RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 WEE2P0C1S8 567 aa17.32■□□□□ 0.36
SEC13-210ENST00000428626 SKIP12755 728 aa17.32■□□□□ 0.36
SEC13-210ENST00000428626 ZXDAP98168 799 aa17.32■□□□□ 0.36
SEC13-210ENST00000428626 TRIM67Q6ZTA4 783 aa17.32■□□□□ 0.36
SEC13-210ENST00000428626 DDX53Q86TM3 631 aaKnown RBP17.32■□□□□ 0.36
SEC13-210ENST00000428626 C12orf76Q8N812 135 aaPredicted RBP17.32■□□□□ 0.36
SEC13-210ENST00000428626 ASAP3Q8TDY4 903 aa17.32■□□□□ 0.36
SEC13-210ENST00000428626 FBXL18Q96ME1 805 aa17.32■□□□□ 0.36
SEC13-210ENST00000428626 MTMR9Q96QG7 549 aa17.32■□□□□ 0.36
SEC13-210ENST00000428626 EIF2AQ9BY44 585 aaKnown RBP17.32■□□□□ 0.36
SEC13-210ENST00000428626 TMEM60Q9H2L4 133 aa17.32■□□□□ 0.36
SEC13-210ENST00000428626 RNF39Q9H2S5 420 aa17.32■□□□□ 0.36
SEC13-210ENST00000428626 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.31■□□□□ 0.36
SEC13-210ENST00000428626 TSPAN1O60635 241 aa17.31■□□□□ 0.36
SEC13-210ENST00000428626 LYPLA2O95372 231 aa17.31■□□□□ 0.36
SEC13-210ENST00000428626 BAG4O95429 457 aaKnown RBP17.31■□□□□ 0.36
SEC13-210ENST00000428626 CTSAP10619 480 aa17.31■□□□□ 0.36
SEC13-210ENST00000428626 EPCAMP16422 314 aa17.31■□□□□ 0.36
SEC13-210ENST00000428626 HOXB8P17481 243 aaPredicted RBP17.31■□□□□ 0.36
SEC13-210ENST00000428626 PTENP60484 403 aa17.31■□□□□ 0.36
SEC13-210ENST00000428626 CALCRLQ16602 461 aa17.31■□□□□ 0.36
SEC13-210ENST00000428626 AMHR2Q16671 573 aa17.31■□□□□ 0.36
SEC13-210ENST00000428626 OTUD6AQ7L8S5 288 aa17.31■□□□□ 0.36
SEC13-210ENST00000428626 CASP10Q92851 521 aa17.31■□□□□ 0.36
SEC13-210ENST00000428626 MTRQ99707 1265 aa17.31■□□□□ 0.36
SEC13-210ENST00000428626 POMKQ9H5K3 350 aa17.31■□□□□ 0.36
SEC13-210ENST00000428626 TTC12Q9H892 705 aaPredicted RBP17.31■□□□□ 0.36
SEC13-210ENST00000428626 RSAD1Q9HA92 442 aa17.31■□□□□ 0.36
SEC13-210ENST00000428626 PCDHA12Q9UN75 941 aa17.31■□□□□ 0.36
SEC13-210ENST00000428626 IRAK3Q9Y616 596 aa17.31■□□□□ 0.36
SEC13-210ENST00000428626 TMEM221A6NGB7 291 aa17.3■□□□□ 0.36
SEC13-210ENST00000428626 POTEMA6NI47 508 aa17.3■□□□□ 0.36
SEC13-210ENST00000428626 M0R296 226 aa17.3■□□□□ 0.36
SEC13-210ENST00000428626 GAS2O43903 313 aaKnown RBP17.3■□□□□ 0.36
SEC13-210ENST00000428626 POMCP01189 267 aa17.3■□□□□ 0.36
SEC13-210ENST00000428626 SRGAP2BP0DMP2 458 aa17.3■□□□□ 0.36
SEC13-210ENST00000428626 CA8P35219 290 aa17.3■□□□□ 0.36
SEC13-210ENST00000428626 TXKP42681 527 aa17.3■□□□□ 0.36
SEC13-210ENST00000428626 RNASELQ05823 741 aaKnown RBP17.3■□□□□ 0.36
SEC13-210ENST00000428626 CAPSQ13938 189 aa17.3■□□□□ 0.36
SEC13-210ENST00000428626 PTPN14Q15678 1187 aa17.3■□□□□ 0.36
SEC13-210ENST00000428626 EXOC8Q8IYI6 725 aa17.3■□□□□ 0.36
SEC13-210ENST00000428626 PIGOQ8TEQ8 1089 aa17.3■□□□□ 0.36
SEC13-210ENST00000428626 SLC22A17Q8WUG5 538 aa17.3■□□□□ 0.36
SEC13-210ENST00000428626 TCP11Q8WWU5 503 aa17.3■□□□□ 0.36
SEC13-210ENST00000428626 RSPH1Q8WYR4 309 aa17.3■□□□□ 0.36
SEC13-210ENST00000428626 PGBD4Q96DM1 585 aa17.3■□□□□ 0.36
SEC13-210ENST00000428626 CPB2Q96IY4 423 aa17.3■□□□□ 0.36
SEC13-210ENST00000428626 ADAM7Q9H2U9 754 aa17.3■□□□□ 0.36
SEC13-210ENST00000428626 HES2Q9Y543 173 aa17.3■□□□□ 0.36
SEC13-210ENST00000428626 ASAP2O43150 1006 aa17.29■□□□□ 0.36
SEC13-210ENST00000428626 NEMFO60524 1076 aa17.29■□□□□ 0.36
SEC13-210ENST00000428626 SPATA31C1P0DKV0 1188 aa17.29■□□□□ 0.36
SEC13-210ENST00000428626 NCLP19338 710 aaKnown RBP17.29■□□□□ 0.36
SEC13-210ENST00000428626 GLRA2P23416 452 aa17.29■□□□□ 0.36
SEC13-210ENST00000428626 ARL2P36404 184 aa17.29■□□□□ 0.36
SEC13-210ENST00000428626 RARRES1P49788 294 aa17.29■□□□□ 0.36
SEC13-210ENST00000428626 GUCY1B3Q02153 619 aa17.29■□□□□ 0.36
SEC13-210ENST00000428626 MBTD1Q05BQ5 628 aa17.29■□□□□ 0.36
SEC13-210ENST00000428626 BMP8AQ7Z5Y6 402 aa17.29■□□□□ 0.36
SEC13-210ENST00000428626 IFNLR1Q8IU57 520 aaPredicted RBP17.29■□□□□ 0.36
SEC13-210ENST00000428626 ASIC4Q96FT7 647 aa17.29■□□□□ 0.36
SEC13-210ENST00000428626 BRMS1Q9HCU9 246 aa17.29■□□□□ 0.36
SEC13-210ENST00000428626 MARCH5Q9NX47 278 aa17.29■□□□□ 0.36
SEC13-210ENST00000428626 MIOSQ9NXC5 875 aa17.29■□□□□ 0.36
SEC13-210ENST00000428626 IPPQ9Y573 584 aa17.29■□□□□ 0.36
SEC13-210ENST00000428626 F8W810 466 aa17.28■□□□□ 0.36
SEC13-210ENST00000428626 B4GALT5O43286 388 aa17.28■□□□□ 0.36
SEC13-210ENST00000428626 LILRB3O75022 631 aa17.28■□□□□ 0.36
SEC13-210ENST00000428626 RARS2Q5T160 578 aaKnown RBP17.28■□□□□ 0.36
SEC13-210ENST00000428626 IER5LQ5T953 404 aa17.28■□□□□ 0.36
SEC13-210ENST00000428626 CDR2LQ86X02 465 aaPredicted RBP17.28■□□□□ 0.36
SEC13-210ENST00000428626 GPRC5CQ9NQ84 441 aa17.28■□□□□ 0.36
SEC13-210ENST00000428626 ANKEF1Q9NU02 776 aa17.28■□□□□ 0.36
SEC13-210ENST00000428626 CNTNAP2Q9UHC6 1331 aa17.27■□□□□ 0.36
SEC13-210ENST00000428626 KMT2EQ8IZD2 1858 aa17.27■□□□□ 0.36
SEC13-210ENST00000428626 C2CD4DB7Z1M9 353 aa17.27■□□□□ 0.36
SEC13-210ENST00000428626 INO80B-WBP1J3KQ70 363 aa17.27■□□□□ 0.36
SEC13-210ENST00000428626 NRP1O14786 923 aa17.27■□□□□ 0.36
SEC13-210ENST00000428626 INPPL1O15357 1258 aa17.27■□□□□ 0.36
SEC13-210ENST00000428626 DGAT1O75907 488 aa17.27■□□□□ 0.36
SEC13-210ENST00000428626 EFEMP2O95967 443 aa17.27■□□□□ 0.36
SEC13-210ENST00000428626 SSBP05455 408 aaKnown RBP eCLIP17.27■□□□□ 0.36
SEC13-210ENST00000428626 ARF4P18085 180 aaPredicted RBP17.27■□□□□ 0.36
SEC13-210ENST00000428626 ATP2B1P20020 1258 aa17.27■□□□□ 0.36
SEC13-210ENST00000428626 NHLH1Q02575 133 aa17.27■□□□□ 0.36
SEC13-210ENST00000428626 MXD4Q14582 209 aaPredicted RBP17.27■□□□□ 0.36
SEC13-210ENST00000428626 PTPN21Q16825 1174 aa17.27■□□□□ 0.36
SEC13-210ENST00000428626 TPRNQ4KMQ1 711 aa17.27■□□□□ 0.36
SEC13-210ENST00000428626 TAS1R1Q7RTX1 841 aa17.27■□□□□ 0.36
SEC13-210ENST00000428626 COLGALT2Q8IYK4 626 aa17.27■□□□□ 0.36
SEC13-210ENST00000428626 URGCPQ8TCY9 931 aa17.27■□□□□ 0.36
SEC13-210ENST00000428626 PBXIP1Q96AQ6 731 aa17.27■□□□□ 0.36
SEC13-210ENST00000428626 MFSD14AQ96MC6 490 aa17.27■□□□□ 0.36
SEC13-210ENST00000428626 ZFP42Q96MM3 310 aa17.27■□□□□ 0.36
SEC13-210ENST00000428626 GAD1Q99259 594 aa17.27■□□□□ 0.36
SEC13-210ENST00000428626 ARL5CA6NH57 179 aa17.26■□□□□ 0.35
SEC13-210ENST00000428626 USO1O60763 962 aaKnown RBP17.26■□□□□ 0.35
SEC13-210ENST00000428626 MED24O75448 989 aa17.26■□□□□ 0.35
SEC13-210ENST00000428626 ERLIN2O94905 339 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms