RNA–Protein interactions for RNA: ENST00000428557.1

AC006001.2-203, humanhuman

TSL 3

Gene AC006001.2, Length 304 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.2-203ENST00000428557 TCF25Q9BQ70 676 aa13.13□□□□□ -0.31
AC006001.2-203ENST00000428557 APOL6Q9BWW8 343 aa13.13□□□□□ -0.31
AC006001.2-203ENST00000428557 EIF2AQ9BY44 585 aaKnown RBP13.13□□□□□ -0.31
AC006001.2-203ENST00000428557 TRIM6Q9C030 488 aaPredicted RBP13.13□□□□□ -0.31
AC006001.2-203ENST00000428557 RSAD1Q9HA92 442 aa13.13□□□□□ -0.31
AC006001.2-203ENST00000428557 TBC1D13Q9NVG8 400 aa13.13□□□□□ -0.31
AC006001.2-203ENST00000428557 DNM3Q9UQ16 869 aa13.13□□□□□ -0.31
AC006001.2-203ENST00000428557 TTC3P53804 2025 aa13.13□□□□□ -0.31
AC006001.2-203ENST00000428557 GRXCR2A6NFK2 248 aa13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 POMCP01189 267 aa13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 IL9P15248 144 aa13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 ARF4P18085 180 aaPredicted RBP13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 LTBRP36941 435 aa13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 PRPHP41219 470 aa13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 COL19A1Q14993 1142 aa13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 CTC1Q2NKJ3 1217 aa13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 PDE12Q6L8Q7 609 aaKnown RBP13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 CDR2LQ86X02 465 aaPredicted RBP13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 ZNF280BQ86YH2 543 aa13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 IFNLR1Q8IU57 520 aaPredicted RBP13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 ZBTB8OSQ8IWT0 167 aa13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 SLC39A11Q8N1S5 342 aa13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 SMG8Q8ND04 991 aaKnown RBP13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 DEPTORQ8TB45 409 aa13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 BSNDQ8WZ55 320 aa13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 FAM193BQ96PV7 902 aaPredicted RBP13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 NFKBIZQ9BYH8 718 aa13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 CSRNP2Q9H175 543 aa13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 RNF39Q9H2S5 420 aa13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 NRDE2Q9H7Z3 1164 aa13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 LZTS1Q9Y250 596 aa13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 HES2Q9Y543 173 aa13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 IPPQ9Y573 584 aa13.12□□□□□ -0.31
AC006001.2-203ENST00000428557 VPS37CA5D8V6 355 aaPredicted RBP13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 VWA3AA6NCI4 1184 aa13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 E9PMD0 336 aa13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 FSCN2O14926 492 aa13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 NPTXRO95502 500 aa13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 NCLP19338 710 aaKnown RBP13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 SSTR3P32745 418 aaPredicted RBP13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 AFF1P51825 1210 aaKnown RBP13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 ATP2C1P98194 919 aaPredicted RBP13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 CUL4AQ13619 759 aa13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 AMHR2Q16671 573 aa13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 EFHBQ8N7U6 833 aa13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 CNNM3Q8NE01 707 aa13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 RSPH1Q8WYR4 309 aa13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 CCDC51Q96ER9 411 aa13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 TMEM169Q96HH4 297 aa13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 IFT74Q96LB3 600 aa13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 PLIN2Q99541 437 aa13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 C2orf40Q9H1Z8 148 aa13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 NGRNQ9NPE2 291 aaKnown RBP13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 UBN1Q9NPG3 1134 aa13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 FOXD4L1Q9NU39 408 aa13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 KANSL3Q9P2N6 904 aa13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 DNAJB4Q9UDY4 337 aa13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 FAM50BQ9Y247 325 aa13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 UNC80Q8N2C7 3258 aa13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 COL4A4P53420 1690 aaPredicted RBP13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 PRUNE2Q8WUY3 3088 aa13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 CNTNAP2Q9UHC6 1331 aa13.11□□□□□ -0.31
AC006001.2-203ENST00000428557 HIDE1A8MVS5 230 aa13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 TBX10O75333 385 aa13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 EYA4O95677 639 aa13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 CXCL14O95715 111 aa13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 SSBP05455 408 aaKnown RBP eCLIP13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 GALTP07902 379 aa13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 SLC11A1P49279 550 aa13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 RBM10P98175 930 aaKnown RBP13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 BMS1Q14692 1282 aaKnown RBP13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 PPP2R5AQ15172 486 aa13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 LLGL2Q6P1M3 1020 aa13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 SLC27A1Q6PCB7 646 aa13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 HACE1Q8IYU2 909 aa13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 VPS52Q8N1B4 723 aa13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 TMEM87AQ8NBN3 555 aa13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 KIFAP3Q92845 792 aa13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 GAD1Q99259 594 aa13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 MMTAG2Q9BU76 263 aaKnown RBP13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 KIFC3Q9BVG8 833 aa13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 NXF3Q9H4D5 531 aaKnown RBP13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 PRMT7Q9NVM4 692 aaPredicted RBP13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 PARP2Q9UGN5 583 aa13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 CD207Q9UJ71 328 aa13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 BARX2Q9UMQ3 279 aaPredicted RBP13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 USP20Q9Y2K6 914 aa13.1□□□□□ -0.31
AC006001.2-203ENST00000428557 A0A1B0GUA9 196 aa13.09□□□□□ -0.31
AC006001.2-203ENST00000428557 ARL5CA6NH57 179 aa13.09□□□□□ -0.31
AC006001.2-203ENST00000428557 CCDC169A6NNP5 214 aa13.09□□□□□ -0.31
AC006001.2-203ENST00000428557 B4GALT3O60512 393 aa13.09□□□□□ -0.31
AC006001.2-203ENST00000428557 DDHD2O94830 711 aa13.09□□□□□ -0.31
AC006001.2-203ENST00000428557 ALDH2P05091 517 aa13.09□□□□□ -0.31
AC006001.2-203ENST00000428557 PRKCBP05771 671 aa13.09□□□□□ -0.31
AC006001.2-203ENST00000428557 PDCP20941 246 aa13.09□□□□□ -0.31
AC006001.2-203ENST00000428557 AKAP5P24588 427 aa13.09□□□□□ -0.31
AC006001.2-203ENST00000428557 MLH1P40692 756 aa13.09□□□□□ -0.31
AC006001.2-203ENST00000428557 NAMPTP43490 491 aa13.09□□□□□ -0.31
AC006001.2-203ENST00000428557 PRPF4BQ13523 1007 aaKnown RBP13.09□□□□□ -0.31
AC006001.2-203ENST00000428557 SMC1AQ14683 1233 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms