RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 PRMT7Q9NVM4 692 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-207ENST00000430858 HCSTQ9UBK5 93 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 DAXXQ9UER7 740 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-207ENST00000430858 PUF60Q9UHX1 559 aaKnown RBP10.86□□□□□ -0.67
HDAC6-207ENST00000430858 LZTS1Q9Y250 596 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-207ENST00000430858 A0A1B0GUA9 196 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 MEIS3P2A8K0S8 358 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 STX6O43752 255 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 DNAJB1P25685 340 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 LONP1P36776 959 aaKnown RBP10.85□□□□□ -0.67
HDAC6-207ENST00000430858 UBA7P41226 1012 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 ALDH7A1P49419 539 aaKnown RBP10.85□□□□□ -0.67
HDAC6-207ENST00000430858 EFNA5P52803 228 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 TFF2Q03403 129 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 KRT17Q04695 432 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 ZRSR1Q15695 479 aaKnown RBP10.85□□□□□ -0.67
HDAC6-207ENST00000430858 MAPK6Q16659 721 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 LONRF3Q496Y0 759 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 PDE12Q6L8Q7 609 aaKnown RBP10.85□□□□□ -0.67
HDAC6-207ENST00000430858 RINT1Q6NUQ1 792 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 AGMOQ6ZNB7 445 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 CABP7Q86V35 215 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 HACE1Q8IYU2 909 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 URGCPQ8TCY9 931 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 MRPS27Q92552 414 aaKnown RBP10.85□□□□□ -0.67
HDAC6-207ENST00000430858 PABPC5Q96DU9 382 aaKnown RBP10.85□□□□□ -0.67
HDAC6-207ENST00000430858 CPB2Q96IY4 423 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 DRC1Q96MC2 740 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 PNMA5Q96PV4 448 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 TIPINQ9BVW5 301 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 COL25A1Q9BXS0 654 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-207ENST00000430858 EIF2AQ9BY44 585 aaKnown RBP10.85□□□□□ -0.67
HDAC6-207ENST00000430858 TRIM6Q9C030 488 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-207ENST00000430858 UBE2ZQ9H832 354 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-207ENST00000430858 C17orf75Q9HAS0 396 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 TLR9Q9NR96 1032 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 SPG21Q9NZD8 308 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 KCND2Q9NZV8 630 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 KANSL3Q9P2N6 904 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 MTMR6Q9Y217 621 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 IPPQ9Y573 584 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 NLRC5Q86WI3 1866 aa10.85□□□□□ -0.67
HDAC6-207ENST00000430858 ACKR2O00590 384 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 B4GALT5O43286 388 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 HIP1RO75146 1068 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 CSPG5O95196 566 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 HSP90AA1P07900 732 aaKnown RBP10.84□□□□□ -0.67
HDAC6-207ENST00000430858 ITGA4P13612 1032 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 GUCY2CP25092 1073 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 IRS1P35568 1242 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 BCAR1P56945 870 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 RNASELQ05823 741 aaKnown RBP10.84□□□□□ -0.67
HDAC6-207ENST00000430858 COL19A1Q14993 1142 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 PTPAQ15257 358 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 TMEM119Q4V9L6 283 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 SLC27A1Q6PCB7 646 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 C1orf186Q6ZWK4 172 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 KCNK18Q7Z418 384 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 SLC39A11Q8N1S5 342 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 SYT2Q8N9I0 419 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-207ENST00000430858 SMG8Q8ND04 991 aaKnown RBP10.84□□□□□ -0.67
HDAC6-207ENST00000430858 MICAL1Q8TDZ2 1067 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 CALML4Q96GE6 196 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 RUSC1Q9BVN2 902 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 NRDE2Q9H7Z3 1164 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 TBC1D13Q9NVG8 400 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 KCNG1Q9UIX4 513 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 INPP5FQ9Y2H2 1132 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 GIT1Q9Y2X7 761 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 CLIC4Q9Y696 253 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 FNDC1Q4ZHG4 1894 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-207ENST00000430858 PHLPP2Q6ZVD8 1323 aa10.84□□□□□ -0.67
HDAC6-207ENST00000430858 PRUNE2Q8WUY3 3088 aa10.83□□□□□ -0.68
HDAC6-207ENST00000430858 FSCN2O14926 492 aa10.83□□□□□ -0.68
HDAC6-207ENST00000430858 N4BP3O15049 544 aa10.83□□□□□ -0.68
HDAC6-207ENST00000430858 INPPL1O15357 1258 aa10.83□□□□□ -0.68
HDAC6-207ENST00000430858 ZC3H11AO75152 810 aaKnown RBP eCLIP10.83□□□□□ -0.682e-9■■■■■ 49.4
HDAC6-207ENST00000430858 SSBP05455 408 aaKnown RBP eCLIP10.83□□□□□ -0.68
HDAC6-207ENST00000430858 PRKCBP05771 671 aa10.83□□□□□ -0.68
HDAC6-207ENST00000430858 PLA2G4BP0C869 781 aa10.83□□□□□ -0.68
HDAC6-207ENST00000430858 BMP1P13497 986 aa10.83□□□□□ -0.68
HDAC6-207ENST00000430858 KCNA5P22460 613 aa10.83□□□□□ -0.68
HDAC6-207ENST00000430858 PBX3P40426 434 aa10.83□□□□□ -0.68
HDAC6-207ENST00000430858 SLC12A3P55017 1021 aa10.83□□□□□ -0.68
HDAC6-207ENST00000430858 PEX3P56589 373 aa10.83□□□□□ -0.68
HDAC6-207ENST00000430858 GRIN1Q05586 938 aa10.83□□□□□ -0.68
HDAC6-207ENST00000430858 HYAL1Q12794 435 aa10.83□□□□□ -0.68
HDAC6-207ENST00000430858 DMP1Q13316 513 aaPredicted RBP10.83□□□□□ -0.68
HDAC6-207ENST00000430858 PRPF4BQ13523 1007 aaKnown RBP10.83□□□□□ -0.68
HDAC6-207ENST00000430858 LEXMQ3ZCV2 418 aa10.83□□□□□ -0.68
HDAC6-207ENST00000430858 FAM173BQ6P4H8 233 aa10.83□□□□□ -0.68
HDAC6-207ENST00000430858 DAW1Q8N136 415 aa10.83□□□□□ -0.68
HDAC6-207ENST00000430858 TMEM169Q96HH4 297 aa10.83□□□□□ -0.68
HDAC6-207ENST00000430858 PLIN2Q99541 437 aa10.83□□□□□ -0.68
HDAC6-207ENST00000430858 ADPGKQ9BRR6 497 aa10.83□□□□□ -0.68
HDAC6-207ENST00000430858 KIFC3Q9BVG8 833 aa10.83□□□□□ -0.68
HDAC6-207ENST00000430858 CCSER1Q9C0I3 900 aa10.83□□□□□ -0.68
HDAC6-207ENST00000430858 CCDC113Q9H0I3 377 aa10.83□□□□□ -0.68
HDAC6-207ENST00000430858 POLD4Q9HCU8 107 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms