RNA–Protein interactions for RNA: ENST00000430559.5

TNFSF13B-202, Transcript of TNF superfamily member 13b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,614 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-202ENST00000430559 RNF146Q9NTX7 359 aa13.52□□□□□ -0.25
TNFSF13B-202ENST00000430559 GOLGA6AQ9NYA3 693 aa13.52□□□□□ -0.25
TNFSF13B-202ENST00000430559 PIM2Q9P1W9 311 aa13.52□□□□□ -0.25
TNFSF13B-202ENST00000430559 RNF14Q9UBS8 474 aa13.52□□□□□ -0.25
TNFSF13B-202ENST00000430559 DBR1Q9UK59 544 aaKnown RBP13.52□□□□□ -0.25
TNFSF13B-202ENST00000430559 TTI1O43156 1089 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 CHRNB2P17787 502 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 GTF2BQ00403 316 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 GHRHRQ02643 423 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 LLGL1Q15334 1064 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 ARHGEF16Q5VV41 709 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 SLC47A2Q86VL8 602 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 VPS36Q86VN1 386 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 IQCKQ8N0W5 287 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 ACTRT1Q8TDG2 376 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 JDP2Q8WYK2 163 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 LPAR1Q92633 364 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 KRT35Q92764 455 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 ACCSQ96QU6 501 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 TRIM51Q9BSJ1 452 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 POLR2AP24928 1970 aaKnown RBP13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 TMEM110-MUSTN1A8MSY1 372 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 KRIT1O00522 736 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 FGGP02679 453 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 TNFAIP3P21580 790 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 NPTX2P47972 431 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 WNT7BP56706 349 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 PRPF4BQ13523 1007 aaKnown RBP13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 KIF22Q14807 665 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 GLE1Q53GS7 698 aaKnown RBP13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 LMBRD2Q68DH5 695 aaPredicted RBP13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 STXBP4Q6ZWJ1 553 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 NOP9Q86U38 636 aaKnown RBP13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 MCF2L2Q86YR7 1114 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 ZDHHC14Q8IZN3 488 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 XXYLT1Q8NBI6 393 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 TMEM161BQ8NDZ6 487 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 GOLGA5Q8TBA6 731 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 NEK9Q8TD19 979 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 RFFLQ8WZ73 363 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 AGPAT1Q99943 283 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 NCANO14594 1321 aa13.51□□□□□ -0.25
TNFSF13B-202ENST00000430559 PGRMC1O00264 195 aaKnown RBP13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 CYP26A1O43174 497 aa13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 KRT13P13646 458 aa13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 ZNF280AP59817 542 aaPredicted RBP13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 PRKG1Q13976 671 aa13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 HLTFQ14527 1009 aaKnown RBP eCLIP13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 UAP1Q16222 522 aaPredicted RBP13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 SCARA3Q6AZY7 606 aa13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 NIPA1Q7RTP0 329 aa13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 RPUSD2Q8IZ73 545 aaKnown RBP13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 PI4K2AQ9BTU6 479 aa13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 TRIM31Q9BZY9 425 aa13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 CALCOCO1Q9P1Z2 691 aa13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 SUCLA2Q9P2R7 463 aaPredicted RBP13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 GABBR1Q9UBS5 961 aa13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 LCTP09848 1927 aa13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 A0A0A6YYK5 440 aaPredicted RBP13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 DAPK3O43293 454 aa13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 CTNND1O60716 968 aaKnown RBP13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 STBD1O95210 358 aa13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 FTLP02792 175 aaPredicted RBP13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 TMEM253P0C7T8 217 aa13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 LMNB1P20700 586 aa13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 ATP1A2P50993 1020 aa13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 NCKAP1LP55160 1127 aa13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 MKRN4PQ13434 485 aaPredicted RBP13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 SNRNP48Q6IEG0 339 aaKnown RBP13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 INTS8Q75QN2 995 aaKnown RBP13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 C4orf19Q8IY42 314 aa13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 PPM1KQ8N3J5 372 aa13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 RASGEF1CQ8N431 466 aa13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 REPS2Q8NFH8 660 aa13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 CTNNBL1Q8WYA6 563 aaPredicted RBP13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 DPH5Q9H2P9 285 aa13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 CNOT7Q9UIV1 285 aaKnown RBP13.5□□□□□ -0.25
TNFSF13B-202ENST00000430559 DENND3A2RUS2 1198 aa13.49□□□□□ -0.25
TNFSF13B-202ENST00000430559 NR3C2P08235 984 aa13.49□□□□□ -0.25
TNFSF13B-202ENST00000430559 MXI1P50539 228 aa13.49□□□□□ -0.25
TNFSF13B-202ENST00000430559 PSMC5P62195 406 aa13.49□□□□□ -0.25
TNFSF13B-202ENST00000430559 TNNC1P63316 161 aa13.49□□□□□ -0.25
TNFSF13B-202ENST00000430559 PAK2Q13177 524 aa13.49□□□□□ -0.25
TNFSF13B-202ENST00000430559 TNIP1Q15025 636 aa13.49□□□□□ -0.25
TNFSF13B-202ENST00000430559 SNRNP35Q16560 246 aaKnown RBP13.49□□□□□ -0.25
TNFSF13B-202ENST00000430559 CCDC60Q8IWA6 550 aaPredicted RBP13.49□□□□□ -0.25
TNFSF13B-202ENST00000430559 FAM76AQ8TAV0 307 aa13.49□□□□□ -0.25
TNFSF13B-202ENST00000430559 TAS1R2Q8TE23 839 aa13.49□□□□□ -0.25
TNFSF13B-202ENST00000430559 PBKQ96KB5 322 aa13.49□□□□□ -0.25
TNFSF13B-202ENST00000430559 WRNIP1Q96S55 665 aa13.49□□□□□ -0.25
TNFSF13B-202ENST00000430559 XPNPEP1Q9NQW7 623 aa13.49□□□□□ -0.25
TNFSF13B-202ENST00000430559 TBC1D22BQ9NU19 505 aa13.49□□□□□ -0.25
TNFSF13B-202ENST00000430559 TBX20Q9UMR3 447 aa13.49□□□□□ -0.25
TNFSF13B-202ENST00000430559 MYH9P35579 1960 aaKnown RBP13.49□□□□□ -0.25
TNFSF13B-202ENST00000430559 ARID2Q68CP9 1835 aa13.49□□□□□ -0.25
TNFSF13B-202ENST00000430559 BRCA1P38398 1863 aaKnown RBP13.49□□□□□ -0.25
TNFSF13B-202ENST00000430559 GRIN2DO15399 1336 aa13.49□□□□□ -0.25
TNFSF13B-202ENST00000430559 LYPLA2O95372 231 aa13.49□□□□□ -0.25
TNFSF13B-202ENST00000430559 MMEP08473 750 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms