□ -0.61
CD44-210ENST00000434472 EBAG9O00559 213 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 ZEB2O60315 1214 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 LRRN2O75325 713 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 FTLP02792 175 aaPredicted RBP11.24□□□□□ -0.61
CD44-210ENST00000434472 MYZAPP0CAP1 466 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 ITGA4P13612 1032 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 NR1D1P20393 614 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 KCNA3P22001 575 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 ZNF280AP59817 542 aaPredicted RBP11.24□□□□□ -0.61
CD44-210ENST00000434472 POU5F1Q01860 360 aaKnown RBP11.24□□□□□ -0.61
CD44-210ENST00000434472 DMP1Q13316 513 aaPredicted RBP11.24□□□□□ -0.61
CD44-210ENST00000434472 CEP85LQ5SZL2 805 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 AGBL2Q5U5Z8 902 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 KRT39Q6A163 491 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 SLC16A10Q8TF71 515 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 MOV10L1Q9BXT6 1211 aaKnown RBP11.24□□□□□ -0.61
CD44-210ENST00000434472 RASSF4Q9H2L5 321 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 PLEKHA4Q9H4M7 779 aa11.24□□□□□ -0.61
CD44-210ENST00000434472 AS3MTQ9HBK9 375 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms