RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 FAM109BQ6ICB4 259 aaPredicted RBP13.71□□□□□ -0.21
USP40-205ENST00000430158 IFT74Q96LB3 600 aa13.71□□□□□ -0.21
USP40-205ENST00000430158 SCLT1Q96NL6 688 aa13.71□□□□□ -0.21
USP40-205ENST00000430158 FTHL17Q9BXU8 183 aa13.71□□□□□ -0.21
USP40-205ENST00000430158 ST6GALNAC4Q9H4F1 302 aa13.71□□□□□ -0.21
USP40-205ENST00000430158 TMEM134Q9H6X4 195 aa13.71□□□□□ -0.21
USP40-205ENST00000430158 PARVGQ9HBI0 331 aa13.71□□□□□ -0.21
USP40-205ENST00000430158 CHST12Q9NRB3 414 aa13.71□□□□□ -0.21
USP40-205ENST00000430158 RGS18Q9NS28 235 aa13.71□□□□□ -0.21
USP40-205ENST00000430158 LMBRD1Q9NUN5 540 aa13.71□□□□□ -0.21
USP40-205ENST00000430158 AGPAT5Q9NUQ2 364 aa13.71□□□□□ -0.21
USP40-205ENST00000430158 PCDHB8Q9UN66 801 aa13.71□□□□□ -0.21
USP40-205ENST00000430158 TRIP11Q15643 1979 aa13.71□□□□□ -0.22
USP40-205ENST00000430158 INO80B-WBP1J3KQ70 363 aa13.7□□□□□ -0.22
USP40-205ENST00000430158 ACKR2O00590 384 aa13.7□□□□□ -0.22
USP40-205ENST00000430158 SLC16A4O15374 487 aa13.7□□□□□ -0.22
USP40-205ENST00000430158 EFCAB14O75071 495 aa13.7□□□□□ -0.22
USP40-205ENST00000430158 PRPF40AO75400 957 aaKnown RBP13.7□□□□□ -0.22
USP40-205ENST00000430158 NR1I2O75469 434 aa13.7□□□□□ -0.22
USP40-205ENST00000430158 ACTN1P12814 892 aa13.7□□□□□ -0.22
USP40-205ENST00000430158 ARF4P18085 180 aaPredicted RBP13.7□□□□□ -0.22
USP40-205ENST00000430158 SFPQP23246 707 aaKnown RBP eCLIP13.7□□□□□ -0.22
USP40-205ENST00000430158 EFNA5P52803 228 aa13.7□□□□□ -0.22
USP40-205ENST00000430158 DMP1Q13316 513 aaPredicted RBP13.7□□□□□ -0.22
USP40-205ENST00000430158 ODR4Q5SWX8 454 aa13.7□□□□□ -0.22
USP40-205ENST00000430158 NT5DC1Q5TFE4 455 aa13.7□□□□□ -0.22
USP40-205ENST00000430158 CATSPER4Q7RTX7 472 aa13.7□□□□□ -0.22
USP40-205ENST00000430158 ZNF598Q86UK7 904 aaKnown RBP13.7□□□□□ -0.22
USP40-205ENST00000430158 SFR1Q86XK3 245 aa13.7□□□□□ -0.22
USP40-205ENST00000430158 MYCT1Q8N699 235 aa13.7□□□□□ -0.22
USP40-205ENST00000430158 DEPTORQ8TB45 409 aa13.7□□□□□ -0.22
USP40-205ENST00000430158 RNPC3Q96LT9 517 aaKnown RBP13.7□□□□□ -0.22
USP40-205ENST00000430158 PRIMPOLQ96LW4 560 aa13.7□□□□□ -0.22
USP40-205ENST00000430158 ADAM2Q99965 735 aa13.7□□□□□ -0.22
USP40-205ENST00000430158 FGFBP2Q9BYJ0 223 aa13.7□□□□□ -0.22
USP40-205ENST00000430158 C2orf40Q9H1Z8 148 aa13.7□□□□□ -0.22
USP40-205ENST00000430158 KMT5AQ9NQR1 393 aa13.7□□□□□ -0.22
USP40-205ENST00000430158 LARSQ9P2J5 1176 aaKnown RBP13.7□□□□□ -0.22
USP40-205ENST00000430158 USP20Q9Y2K6 914 aa13.7□□□□□ -0.22
USP40-205ENST00000430158 FNDC1Q4ZHG4 1894 aaPredicted RBP13.7□□□□□ -0.22
USP40-205ENST00000430158 CHD7Q9P2D1 2997 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 A0A1B0GUA9 196 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 CCDC169A6NNP5 214 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 ABLIM1O14639 778 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 GTPBP6O43824 516 aaPredicted RBP13.69□□□□□ -0.22
USP40-205ENST00000430158 TRAK2O60296 914 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 FAM13AO94988 1023 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 ATF7P17544 494 aaPredicted RBP13.69□□□□□ -0.22
USP40-205ENST00000430158 GAP43P17677 238 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 NMT1P30419 496 aaKnown RBP13.69□□□□□ -0.22
USP40-205ENST00000430158 AFMP43652 599 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 UBE2HP62256 183 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 GTF2BQ00403 316 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 AMPD3Q01432 767 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 DPYDQ12882 1025 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 LRIT3Q3SXY7 679 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 TPRNQ4KMQ1 711 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 ZNF720Q7Z2F6 126 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 HAUS6Q7Z4H7 955 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 ELOA2Q8IYF1 753 aaPredicted RBP13.69□□□□□ -0.22
USP40-205ENST00000430158 PHOSPHO2Q8TCD6 241 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 TOP1MTQ969P6 601 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 TIGD1Q96MW7 591 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 LRRC27Q9C0I9 530 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 BLZF1Q9H2G9 400 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 RC3H2Q9HBD1 1191 aaKnown RBP13.69□□□□□ -0.22
USP40-205ENST00000430158 PTPRHQ9HD43 1115 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 OLFML3Q9NRN5 406 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 RNF19AQ9NV58 838 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 PRMT7Q9NVM4 692 aaPredicted RBP13.69□□□□□ -0.22
USP40-205ENST00000430158 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.69□□□□□ -0.22
USP40-205ENST00000430158 SEL1LQ9UBV2 794 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 KCNG1Q9UIX4 513 aa13.69□□□□□ -0.22
USP40-205ENST00000430158 CNTNAP2Q9UHC6 1331 aa13.68□□□□□ -0.22
USP40-205ENST00000430158 A0A0U1RQF3 1178 aa13.68□□□□□ -0.22
USP40-205ENST00000430158 PVALEFA0A1B0GWK0 134 aa13.68□□□□□ -0.22
USP40-205ENST00000430158 GOLGA6L4A6NEF3 574 aa13.68□□□□□ -0.22
USP40-205ENST00000430158 GRXCR1A8MXD5 290 aa13.68□□□□□ -0.22
USP40-205ENST00000430158 SNPHO15079 494 aa13.68□□□□□ -0.22
USP40-205ENST00000430158 ZNF623O75123 536 aa13.68□□□□□ -0.22
USP40-205ENST00000430158 TBCAO75347 108 aaKnown RBP13.68□□□□□ -0.22
USP40-205ENST00000430158 PRKCBP05771 671 aa13.68□□□□□ -0.22
USP40-205ENST00000430158 KRT18P05783 430 aaKnown RBP13.68□□□□□ -0.22
USP40-205ENST00000430158 MYL1P05976 194 aa13.68□□□□□ -0.22
USP40-205ENST00000430158 AXLP30530 894 aa13.68□□□□□ -0.22
USP40-205ENST00000430158 CASP5P51878 434 aa13.68□□□□□ -0.22
USP40-205ENST00000430158 COASYQ13057 564 aa13.68□□□□□ -0.22
USP40-205ENST00000430158 MAPK6Q16659 721 aa13.68□□□□□ -0.22
USP40-205ENST00000430158 EEF1DP3Q658K8 133 aa13.68□□□□□ -0.22
USP40-205ENST00000430158 UNC13DQ70J99 1090 aa13.68□□□□□ -0.22
USP40-205ENST00000430158 SLC24A5Q71RS6 500 aa13.68□□□□□ -0.22
USP40-205ENST00000430158 EPM2AIP1Q7L775 607 aaPredicted RBP13.68□□□□□ -0.22
USP40-205ENST00000430158 TMCO2Q7Z6W1 182 aaPredicted RBP13.68□□□□□ -0.22
USP40-205ENST00000430158 ZBTB8OSQ8IWT0 167 aa13.68□□□□□ -0.22
USP40-205ENST00000430158 CEP57L1Q8IYX8 460 aa13.68□□□□□ -0.22
USP40-205ENST00000430158 GLIS3Q8NEA6 775 aa13.68□□□□□ -0.22
USP40-205ENST00000430158 SPATA20Q8TB22 786 aa13.68□□□□□ -0.22
USP40-205ENST00000430158 PANK4Q9NVE7 773 aa13.68□□□□□ -0.22
USP40-205ENST00000430158 SLC4A7Q9Y6M7 1214 aa13.68□□□□□ -0.22
USP40-205ENST00000430158 PHLPP2Q6ZVD8 1323 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms