RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 EPB41L4BQ9H329 900 aa4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 SIRT5Q9NXA8 310 aa4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 VWA7Q9Y334 891 aa4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 PCDHB1Q9Y5F3 818 aa4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 FAM171A2A8MVW0 826 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 H0Y858 1186 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 EIF3JO75822 258 aaKnown RBP4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 LTA4HP09960 611 aaKnown RBP4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 POLD1P28340 1107 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 TM4SF4P48230 202 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 NRG3P56975 720 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 GJA9P57773 515 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 MGAT5Q09328 741 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 BIRC2Q13490 618 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 MAN2A1Q16706 1144 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 VWA3BQ502W6 1294 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 ABHD15Q6UXT9 468 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 TAS1R1Q7RTX1 841 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 C11orf96Q7Z7L8 435 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 CLEC14AQ86T13 490 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 STK32CQ86UX6 486 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 SMC5Q8IY18 1101 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 GRAMD1CQ8IYS0 662 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 FAM156AQ8NDB6 213 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 FNIP1Q8TF40 1166 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 SNX33Q8WV41 574 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 RIN2Q8WYP3 895 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 HDAC10Q969S8 669 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 MRGPRX4Q96LA9 322 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 SAMD11Q96NU1 681 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 NAA15Q9BXJ9 866 aaKnown RBP4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 B3GNT5Q9BYG0 378 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 NSUN3Q9H649 340 aaKnown RBP4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 KCNK12Q9HB15 430 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 FAM53CQ9NYF3 392 aa4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 SAE1Q9UBE0 346 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P27-201ENST00000431429 RPTORQ8N122 1335 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 A0A088AWK7 358 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 PMM2O15305 246 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 SLC16A6O15403 523 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 CYP7B1O75881 506 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 FSBPO95073 299 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 KRT1P04264 644 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 MED14OSP0DP75 135 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 HNRNPLP14866 589 aaKnown RBP eCLIP4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 GSPT1P15170 499 aaKnown RBP4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 XPAP23025 273 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 RPL13P26373 211 aaKnown RBP4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 LIMS1P48059 325 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 ALDH5A1P51649 535 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 NEK3P51956 506 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 MAP2K6P52564 334 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 WNT3AP56704 352 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 FAM193AP78312 1265 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 ADAM8P78325 824 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 DLG4P78352 724 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 NKX6-1P78426 367 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 SMAD4Q13485 552 aaKnown RBP4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 IL10RAQ13651 578 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 MORC3Q14149 939 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 WDR72Q3MJ13 1102 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 ANO6Q4KMQ2 910 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 COBLL1Q53SF7 1204 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 IL31Q6EBC2 164 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 MPZL3Q6UWV2 235 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 NPNTQ6UXI9 565 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 TOGARAM2Q6ZUX3 1019 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 SAPCD2Q86UD0 394 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 REXO1L1PQ8IX06 675 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 SPICE1Q8N0Z3 855 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 KRT78Q8N1N4 520 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 MSL3Q8N5Y2 521 aaKnown RBP4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 PLBD2Q8NHP8 589 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 DPF2Q92785 391 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 AJUBAQ96IF1 538 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 YTHDC1Q96MU7 727 aaKnown RBP4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 WDR92Q96MX6 357 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 DIRC2Q96SL1 478 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 CGRRF1Q99675 332 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 ADI1Q9BV57 179 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 SGPP1Q9BX95 441 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 BHMT2Q9H2M3 363 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 FAM204AQ9H8W3 233 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 DCP1AQ9NPI6 582 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 KLHL11Q9NVR0 708 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 USP25Q9UHP3 1055 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 DNAI1Q9UI46 699 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 MAGEL2Q9UJ55 1249 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 INTUQ9ULD6 942 aa4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 CTDP1Q9Y5B0 961 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P27-201ENST00000431429 SCO2A0A1W2PP80 73 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 SH3D21A4FU49 640 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 MTSS1O43312 755 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 FRS3O43559 492 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 PHF2O75151 1096 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 ENDOD1O94919 500 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 MYBP10242 640 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 GLDCP23378 1020 aa4.02□□□□□ -1.77
HMGB1P27-201ENST00000431429 HTR1BP28222 390 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms