RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 PRPF4BQ13523 1007 aaKnown RBP16.87■□□□□ 0.29
CNOT9-205ENST00000433439 STXBP4Q6ZWJ1 553 aa16.87■□□□□ 0.29
CNOT9-205ENST00000433439 TAS1R3Q7RTX0 852 aa16.87■□□□□ 0.29
CNOT9-205ENST00000433439 CDR2LQ86X02 465 aaPredicted RBP16.87■□□□□ 0.29
CNOT9-205ENST00000433439 NELFCDQ8IXH7 590 aa16.87■□□□□ 0.29
CNOT9-205ENST00000433439 SMYD4Q8IYR2 804 aaPredicted RBP16.87■□□□□ 0.29
CNOT9-205ENST00000433439 SYCP3Q8IZU3 236 aa16.87■□□□□ 0.29
CNOT9-205ENST00000433439 USP38Q8NB14 1042 aa16.87■□□□□ 0.29
CNOT9-205ENST00000433439 SEPT8Q92599 483 aa16.87■□□□□ 0.29
CNOT9-205ENST00000433439 CCDC113Q9H0I3 377 aa16.87■□□□□ 0.29
CNOT9-205ENST00000433439 TMEM134Q9H6X4 195 aa16.87■□□□□ 0.29
CNOT9-205ENST00000433439 ERVK-5Q9HDB9 667 aa16.87■□□□□ 0.29
CNOT9-205ENST00000433439 PRMT7Q9NVM4 692 aaPredicted RBP16.87■□□□□ 0.29
CNOT9-205ENST00000433439 TBX20Q9UMR3 447 aa16.87■□□□□ 0.29
CNOT9-205ENST00000433439 PIN4Q9Y237 131 aaKnown RBP16.87■□□□□ 0.29
CNOT9-205ENST00000433439 PCDHB13Q9Y5F0 798 aa16.87■□□□□ 0.29
CNOT9-205ENST00000433439 DNAH12Q6ZR08 3092 aa16.87■□□□□ 0.29
CNOT9-205ENST00000433439 TSPAN1O60635 241 aa16.86■□□□□ 0.29
CNOT9-205ENST00000433439 EDN1P05305 212 aa16.86■□□□□ 0.29
CNOT9-205ENST00000433439 MATR3P43243 847 aaKnown RBP eCLIP16.86■□□□□ 0.295e-14■□□□□ 9.9
CNOT9-205ENST00000433439 SARSP49591 514 aaKnown RBP16.86■□□□□ 0.29
CNOT9-205ENST00000433439 KCNA1Q09470 495 aa16.86■□□□□ 0.29
CNOT9-205ENST00000433439 PPIGQ13427 754 aaKnown RBP eCLIP16.86■□□□□ 0.292e-12■■■□□ 18.1
CNOT9-205ENST00000433439 RPUSD2Q8IZ73 545 aaKnown RBP16.86■□□□□ 0.29
CNOT9-205ENST00000433439 KIAA0895Q8NCT3 520 aa16.86■□□□□ 0.29
CNOT9-205ENST00000433439 TARS2Q9BW92 718 aaKnown RBP16.86■□□□□ 0.29
CNOT9-205ENST00000433439 FZD8Q9H461 694 aa16.86■□□□□ 0.29
CNOT9-205ENST00000433439 SQORQ9Y6N5 450 aa16.86■□□□□ 0.29
CNOT9-205ENST00000433439 TTLL13PA6NNM8 815 aa16.85■□□□□ 0.29
CNOT9-205ENST00000433439 ACKR2O00590 384 aa16.85■□□□□ 0.29
CNOT9-205ENST00000433439 ZSCAN20P17040 1043 aaPredicted RBP16.85■□□□□ 0.29
CNOT9-205ENST00000433439 GTF2BQ00403 316 aa16.85■□□□□ 0.29
CNOT9-205ENST00000433439 ALCAMQ13740 583 aa16.85■□□□□ 0.29
CNOT9-205ENST00000433439 TCTN1Q2MV58 587 aa16.85■□□□□ 0.29
CNOT9-205ENST00000433439 PLEKHG4Q58EX7 1191 aa16.85■□□□□ 0.29
CNOT9-205ENST00000433439 ZNF658Q5TYW1 1059 aaPredicted RBP16.85■□□□□ 0.29
CNOT9-205ENST00000433439 SPATA20Q8TB22 786 aa16.85■□□□□ 0.29
CNOT9-205ENST00000433439 ACCSQ96QU6 501 aa16.85■□□□□ 0.29
CNOT9-205ENST00000433439 MRPL4Q9BYD3 311 aaKnown RBP16.85■□□□□ 0.29
CNOT9-205ENST00000433439 IKZF4Q9H2S9 585 aa16.85■□□□□ 0.29
CNOT9-205ENST00000433439 IL23AQ9NPF7 189 aa16.85■□□□□ 0.29
CNOT9-205ENST00000433439 COLQQ9Y215 455 aaPredicted RBP16.85■□□□□ 0.29
CNOT9-205ENST00000433439 LTBP2Q14767 1821 aa16.84■□□□□ 0.29
CNOT9-205ENST00000433439 H0YGN5 161 aa16.84■□□□□ 0.29
CNOT9-205ENST00000433439 HNRNPDLO14979 420 aaKnown RBP16.84■□□□□ 0.29
CNOT9-205ENST00000433439 PPP1R37O75864 691 aa16.84■□□□□ 0.29
CNOT9-205ENST00000433439 CXCL10P02778 98 aa16.84■□□□□ 0.29
CNOT9-205ENST00000433439 HARSP12081 509 aaKnown RBP16.84■□□□□ 0.29
CNOT9-205ENST00000433439 ARF4P18085 180 aaPredicted RBP16.84■□□□□ 0.29
CNOT9-205ENST00000433439 LIG4P49917 911 aa16.84■□□□□ 0.29
CNOT9-205ENST00000433439 AMHR2Q16671 573 aa16.84■□□□□ 0.29
CNOT9-205ENST00000433439 NT5DC1Q5TFE4 455 aa16.84■□□□□ 0.29
CNOT9-205ENST00000433439 TWF2Q6IBS0 349 aaKnown RBP16.84■□□□□ 0.29
CNOT9-205ENST00000433439 PPP4R3CPQ6ZMV5 832 aa16.84■□□□□ 0.29
CNOT9-205ENST00000433439 MYOCDQ8IZQ8 938 aa16.84■□□□□ 0.29
CNOT9-205ENST00000433439 SCFD1Q8WVM8 642 aa16.84■□□□□ 0.29
CNOT9-205ENST00000433439 TCHPQ9BT92 498 aa16.84■□□□□ 0.29
CNOT9-205ENST00000433439 TMX1Q9H3N1 280 aa16.84■□□□□ 0.29
CNOT9-205ENST00000433439 ST6GALNAC4Q9H4F1 302 aa16.84■□□□□ 0.29
CNOT9-205ENST00000433439 AGPAT5Q9NUQ2 364 aa16.84■□□□□ 0.29
CNOT9-205ENST00000433439 EXOC7Q9UPT5 735 aa16.84■□□□□ 0.29
CNOT9-205ENST00000433439 TET1Q8NFU7 2136 aa16.84■□□□□ 0.29
CNOT9-205ENST00000433439 EIF3DO15371 548 aaKnown RBP eCLIP16.83■□□□□ 0.28
CNOT9-205ENST00000433439 ABCD1P33897 745 aa16.83■□□□□ 0.28
CNOT9-205ENST00000433439 MAGEA10P43363 369 aaPredicted RBP16.83■□□□□ 0.28
CNOT9-205ENST00000433439 EPHB4P54760 987 aa16.83■□□□□ 0.28
CNOT9-205ENST00000433439 MORC3Q14149 939 aa16.83■□□□□ 0.28
CNOT9-205ENST00000433439 FAM187BQ17R55 369 aa16.83■□□□□ 0.28
CNOT9-205ENST00000433439 ATF7IP2Q5U623 682 aa16.83■□□□□ 0.28
CNOT9-205ENST00000433439 EEF1DP3Q658K8 133 aa16.83■□□□□ 0.28
CNOT9-205ENST00000433439 KLHL10Q6JEL2 608 aa16.83■□□□□ 0.28
CNOT9-205ENST00000433439 CNKSR3Q6P9H4 555 aa16.83■□□□□ 0.28
CNOT9-205ENST00000433439 SASS6Q6UVJ0 657 aa16.83■□□□□ 0.28
CNOT9-205ENST00000433439 ZNF365Q70YC5 407 aa16.83■□□□□ 0.28
CNOT9-205ENST00000433439 EPM2AIP1Q7L775 607 aaPredicted RBP16.83■□□□□ 0.28
CNOT9-205ENST00000433439 OTOP2Q7RTS6 562 aa16.83■□□□□ 0.28
CNOT9-205ENST00000433439 ZBTB33Q86T24 672 aa16.83■□□□□ 0.28
CNOT9-205ENST00000433439 MAP4K3Q8IVH8 894 aa16.83■□□□□ 0.28
CNOT9-205ENST00000433439 APBB2Q92870 758 aa16.83■□□□□ 0.28
CNOT9-205ENST00000433439 HVCN1Q96D96 273 aa16.83■□□□□ 0.28
CNOT9-205ENST00000433439 ZBTB45Q96K62 511 aaPredicted RBP16.83■□□□□ 0.28
CNOT9-205ENST00000433439 PRIMPOLQ96LW4 560 aa16.83■□□□□ 0.28
CNOT9-205ENST00000433439 ADAM2Q99965 735 aa16.83■□□□□ 0.28
CNOT9-205ENST00000433439 STRA6Q9BX79 667 aa16.83■□□□□ 0.28
CNOT9-205ENST00000433439 ANKFY1Q9P2R3 1169 aa16.83■□□□□ 0.28
CNOT9-205ENST00000433439 CNTNAP2Q9UHC6 1331 aa16.83■□□□□ 0.28
CNOT9-205ENST00000433439 ZBBXA8MT70 800 aa16.82■□□□□ 0.28
CNOT9-205ENST00000433439 TISP43B9A030 160 aa16.82■□□□□ 0.28
CNOT9-205ENST00000433439 ANKRD63C9JTQ0 380 aa16.82■□□□□ 0.28
CNOT9-205ENST00000433439 TULP1O00294 542 aaPredicted RBP16.82■□□□□ 0.28
CNOT9-205ENST00000433439 MGEA5O60502 916 aa16.82■□□□□ 0.28
CNOT9-205ENST00000433439 KIF20AO95235 890 aa16.82■□□□□ 0.28
CNOT9-205ENST00000433439 NPTXRO95502 500 aa16.82■□□□□ 0.28
CNOT9-205ENST00000433439 FGBP02675 491 aa16.82■□□□□ 0.28
CNOT9-205ENST00000433439 PFKMP08237 780 aa16.82■□□□□ 0.28
CNOT9-205ENST00000433439 ACTN1P12814 892 aa16.82■□□□□ 0.28
CNOT9-205ENST00000433439 SCP2P22307 547 aa16.82■□□□□ 0.28
CNOT9-205ENST00000433439 HOXA11P31270 313 aaPredicted RBP16.82■□□□□ 0.28
CNOT9-205ENST00000433439 PRCPP42785 496 aa16.82■□□□□ 0.28
CNOT9-205ENST00000433439 IKBKEQ14164 716 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms