RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 LUZP1Q86V48 1076 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 IFNLR1Q8IU57 520 aaPredicted RBP8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 GOLGA5Q8TBA6 731 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 CAGE1Q8TC20 777 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 ZNF507Q8TCN5 953 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 NOC3LQ8WTT2 800 aaKnown RBP8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 TARS2Q9BW92 718 aaKnown RBP8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 STRA6Q9BX79 667 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 NFKBIZQ9BYH8 718 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 CCDC113Q9H0I3 377 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 GBP3Q9H0R5 595 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 IKZF4Q9H2S9 585 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 SEMA6BQ9H3T3 888 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 TMEM134Q9H6X4 195 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 MINDY3Q9H8M7 445 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 CDHR5Q9HBB8 845 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 IFT122Q9HBG6 1241 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 TYW1Q9NV66 732 aaKnown RBP8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 ANKFY1Q9P2R3 1169 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 RWDD2AQ9UIY3 292 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 USP20Q9Y2K6 914 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 CNTNAP2Q9UHC6 1331 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 CCDC85CA6NKD9 419 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 TISP43B9A030 160 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 GOLGA6L19H0YKK7 550 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 B4GALT5O43286 388 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 CD4P01730 458 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 CHRNA1P02708 482 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 NR3C1P04150 777 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 CLTBP09497 229 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 GHRP10912 638 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 CKBP12277 381 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 SELPP16109 830 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 FGFR4P22455 802 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 MYH9P35579 1960 aaKnown RBP8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 CYP2J2P51589 502 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 PMS1P54277 932 aaKnown RBP8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 TPM4P67936 248 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 POU5F1BQ06416 359 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 NCBP1Q09161 790 aaKnown RBP8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 MGAT3Q09327 533 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 PAK2Q13177 524 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 ZCWPW2Q504Y3 356 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 ZNF618Q5T7W0 954 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 C1orf53Q5VUE5 145 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 ANKRD40Q6AI12 368 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 TTI2Q6NXR4 508 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 ARMCX5Q6P1M9 558 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 PPP4R3CPQ6ZMV5 832 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 LRRC8DQ7L1W4 858 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 CSGALNACT2Q8N6G5 542 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 TMEM40Q8WWA1 233 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 TOX2Q96NM4 488 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 BPIFA3Q9BQP9 254 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 PPP1R12CQ9BZL4 782 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 KCTD10Q9H3F6 313 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 HIPK3Q9H422 1215 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 CBX8Q9HC52 389 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 PRDM5Q9NQX1 630 aaPredicted RBP8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 AGPAT3Q9NRZ7 376 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 NFE2L3Q9Y4A8 694 aa8.67□□□□□ -1.02
HMGA1P4-201ENST00000428643 SMTNL1A8MU46 457 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 TULP1O00294 542 aaPredicted RBP8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 PITPNM1O00562 1244 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 ACKR2O00590 384 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 PDXKO00764 312 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 CLIC2O15247 247 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 TGFB1I1O43294 461 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 TSPAN1O60635 241 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 RPS6KA5O75582 802 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 FGFR1OPO95684 399 aaKnown RBP8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 PIGRP01833 764 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 EDN1P05305 212 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 IQCF3P0C7M6 154 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 NR2F2P24468 414 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 RPL13P26373 211 aaKnown RBP8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 RBL2Q08999 1139 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 FAAP100Q0VG06 881 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 NFX1Q12986 1120 aaKnown RBP8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 PCBP1Q15365 356 aaKnown RBP eCLIP8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 AMHR2Q16671 573 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 FAM187BQ17R55 369 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 EDRF1Q3B7T1 1238 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 ZNF568Q3ZCX4 644 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 FAM26DQ5JW98 314 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 ATF7IP2Q5U623 682 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 SPATA1Q5VX52 437 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 CENPPQ6IPU0 288 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 ZPBP2Q6X784 338 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 TSHZ1Q6ZSZ6 1077 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 UBE2Q1Q7Z7E8 422 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 ZBTB33Q86T24 672 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 FAM228AQ86W67 206 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 GAS2L3Q86XJ1 694 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 DHX40Q8IX18 779 aaKnown RBP8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 ENOX1Q8TC92 643 aaKnown RBP8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 POMGNT1Q8WZA1 660 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 KCNN1Q92952 543 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 EEF2KMTQ96G04 330 aa8.66□□□□□ -1.02
HMGA1P4-201ENST00000428643 CPB2Q96IY4 423 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms