RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 TCEA3O75764 348 aa17.25■□□□□ 0.35
C9orf3-206ENST00000428313 ALAS1P13196 640 aa17.25■□□□□ 0.35
C9orf3-206ENST00000428313 IFIT5Q13325 482 aaKnown RBP17.25■□□□□ 0.35
C9orf3-206ENST00000428313 TXNRD1Q16881 649 aa17.25■□□□□ 0.35
C9orf3-206ENST00000428313 RGS9BPQ6ZS82 235 aa17.25■□□□□ 0.35
C9orf3-206ENST00000428313 SV2BQ7L1I2 683 aa17.25■□□□□ 0.35
C9orf3-206ENST00000428313 CYFIP1Q7L576 1253 aa17.25■□□□□ 0.35
C9orf3-206ENST00000428313 HS2ST1Q7LGA3 356 aa17.25■□□□□ 0.35
C9orf3-206ENST00000428313 ZBTB8BQ8NAP8 495 aaPredicted RBP17.25■□□□□ 0.35
C9orf3-206ENST00000428313 ZNF653Q96CK0 615 aa17.25■□□□□ 0.35
C9orf3-206ENST00000428313 SPZ1Q9BXG8 430 aa17.25■□□□□ 0.35
C9orf3-206ENST00000428313 RHBDL2Q9NX52 303 aa17.25■□□□□ 0.35
C9orf3-206ENST00000428313 NCANO14594 1321 aa17.25■□□□□ 0.35
C9orf3-206ENST00000428313 UBTFL6P0CB48 400 aaPredicted RBP17.24■□□□□ 0.35
C9orf3-206ENST00000428313 FOXN2P32314 431 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 MPP3Q13368 585 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 TMED1Q13445 227 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 RASA3Q14644 834 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 ZCWPW2Q504Y3 356 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 ESCO1Q5FWF5 840 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 ZNF449Q6P9G9 518 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 VPS36Q86VN1 386 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 TRIM59Q8IWR1 403 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 IFNL2Q8IZJ0 200 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 ST13P4Q8IZP2 240 aaPredicted RBP17.24■□□□□ 0.35
C9orf3-206ENST00000428313 TTLL11Q8NHH1 800 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 C7orf43Q8WVR3 580 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 MAF1Q9H063 256 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 RMI1Q9H9A7 625 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 HSFX1Q9UBD0 423 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 LGALS13Q9UHV8 139 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 ANKRD36CQ5JPF3 1778 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 BTBD19C9JJ37 291 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 TBX10O75333 385 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 KRT36O76013 467 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 CSF1RP07333 972 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 TMEM259Q4ZIN3 620 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 SLC45A4Q5BKX6 768 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 KLC3Q6P597 504 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 LCORLQ8N3X6 602 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 SMYD1Q8NB12 490 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 CATSPER2Q96P56 530 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 YIPF2Q9BWQ6 316 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 KRT82Q9NSB4 513 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 NDUFA13Q9P0J0 144 aa17.24■□□□□ 0.35
C9orf3-206ENST00000428313 CBX6O95503 412 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 SPATA31D3P0C874 917 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 EIF4BP23588 611 aaKnown RBP17.23■□□□□ 0.35
C9orf3-206ENST00000428313 ACSBG2Q5FVE4 666 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 RFWD3Q6PCD5 774 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 SPATA31D4Q6ZUB0 917 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 DAGLBQ8NCG7 672 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 CTNNBL1Q8WYA6 563 aaPredicted RBP17.23■□□□□ 0.35
C9orf3-206ENST00000428313 CALML4Q96GE6 196 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 DCAF5Q96JK2 942 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 TUBB6Q9BUF5 446 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 EPB41L1Q9H4G0 881 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 STK17AQ9UEE5 414 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 RGPD5Q99666 1765 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 SMIM31A0A1B0GVY4 71 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 NBPF26B4DH59 902 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 RAD21O60216 631 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 ZWINTO95229 277 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 OR52Z1P0C646 297 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 VAV1P15498 845 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 PHKA1P46020 1223 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 HPCAP84074 193 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 CBX3Q13185 183 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 GALNT17Q6IS24 598 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 PHLDB3Q6NSJ2 640 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 SPATA24Q86W54 205 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 VGLL2Q8N8G2 317 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 C10orf82Q8WW14 230 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 STMN2Q93045 179 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 TUBGCP5Q96RT8 1024 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 MIPEPQ99797 713 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 CADM1Q9BY67 442 aaKnown RBP17.23■□□□□ 0.35
C9orf3-206ENST00000428313 PCDH18Q9HCL0 1135 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 ETNK2Q9NVF9 386 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 PHTF1Q9UMS5 762 aa17.23■□□□□ 0.35
C9orf3-206ENST00000428313 RBM47A0AV96 593 aaKnown RBP17.22■□□□□ 0.35
C9orf3-206ENST00000428313 CCDC22O60826 627 aa17.22■□□□□ 0.35
C9orf3-206ENST00000428313 YY1P25490 414 aa17.22■□□□□ 0.35
C9orf3-206ENST00000428313 IGHMBP2P38935 993 aaKnown RBP17.22■□□□□ 0.35
C9orf3-206ENST00000428313 TMEM62Q0P6H9 643 aa17.22■□□□□ 0.35
C9orf3-206ENST00000428313 PRPF4BQ13523 1007 aaKnown RBP17.22■□□□□ 0.35
C9orf3-206ENST00000428313 DSTYKQ6XUX3 929 aa17.22■□□□□ 0.35
C9orf3-206ENST00000428313 SEPT14Q6ZU15 432 aa17.22■□□□□ 0.35
C9orf3-206ENST00000428313 CDC42EP4Q9H3Q1 356 aaKnown RBP17.22■□□□□ 0.35
C9orf3-206ENST00000428313 ANGPTL2Q9UKU9 493 aa17.22■□□□□ 0.35
C9orf3-206ENST00000428313 RTCBQ9Y3I0 505 aaKnown RBP17.22■□□□□ 0.35
C9orf3-206ENST00000428313 SYNGAP1Q96PV0 1343 aa17.22■□□□□ 0.35
C9orf3-206ENST00000428313 MYMKA6NI61 221 aa17.22■□□□□ 0.35
C9orf3-206ENST00000428313 GFPT2O94808 682 aa17.22■□□□□ 0.35
C9orf3-206ENST00000428313 VIL1P09327 827 aaKnown RBP17.22■□□□□ 0.35
C9orf3-206ENST00000428313 ZCCHC18P0CG32 403 aa17.22■□□□□ 0.35
C9orf3-206ENST00000428313 PIM1P11309 404 aaPredicted RBP17.22■□□□□ 0.35
C9orf3-206ENST00000428313 KRT13P13646 458 aa17.22■□□□□ 0.35
C9orf3-206ENST00000428313 CCNFP41002 786 aa17.22■□□□□ 0.35
C9orf3-206ENST00000428313 EPS15P42566 896 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms