RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 ERICH4A6NGS2 130 aa10.46□□□□□ -0.73
NEDD1-203ENST00000429527 SOX1O00570 391 aaPredicted RBP10.46□□□□□ -0.73
NEDD1-203ENST00000429527 ZNF263O14978 683 aa10.46□□□□□ -0.73
NEDD1-203ENST00000429527 RNF40O75150 1001 aa10.46□□□□□ -0.73
NEDD1-203ENST00000429527 GNA11P29992 359 aa10.46□□□□□ -0.73
NEDD1-203ENST00000429527 HOXA13P31271 388 aaPredicted RBP10.46□□□□□ -0.73
NEDD1-203ENST00000429527 FXR2P51116 673 aaKnown RBP eCLIP10.46□□□□□ -0.73
NEDD1-203ENST00000429527 BFSP2Q13515 415 aa10.46□□□□□ -0.73
NEDD1-203ENST00000429527 DHX37Q8IY37 1157 aaKnown RBP10.46□□□□□ -0.73
NEDD1-203ENST00000429527 RPUSD2Q8IZ73 545 aaKnown RBP10.46□□□□□ -0.73
NEDD1-203ENST00000429527 RDM1Q8NG50 284 aa10.46□□□□□ -0.73
NEDD1-203ENST00000429527 P2RX5Q93086 422 aa10.46□□□□□ -0.73
NEDD1-203ENST00000429527 ANO3Q9BYT9 981 aa10.46□□□□□ -0.73
NEDD1-203ENST00000429527 AGO4Q9HCK5 861 aaKnown RBP10.46□□□□□ -0.73
NEDD1-203ENST00000429527 STK17AQ9UEE5 414 aa10.46□□□□□ -0.73
NEDD1-203ENST00000429527 LCMT1Q9UIC8 334 aa10.46□□□□□ -0.73
NEDD1-203ENST00000429527 PSMA7O14818 248 aa10.46□□□□□ -0.73
NEDD1-203ENST00000429527 EFCAB14O75071 495 aa10.46□□□□□ -0.73
NEDD1-203ENST00000429527 ZCWPW2Q504Y3 356 aa10.46□□□□□ -0.73
NEDD1-203ENST00000429527 BAP1Q92560 729 aa10.46□□□□□ -0.73
NEDD1-203ENST00000429527 TRIM9Q9C026 710 aa10.46□□□□□ -0.73
NEDD1-203ENST00000429527 RCCD1A6NED2 376 aa10.46□□□□□ -0.74
NEDD1-203ENST00000429527 MYL3P08590 195 aa10.46□□□□□ -0.74
NEDD1-203ENST00000429527 TCP1P17987 556 aaKnown RBP10.46□□□□□ -0.74
NEDD1-203ENST00000429527 POU3F3P20264 500 aaPredicted RBP10.46□□□□□ -0.74
NEDD1-203ENST00000429527 EPHB4P54760 987 aa10.46□□□□□ -0.74
NEDD1-203ENST00000429527 UBXN1Q04323 297 aa10.46□□□□□ -0.74
NEDD1-203ENST00000429527 PSMD2Q13200 908 aa10.46□□□□□ -0.74
NEDD1-203ENST00000429527 PTPN21Q16825 1174 aa10.46□□□□□ -0.74
NEDD1-203ENST00000429527 SPDYCQ5MJ68 293 aa10.46□□□□□ -0.74
NEDD1-203ENST00000429527 NUCKS1Q9H1E3 243 aaKnown RBP10.46□□□□□ -0.74
NEDD1-203ENST00000429527 NHEJ1Q9H9Q4 299 aaPredicted RBP10.46□□□□□ -0.74
NEDD1-203ENST00000429527 C6orf50Q9HD87 102 aa10.46□□□□□ -0.74
NEDD1-203ENST00000429527 TAB2Q9NYJ8 693 aa10.46□□□□□ -0.74
NEDD1-203ENST00000429527 VPS18Q9P253 973 aa10.46□□□□□ -0.74
NEDD1-203ENST00000429527 PUF60Q9UHX1 559 aaKnown RBP10.46□□□□□ -0.74
NEDD1-203ENST00000429527 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.45□□□□□ -0.74
NEDD1-203ENST00000429527 GSTTP1A0A1W2PQM5 241 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 PDE2AO00408 941 aaPredicted RBP10.45□□□□□ -0.74
NEDD1-203ENST00000429527 DHX15O43143 795 aaKnown RBP10.45□□□□□ -0.74
NEDD1-203ENST00000429527 GGPS1O95749 300 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 LGALS2P05162 132 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 AFMP43652 599 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 ATN1P54259 1190 aaPredicted RBP10.45□□□□□ -0.74
NEDD1-203ENST00000429527 LRRC63Q05C16 580 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 PPFIA1Q13136 1202 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 STIM1Q13586 685 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 GPNMBQ14956 572 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 SEPT14Q6ZU15 432 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 PPM1EQ8WY54 764 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 JAKMIP2Q96AA8 810 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 MTMR9Q96QG7 549 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 TMEM119Q4V9L6 283 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 USP17L6PQ6QN14 398 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 SMYD4Q8IYR2 804 aaPredicted RBP10.45□□□□□ -0.74
NEDD1-203ENST00000429527 LENG9Q96B70 501 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 NAP1L4Q99733 375 aaKnown RBP10.45□□□□□ -0.74
NEDD1-203ENST00000429527 FAM204AQ9H8W3 233 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 PPME1Q9Y570 386 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 KDM3AQ9Y4C1 1321 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 SMCO2A6NFE2 343 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 SPDYE3A6NKU9 549 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 ADAMTS3O15072 1205 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 PQBP1O60828 265 aaKnown RBP10.45□□□□□ -0.74
NEDD1-203ENST00000429527 RAG1P15918 1043 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 NAPAP54920 295 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 MCCD1P59942 119 aaPredicted RBP10.45□□□□□ -0.74
NEDD1-203ENST00000429527 MGAT3Q09327 533 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 ZNF174Q15697 407 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 CEP55Q53EZ4 464 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 NCAPH2Q6IBW4 605 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 GUF1Q8N442 669 aaKnown RBP10.45□□□□□ -0.74
NEDD1-203ENST00000429527 TUBGCP2Q9BSJ2 902 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 MMTAG2Q9BU76 263 aaKnown RBP10.45□□□□□ -0.74
NEDD1-203ENST00000429527 SELENOOQ9BVL4 669 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 HIPK3Q9H422 1215 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 GDAQ9Y2T3 454 aa10.45□□□□□ -0.74
NEDD1-203ENST00000429527 IQCF3P0C7M6 154 aa10.44□□□□□ -0.74
NEDD1-203ENST00000429527 SYN1P17600 705 aa10.44□□□□□ -0.74
NEDD1-203ENST00000429527 LMAN1P49257 510 aa10.44□□□□□ -0.74
NEDD1-203ENST00000429527 SHHQ15465 462 aa10.44□□□□□ -0.74
NEDD1-203ENST00000429527 GDF6Q6KF10 455 aaPredicted RBP10.44□□□□□ -0.74
NEDD1-203ENST00000429527 DPY19L2P1Q6NXN4 242 aa10.44□□□□□ -0.74
NEDD1-203ENST00000429527 LRRC55Q6ZSA7 311 aa10.44□□□□□ -0.74
NEDD1-203ENST00000429527 EEPD1Q7L9B9 569 aa10.44□□□□□ -0.74
NEDD1-203ENST00000429527 SPATA33Q96N06 139 aa10.44□□□□□ -0.74
NEDD1-203ENST00000429527 LACRTQ9GZZ8 138 aa10.44□□□□□ -0.74
NEDD1-203ENST00000429527 SUGCTQ9HAC7 445 aa10.44□□□□□ -0.74
NEDD1-203ENST00000429527 A0A087WUV0 522 aaPredicted RBP10.44□□□□□ -0.74
NEDD1-203ENST00000429527 CASP1P29466 404 aa10.44□□□□□ -0.74
NEDD1-203ENST00000429527 CDC25AP30304 524 aa10.44□□□□□ -0.74
NEDD1-203ENST00000429527 STAT6P42226 847 aa10.44□□□□□ -0.74
NEDD1-203ENST00000429527 PSMC6P62333 389 aa10.44□□□□□ -0.74
NEDD1-203ENST00000429527 PDIA5Q14554 519 aa10.44□□□□□ -0.74
NEDD1-203ENST00000429527 HSDL1Q3SXM5 330 aa10.44□□□□□ -0.74
NEDD1-203ENST00000429527 HGSNATQ68CP4 663 aa10.44□□□□□ -0.74
NEDD1-203ENST00000429527 ZNF746Q6NUN9 644 aaPredicted RBP10.44□□□□□ -0.74
NEDD1-203ENST00000429527 KRT25Q7Z3Z0 450 aa10.44□□□□□ -0.74
NEDD1-203ENST00000429527 HEATR3Q7Z4Q2 680 aa10.44□□□□□ -0.74
NEDD1-203ENST00000429527 IPO4Q8TEX9 1081 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms