RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 FAM110CQ1W6H9 321 aa13.95□□□□□ -0.18
DDX56-204ENST00000431640 BEND6Q5SZJ8 279 aaPredicted RBP13.95□□□□□ -0.18
DDX56-204ENST00000431640 CCDC181Q5TID7 509 aa13.95□□□□□ -0.18
DDX56-204ENST00000431640 ALKBH5Q6P6C2 394 aaKnown RBP13.95□□□□□ -0.18
DDX56-204ENST00000431640 C17orf99Q6UX52 265 aa13.95□□□□□ -0.18
DDX56-204ENST00000431640 NOA1Q8NC60 698 aaKnown RBP13.95□□□□□ -0.18
DDX56-204ENST00000431640 DNERQ8NFT8 737 aa13.95□□□□□ -0.18
DDX56-204ENST00000431640 SPIRE2Q8WWL2 714 aa13.95□□□□□ -0.18
DDX56-204ENST00000431640 PNKPQ96T60 521 aa13.95□□□□□ -0.18
DDX56-204ENST00000431640 NTPCRQ9BSD7 190 aaKnown RBP13.95□□□□□ -0.18
DDX56-204ENST00000431640 FUT8Q9BYC5 575 aa13.95□□□□□ -0.18
DDX56-204ENST00000431640 NAGPAQ9UK23 515 aa13.95□□□□□ -0.18
DDX56-204ENST00000431640 DNAJC12Q9UKB3 198 aa13.95□□□□□ -0.18
DDX56-204ENST00000431640 PCDHGC5Q9Y5F6 944 aa13.95□□□□□ -0.18
DDX56-204ENST00000431640 HTTP42858 3142 aa13.94□□□□□ -0.18
DDX56-204ENST00000431640 PLXNA1Q9UIW2 1896 aa13.94□□□□□ -0.18
DDX56-204ENST00000431640 A0A0A6YYK5 440 aaPredicted RBP13.94□□□□□ -0.18
DDX56-204ENST00000431640 SPATA31C2B4DYI2 1134 aa13.94□□□□□ -0.18
DDX56-204ENST00000431640 H0YCG3 227 aa13.94□□□□□ -0.18
DDX56-204ENST00000431640 BACH1O14867 736 aa13.94□□□□□ -0.18
DDX56-204ENST00000431640 BUB1O43683 1085 aa13.94□□□□□ -0.18
DDX56-204ENST00000431640 ECM2O94769 699 aaPredicted RBP13.94□□□□□ -0.18
DDX56-204ENST00000431640 SCP2P22307 547 aa13.94□□□□□ -0.18
DDX56-204ENST00000431640 KLRC1P26715 233 aa13.94□□□□□ -0.18
DDX56-204ENST00000431640 PLA2G4AP47712 749 aa13.94□□□□□ -0.18
DDX56-204ENST00000431640 GCLCP48506 637 aaPredicted RBP13.94□□□□□ -0.18
DDX56-204ENST00000431640 VAMP7P51809 220 aa13.94□□□□□ -0.18
DDX56-204ENST00000431640 PEX3P56589 373 aa13.94□□□□□ -0.18
DDX56-204ENST00000431640 MYL7Q01449 175 aa13.94□□□□□ -0.18
DDX56-204ENST00000431640 CNTN2Q02246 1040 aa13.94□□□□□ -0.18
DDX56-204ENST00000431640 ENOX2Q16206 610 aaKnown RBP13.94□□□□□ -0.18
DDX56-204ENST00000431640 CFAP221Q4G0U5 840 aa13.94□□□□□ -0.18
DDX56-204ENST00000431640 FAM102BQ5T8I3 360 aa13.94□□□□□ -0.18
DDX56-204ENST00000431640 GPRC5AQ8NFJ5 357 aa13.94□□□□□ -0.18
DDX56-204ENST00000431640 GTF3C2Q8WUA4 911 aaPredicted RBP13.94□□□□□ -0.18
DDX56-204ENST00000431640 INTS2Q9H0H0 1204 aaKnown RBP13.94□□□□□ -0.18
DDX56-204ENST00000431640 APEX2Q9UBZ4 518 aa13.94□□□□□ -0.18
DDX56-204ENST00000431640 FBXO40Q9UH90 709 aa13.94□□□□□ -0.18
DDX56-204ENST00000431640 SALL4Q9UJQ4 1053 aa13.94□□□□□ -0.18
DDX56-204ENST00000431640 ZNFX1Q9P2E3 1918 aaKnown RBP13.94□□□□□ -0.18
DDX56-204ENST00000431640 CES2O00748 559 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 MAP2K7O14733 419 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 CA12O43570 354 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 EIF3JO75822 258 aaKnown RBP13.93□□□□□ -0.18
DDX56-204ENST00000431640 DGAT1O75907 488 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 TFRCP02786 760 aaKnown RBP13.93□□□□□ -0.18
DDX56-204ENST00000431640 H2AFZP0C0S5 128 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 KCNA2P16389 499 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 NPEPPSP55786 919 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 RTP1P59025 263 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 C1QTNF8P60827 252 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 ENPEPQ07075 957 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 DMP1Q13316 513 aaPredicted RBP13.93□□□□□ -0.18
DDX56-204ENST00000431640 UGCGQ16739 394 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 MEI1Q5TIA1 1274 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 MIS18BP1Q6P0N0 1132 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 H2AFVQ71UI9 128 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 USP37Q86T82 979 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 MCPH1Q8NEM0 835 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 SHCBP1Q8NEM2 672 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 TLR10Q9BXR5 811 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 ACBD3Q9H3P7 528 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 JPH1Q9HDC5 661 aaPredicted RBP13.93□□□□□ -0.18
DDX56-204ENST00000431640 ABCB6Q9NP58 842 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 HSPBP1Q9NZL4 362 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 GABBR1Q9UBS5 961 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 SLC9A2Q9UBY0 812 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 L1RE1Q9UN81 338 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 USP20Q9Y2K6 914 aa13.93□□□□□ -0.18
DDX56-204ENST00000431640 DNAJC25-GNG10A0A024R161 153 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 GRID2IPA4D2P6 1211 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 F8VZ95 297 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 ZNF185O15231 689 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 PALMO75781 387 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 SLC25A27O95847 323 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 PGK2P07205 417 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 HSPA6P17066 643 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 ICAM3P32942 547 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 VSNL1P62760 191 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 DRAP1Q14919 205 aaPredicted RBP13.92□□□□□ -0.18
DDX56-204ENST00000431640 STXBP2Q15833 593 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 GLE1Q53GS7 698 aaKnown RBP13.92□□□□□ -0.18
DDX56-204ENST00000431640 UTP14CQ5TAP6 766 aaKnown RBP13.92□□□□□ -0.18
DDX56-204ENST00000431640 ANO5Q75V66 913 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 RDH13Q8NBN7 331 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 CALR3Q96L12 384 aaKnown RBP13.92□□□□□ -0.18
DDX56-204ENST00000431640 CEP170P1Q96L14 293 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 IKZF4Q9H2S9 585 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 KMT5AQ9NQR1 393 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 TBX20Q9UMR3 447 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 NENFQ9UMX5 172 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 SOWAHBA6NEL2 793 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 CCDC169A6NNP5 214 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 PDE2AO00408 941 aaPredicted RBP13.92□□□□□ -0.18
DDX56-204ENST00000431640 SLC16A4O15374 487 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 EVI5O60447 810 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 CBWD6Q4V339 395 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 CBWD3Q5JTY5 395 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 CBWD5Q5RIA9 395 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 SWSAP1Q6NVH7 229 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms