RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 ACKR2O00590 384 aa16.65■□□□□ 0.26
VARS2-203ENST00000428017 PSMD2Q13200 908 aa16.65■□□□□ 0.26
VARS2-203ENST00000428017 CAMK4Q16566 473 aa16.65■□□□□ 0.26
VARS2-203ENST00000428017 FAM187BQ17R55 369 aa16.65■□□□□ 0.26
VARS2-203ENST00000428017 KMT5BQ4FZB7 885 aa16.65■□□□□ 0.26
VARS2-203ENST00000428017 NOTUMQ6P988 496 aa16.65■□□□□ 0.26
VARS2-203ENST00000428017 ZNF720Q7Z2F6 126 aa16.65■□□□□ 0.26
VARS2-203ENST00000428017 APBB1IPQ7Z5R6 666 aaPredicted RBP16.65■□□□□ 0.26
VARS2-203ENST00000428017 HVCN1Q96D96 273 aa16.65■□□□□ 0.26
VARS2-203ENST00000428017 ADAM2Q99965 735 aa16.65■□□□□ 0.26
VARS2-203ENST00000428017 NUP62CLQ9H1M0 184 aa16.65■□□□□ 0.26
VARS2-203ENST00000428017 TMX1Q9H3N1 280 aa16.65■□□□□ 0.26
VARS2-203ENST00000428017 CLSTN2Q9H4D0 955 aa16.65■□□□□ 0.26
VARS2-203ENST00000428017 ST6GALNAC4Q9H4F1 302 aa16.65■□□□□ 0.26
VARS2-203ENST00000428017 RNF216Q9NWF9 866 aaPredicted RBP16.65■□□□□ 0.26
VARS2-203ENST00000428017 EXOC7Q9UPT5 735 aa16.65■□□□□ 0.26
VARS2-203ENST00000428017 TANC1Q9C0D5 1861 aa16.65■□□□□ 0.26
VARS2-203ENST00000428017 EVPLQ92817 2033 aa16.64■□□□□ 0.25
VARS2-203ENST00000428017 N4BP3O15049 544 aa16.64■□□□□ 0.25
VARS2-203ENST00000428017 B4GALT5O43286 388 aa16.64■□□□□ 0.25
VARS2-203ENST00000428017 AMHP03971 560 aa16.64■□□□□ 0.25
VARS2-203ENST00000428017 IBSPP21815 317 aaPredicted RBP16.64■□□□□ 0.25
VARS2-203ENST00000428017 GTF2BQ00403 316 aa16.64■□□□□ 0.25
VARS2-203ENST00000428017 ZC2HC1CQ53FD0 456 aaPredicted RBP16.64■□□□□ 0.25
VARS2-203ENST00000428017 SYCP3Q8IZU3 236 aa16.64■□□□□ 0.25
VARS2-203ENST00000428017 GPT2Q8TD30 523 aa16.64■□□□□ 0.25
VARS2-203ENST00000428017 HERVK_113Q902F9 699 aa16.64■□□□□ 0.25
VARS2-203ENST00000428017 HPS3Q969F9 1004 aa16.64■□□□□ 0.25
VARS2-203ENST00000428017 CCDC51Q96ER9 411 aa16.64■□□□□ 0.25
VARS2-203ENST00000428017 CPB2Q96IY4 423 aa16.64■□□□□ 0.25
VARS2-203ENST00000428017 RNPC3Q96LT9 517 aaKnown RBP16.64■□□□□ 0.25
VARS2-203ENST00000428017 GSDMAQ96QA5 445 aa16.64■□□□□ 0.25
VARS2-203ENST00000428017 ACCSQ96QU6 501 aa16.64■□□□□ 0.25
VARS2-203ENST00000428017 ADPGKQ9BRR6 497 aa16.64■□□□□ 0.25
VARS2-203ENST00000428017 C1orf112Q9NSG2 853 aa16.64■□□□□ 0.25
VARS2-203ENST00000428017 TBX20Q9UMR3 447 aa16.64■□□□□ 0.25
VARS2-203ENST00000428017 MKI67P46013 3256 aaKnown RBP16.64■□□□□ 0.25
VARS2-203ENST00000428017 CNTNAP2Q9UHC6 1331 aa16.64■□□□□ 0.25
VARS2-203ENST00000428017 HNRNPDLO14979 420 aaKnown RBP16.63■□□□□ 0.25
VARS2-203ENST00000428017 KLRC4O43908 158 aa16.63■□□□□ 0.25
VARS2-203ENST00000428017 MYBP10242 640 aa16.63■□□□□ 0.25
VARS2-203ENST00000428017 ARF4P18085 180 aaPredicted RBP16.63■□□□□ 0.25
VARS2-203ENST00000428017 BMP8BP34820 402 aa16.63■□□□□ 0.25
VARS2-203ENST00000428017 LIG4P49917 911 aa16.63■□□□□ 0.25
VARS2-203ENST00000428017 KCNB1Q14721 858 aa16.63■□□□□ 0.25
VARS2-203ENST00000428017 AMHR2Q16671 573 aa16.63■□□□□ 0.25
VARS2-203ENST00000428017 ATF7IP2Q5U623 682 aa16.63■□□□□ 0.25
VARS2-203ENST00000428017 CHRDL2Q6WN34 429 aa16.63■□□□□ 0.25
VARS2-203ENST00000428017 SLC24A5Q71RS6 500 aa16.63■□□□□ 0.25
VARS2-203ENST00000428017 VWCEQ96DN2 955 aa16.63■□□□□ 0.25
VARS2-203ENST00000428017 FIZ1Q96SL8 496 aa16.63■□□□□ 0.25
VARS2-203ENST00000428017 TCHPQ9BT92 498 aa16.63■□□□□ 0.25
VARS2-203ENST00000428017 GTPBP4Q9BZE4 634 aaKnown RBP16.63■□□□□ 0.25
VARS2-203ENST00000428017 TRIM6Q9C030 488 aaPredicted RBP16.63■□□□□ 0.25
VARS2-203ENST00000428017 TSPYL2Q9H2G4 693 aaPredicted RBP16.63■□□□□ 0.25
VARS2-203ENST00000428017 SLC39A2Q9NP94 309 aa16.63■□□□□ 0.25
VARS2-203ENST00000428017 PCDHA5Q9Y5H7 936 aa16.63■□□□□ 0.25
VARS2-203ENST00000428017 SLC4A7Q9Y6M7 1214 aa16.63■□□□□ 0.25
VARS2-203ENST00000428017 DNAH12Q6ZR08 3092 aa16.63■□□□□ 0.25
VARS2-203ENST00000428017 LTBP2Q14767 1821 aa16.62■□□□□ 0.25
VARS2-203ENST00000428017 ENPP3O14638 875 aa16.62■□□□□ 0.25
VARS2-203ENST00000428017 RHOBTB3O94955 611 aa16.62■□□□□ 0.25
VARS2-203ENST00000428017 KIF20AO95235 890 aa16.62■□□□□ 0.25
VARS2-203ENST00000428017 SKIP12755 728 aa16.62■□□□□ 0.25
VARS2-203ENST00000428017 HOXA11P31270 313 aaPredicted RBP16.62■□□□□ 0.25
VARS2-203ENST00000428017 MATR3P43243 847 aaKnown RBP eCLIP16.62■□□□□ 0.25
VARS2-203ENST00000428017 RAB27AP51159 221 aa16.62■□□□□ 0.25
VARS2-203ENST00000428017 WDR5P61964 334 aaKnown RBP16.62■□□□□ 0.25
VARS2-203ENST00000428017 EHHADHQ08426 723 aa16.62■□□□□ 0.25
VARS2-203ENST00000428017 SHHQ15465 462 aa16.62■□□□□ 0.25
VARS2-203ENST00000428017 TCTN1Q2MV58 587 aa16.62■□□□□ 0.25
VARS2-203ENST00000428017 L1TD1Q5T7N2 865 aaKnown RBP16.62■□□□□ 0.25
VARS2-203ENST00000428017 SLC27A1Q6PCB7 646 aa16.62■□□□□ 0.25
VARS2-203ENST00000428017 ZPBP2Q6X784 338 aa16.62■□□□□ 0.25
VARS2-203ENST00000428017 TAS1R3Q7RTX0 852 aa16.62■□□□□ 0.25
VARS2-203ENST00000428017 MAP4K3Q8IVH8 894 aa16.62■□□□□ 0.25
VARS2-203ENST00000428017 ERCC4Q92889 916 aaPredicted RBP16.62■□□□□ 0.25
VARS2-203ENST00000428017 KCNN1Q92952 543 aa16.62■□□□□ 0.25
VARS2-203ENST00000428017 TARS2Q9BW92 718 aaKnown RBP16.62■□□□□ 0.25
VARS2-203ENST00000428017 TMEM206Q9H813 350 aa16.62■□□□□ 0.25
VARS2-203ENST00000428017 RGS18Q9NS28 235 aa16.62■□□□□ 0.25
VARS2-203ENST00000428017 LRFN2Q9ULH4 789 aa16.62■□□□□ 0.25
VARS2-203ENST00000428017 A0A1B0GUA9 196 aa16.61■□□□□ 0.25
VARS2-203ENST00000428017 EIF3DO15371 548 aaKnown RBP eCLIP16.61■□□□□ 0.255e-7■□□□□ 10.2
VARS2-203ENST00000428017 MGEA5O60502 916 aa16.61■□□□□ 0.25
VARS2-203ENST00000428017 PRPF6O94906 941 aaKnown RBP16.61■□□□□ 0.25
VARS2-203ENST00000428017 CASP5P51878 434 aa16.61■□□□□ 0.25
VARS2-203ENST00000428017 STK4Q13043 487 aa16.61■□□□□ 0.25
VARS2-203ENST00000428017 DSC3Q14574 896 aa16.61■□□□□ 0.25
VARS2-203ENST00000428017 C9orf50Q5SZB4 431 aa16.61■□□□□ 0.25
VARS2-203ENST00000428017 NT5DC1Q5TFE4 455 aa16.61■□□□□ 0.25
VARS2-203ENST00000428017 PRPF38BQ5VTL8 546 aaKnown RBP16.61■□□□□ 0.25
VARS2-203ENST00000428017 HACE1Q8IYU2 909 aa16.61■□□□□ 0.25
VARS2-203ENST00000428017 MYOCDQ8IZQ8 938 aa16.61■□□□□ 0.25
VARS2-203ENST00000428017 SYAP1Q96A49 352 aaPredicted RBP16.61■□□□□ 0.25
VARS2-203ENST00000428017 ACO2Q99798 780 aaKnown RBP16.61■□□□□ 0.25
VARS2-203ENST00000428017 ANKFY1Q9P2R3 1169 aa16.61■□□□□ 0.25
VARS2-203ENST00000428017 TNFSF13BQ9Y275 285 aa16.61■□□□□ 0.25
VARS2-203ENST00000428017 USP20Q9Y2K6 914 aa16.61■□□□□ 0.25
VARS2-203ENST00000428017 UBE4BO95155 1302 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms