RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 TMEM8AQ9HCN3 771 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 ABCF3Q9NUQ8 709 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 HESX1Q9UBX0 185 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 MAN1B1Q9UKM7 699 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 ZNF318Q5VUA4 2279 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 A1BGP04217 495 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 ACADSBP45954 432 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 ARCQ7LC44 396 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 C4orf19Q8IY42 314 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 ARHGAP18Q8N392 663 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 EPC1Q9H2F5 836 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 INPP5BP32019 993 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 NOVP48745 357 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 MYL7Q01449 175 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 PPP1R7Q15435 360 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 ANKRD13AQ8IZ07 590 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 EXD1Q8NHP7 514 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 PURBQ96QR8 312 aaKnown RBP4.03□□□□□ -1.76
SHPRH-205ENST00000433355 ASB7Q9H672 318 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 MAFFQ9ULX9 164 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 BIN1O00499 593 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 GUCY1A2P33402 732 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 PIGHQ14442 188 aaPredicted RBP4.03□□□□□ -1.76
SHPRH-205ENST00000433355 SHC4Q6S5L8 630 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 ZNF410Q86VK4 478 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 SUGP1Q8IWZ8 645 aaKnown RBP4.03□□□□□ -1.76
SHPRH-205ENST00000433355 SCFD2Q8WU76 684 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 SLC5A5Q92911 643 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 USP13Q92995 863 aaPredicted RBP4.03□□□□□ -1.76
SHPRH-205ENST00000433355 EPAS1Q99814 870 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 DSEQ9UL01 958 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 DOCK1Q14185 1865 aa4.03□□□□□ -1.76
SHPRH-205ENST00000433355 CXCL11O14625 94 aa4.03□□□□□ -1.77
SHPRH-205ENST00000433355 HNRNPRO43390 633 aaKnown RBP4.03□□□□□ -1.77
SHPRH-205ENST00000433355 MAGEA9P43362 315 aa4.03□□□□□ -1.77
SHPRH-205ENST00000433355 SERPINB9P50453 376 aa4.03□□□□□ -1.77
SHPRH-205ENST00000433355 PDK2Q15119 407 aa4.03□□□□□ -1.77
SHPRH-205ENST00000433355 DALRD3Q5D0E6 543 aaKnown RBP4.03□□□□□ -1.77
SHPRH-205ENST00000433355 PGBD1Q96JS3 809 aa4.03□□□□□ -1.77
SHPRH-205ENST00000433355 CYTH2Q99418 400 aa4.03□□□□□ -1.77
SHPRH-205ENST00000433355 CCT7Q99832 543 aa4.03□□□□□ -1.77
SHPRH-205ENST00000433355 MAGEB5Q9BZ81 275 aa4.03□□□□□ -1.77
SHPRH-205ENST00000433355 CD2APQ9Y5K6 639 aa4.03□□□□□ -1.77
SHPRH-205ENST00000433355 AHCTF1Q8WYP5 2266 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 PLA2G4BP0C869 781 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 ATP11AP98196 1134 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 NCAPHQ15003 741 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 PCNX4Q63HM2 1172 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 TAF2Q6P1X5 1199 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 TRIM65Q6PJ69 517 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 KDM7AQ6ZMT4 941 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 DAAM2Q86T65 1068 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 RELL1Q8IUW5 271 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 TRIM59Q8IWR1 403 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 MAGEB10Q96LZ2 347 aaPredicted RBP4.02□□□□□ -1.77
SHPRH-205ENST00000433355 TMEM60Q9H2L4 133 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 NDUFA13Q9P0J0 144 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 ASAP1Q9ULH1 1129 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 TMCO1Q9UM00 188 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 MAPRE3Q9UPY8 281 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 AP1M2Q9Y6Q5 423 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 ANKRD12Q6UB98 2062 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 KRIT1O00522 736 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 OPLAHO14841 1288 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 TM9SF1O15321 606 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 CES1P23141 567 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 ARL4CP56559 192 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 COASYQ13057 564 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 LRRC55Q6ZSA7 311 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 CENPUQ71F23 418 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 CPLX4Q7Z7G2 160 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 PRUNE1Q86TP1 453 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 RHOT1Q8IXI2 618 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 TC2NQ8N9U0 490 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 MARCH10Q8NA82 808 aaPredicted RBP4.02□□□□□ -1.77
SHPRH-205ENST00000433355 USP33Q8TEY7 942 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 TBC1D31Q96DN5 1066 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 VPS39Q96JC1 886 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 WDR18Q9BV38 432 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 RAB20Q9NX57 234 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 SLC24A2Q9UI40 661 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 FER1L6Q2WGJ9 1857 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 WDR81Q562E7 1941 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 TMEM232C9JQI7 657 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 RNF8O76064 485 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 PDHBP11177 359 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 NR1D1P20393 614 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 AFMP43652 599 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 NR2C2P49116 596 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 XIAPP98170 497 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 ELF2Q15723 593 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 PRR5LQ6MZQ0 368 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 PHKBQ93100 1093 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 LRGUKQ96M69 825 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 EPB41L4AQ9HCS5 686 aaPredicted RBP4.02□□□□□ -1.77
SHPRH-205ENST00000433355 SAMM50Q9Y512 469 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 TNPO2O14787 897 aaKnown RBP4.02□□□□□ -1.77
SHPRH-205ENST00000433355 STRNO43815 780 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 TNFAIP3P21580 790 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 SERPINB5P36952 375 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms