RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 PCDHA2Q9Y5H9 948 aa11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 CICQ96RK0 1608 aaPredicted RBP11.56□□□□□ -0.56
ATP2C1-204ENST00000428331 PPP1R12AO14974 1030 aaPredicted RBP11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 KCNQ4P56696 695 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 SATB1Q01826 763 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 LLGL1Q15334 1064 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 CNGA2Q16280 664 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 RNF207Q6ZRF8 634 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 RSPH10B2B2RC85 870 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 RSPH10BP0C881 870 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 COMTP21964 271 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 MSH2P43246 934 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 PSMC6P62333 389 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 CAV1Q03135 178 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 SPRED3Q2MJR0 410 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 ARSHQ5FYA8 562 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 CCDC174Q6PII3 467 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 RPUSD2Q8IZ73 545 aaKnown RBP11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 PPM1KQ8N3J5 372 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 AGAP11Q8TF27 550 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 ATP2A1O14983 1001 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 KCNJ1P48048 391 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 RBM5P52756 815 aaKnown RBP eCLIP11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 KLRC3Q07444 240 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 USP37Q86T82 979 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 EIF2AK1Q9BQI3 630 aaKnown RBP11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 LARSQ9P2J5 1176 aaKnown RBP11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 DDX3YO15523 660 aaKnown RBP11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 GAS7O60861 476 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 RTN2O75298 545 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 KRT15P19012 456 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 ALDH5A1P51649 535 aaPredicted RBP11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 AUHQ13825 339 aaKnown RBP11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 CTTNQ14247 550 aaKnown RBP11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 C11orf63Q6NUN7 778 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 SLC13A5Q86YT5 568 aaPredicted RBP11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 SRRM1Q8IYB3 904 aaKnown RBP11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 KCTD17Q8N5Z5 321 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 ARHGEF26Q96DR7 871 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 TMEM109Q9BVC6 243 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 PCYOX1Q9UHG3 505 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 SLC12A4Q9UP95 1085 aa11.55□□□□□ -0.56
ATP2C1-204ENST00000428331 ITIH2P19823 946 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 JAM2P57087 298 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 ADCY1Q08828 1119 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 ZNF746Q6NUN9 644 aaPredicted RBP11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 NACC1Q96RE7 527 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 KCNMB3Q9NPA1 279 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 OLFML3Q9NRN5 406 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 ZDHHC18Q9NUE0 388 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 DNAJC17Q9NVM6 304 aaKnown RBP11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 AFF2P51816 1311 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 MAPK13O15264 365 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 ZNF268Q14587 947 aaPredicted RBP11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 ACCSLQ4AC99 568 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 HHATQ5VTY9 493 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 ZC3H3Q8IXZ2 948 aaKnown RBP11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 ZNF564Q8TBZ8 553 aaPredicted RBP11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 ATP8B4Q8TF62 1192 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 FOXN3O00409 490 aaPredicted RBP11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 RPS6KA4O75676 772 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 PPATQ06203 517 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 GRIK5Q16478 980 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 FYB2Q5VWT5 728 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 ALG3Q92685 438 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 RXFP1Q9HBX9 757 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 ERVK-5Q9HDB9 667 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 RGL1Q9NZL6 768 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 LRRD1A4D1F6 860 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 CDH16O75309 829 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 KCNJ2P63252 427 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 KRT17Q04695 432 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 FAM47EQ6ZV65 393 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 PRELID2Q8N945 189 aa11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 THRAP3Q9Y2W1 955 aaKnown RBP11.54□□□□□ -0.56
ATP2C1-204ENST00000428331 ARAP2Q8WZ64 1704 aa11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 K7ENM7 598 aa11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 FAM228AQ86W67 206 aa11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 SNF8Q96H20 258 aa11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 RUSC1Q9BVN2 902 aa11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 ZC3H12CQ9C0D7 883 aaKnown RBP11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 CDC42EP4Q9H3Q1 356 aaKnown RBP11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 PAPPAQ13219 1627 aa11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 MFAP3P55082 362 aa11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 NCALDP61601 193 aa11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 BFSP1Q12934 665 aa11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 CACNA1SQ13698 1873 aa11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 BMT2Q1RMZ1 405 aa11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 ZC2HC1CQ53FD0 456 aaPredicted RBP11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 EPM2AIP1Q7L775 607 aaPredicted RBP11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 LRRC8CQ8TDW0 803 aa11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 RBM17Q96I25 401 aaKnown RBP11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 POLR3CQ9BUI4 534 aaPredicted RBP11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 NUP85Q9BW27 656 aa11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 VCXQ9H320 206 aa11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 CCDC134Q9H6E4 229 aa11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 RASA4BC9J798 803 aa11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 RASA4O43374 803 aa11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 EEF2P13639 858 aaKnown RBP11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 NFIXQ14938 502 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms