RNA–Protein interactions for RNA: ENST00000427947.7

USP40-204, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-204ENST00000427947 ZNF536O15090 1300 aa5.49□□□□□ -1.53
USP40-204ENST00000427947 AKAP10O43572 662 aa5.49□□□□□ -1.53
USP40-204ENST00000427947 INHBBP09529 407 aa5.49□□□□□ -1.53
USP40-204ENST00000427947 CT47B1P0C2W7 299 aaPredicted RBP5.49□□□□□ -1.53
USP40-204ENST00000427947 ADCY7P51828 1080 aa5.49□□□□□ -1.53
USP40-204ENST00000427947 ABHD15Q6UXT9 468 aa5.49□□□□□ -1.53
USP40-204ENST00000427947 SPOCD1Q6ZMY3 1216 aa5.49□□□□□ -1.53
USP40-204ENST00000427947 KRTAP19-1Q8IUB9 90 aa5.49□□□□□ -1.53
USP40-204ENST00000427947 MSL3Q8N5Y2 521 aaKnown RBP5.49□□□□□ -1.53
USP40-204ENST00000427947 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.49□□□□□ -1.53
USP40-204ENST00000427947 RIN2Q8WYP3 895 aaPredicted RBP5.49□□□□□ -1.53
USP40-204ENST00000427947 CFHR4Q92496 578 aa5.49□□□□□ -1.53
USP40-204ENST00000427947 LMF1Q96S06 567 aa5.49□□□□□ -1.53
USP40-204ENST00000427947 PTPN18Q99952 460 aa5.49□□□□□ -1.53
USP40-204ENST00000427947 DPYSL5Q9BPU6 564 aa5.49□□□□□ -1.53
USP40-204ENST00000427947 ADI1Q9BV57 179 aa5.49□□□□□ -1.53
USP40-204ENST00000427947 SLC6A15Q9H2J7 730 aa5.49□□□□□ -1.53
USP40-204ENST00000427947 GREM2Q9H772 168 aa5.49□□□□□ -1.53
USP40-204ENST00000427947 METTL14Q9HCE5 456 aaKnown RBP5.49□□□□□ -1.53
USP40-204ENST00000427947 TLR9Q9NR96 1032 aa5.49□□□□□ -1.53
USP40-204ENST00000427947 ING3Q9NXR8 418 aa5.49□□□□□ -1.53
USP40-204ENST00000427947 ZIM2Q9NZV7 527 aa5.49□□□□□ -1.53
USP40-204ENST00000427947 SCOCQ9UIL1 159 aa5.49□□□□□ -1.53
USP40-204ENST00000427947 TUBD1Q9UJT1 453 aa5.49□□□□□ -1.53
USP40-204ENST00000427947 E2F8A0AVK6 867 aa5.48□□□□□ -1.53
USP40-204ENST00000427947 MATN2O00339 956 aa5.48□□□□□ -1.53
USP40-204ENST00000427947 SLC26A4O43511 780 aa5.48□□□□□ -1.53
USP40-204ENST00000427947 AKR1B10O60218 316 aa5.48□□□□□ -1.53
USP40-204ENST00000427947 CDC14BO60729 498 aa5.48□□□□□ -1.53
USP40-204ENST00000427947 HMGB1P09429 215 aaKnown RBP5.48□□□□□ -1.53
USP40-204ENST00000427947 VSIG10L2P0DP72 767 aa5.48□□□□□ -1.53
USP40-204ENST00000427947 CR2P20023 1033 aa5.48□□□□□ -1.53
USP40-204ENST00000427947 CTSSP25774 331 aa5.48□□□□□ -1.53
USP40-204ENST00000427947 EPHB4P54760 987 aa5.48□□□□□ -1.53
USP40-204ENST00000427947 KIF23Q02241 960 aaPredicted RBP5.48□□□□□ -1.53
USP40-204ENST00000427947 UBE3CQ15386 1083 aa5.48□□□□□ -1.53
USP40-204ENST00000427947 TMEM240Q5SV17 173 aa5.48□□□□□ -1.53
USP40-204ENST00000427947 TAS1R1Q7RTX1 841 aa5.48□□□□□ -1.53
USP40-204ENST00000427947 CMTR2Q8IYT2 770 aaKnown RBP5.48□□□□□ -1.53
USP40-204ENST00000427947 CPA6Q8N4T0 437 aa5.48□□□□□ -1.53
USP40-204ENST00000427947 SNX33Q8WV41 574 aa5.48□□□□□ -1.53
USP40-204ENST00000427947 MEGF9Q9H1U4 602 aa5.48□□□□□ -1.53
USP40-204ENST00000427947 SEC61A2Q9H9S3 476 aa5.48□□□□□ -1.53
USP40-204ENST00000427947 RBM12Q9NTZ6 932 aaKnown RBP5.48□□□□□ -1.53
USP40-204ENST00000427947 NCDNQ9UBB6 729 aa5.48□□□□□ -1.53
USP40-204ENST00000427947 TCEAL9Q9UHQ7 104 aa5.48□□□□□ -1.53
USP40-204ENST00000427947 ZNF180Q9UJW8 692 aa5.48□□□□□ -1.53
USP40-204ENST00000427947 OAZ3Q9UMX2 235 aa5.48□□□□□ -1.53
USP40-204ENST00000427947 EID1Q9Y6B2 187 aa5.48□□□□□ -1.53
USP40-204ENST00000427947 RPTORQ8N122 1335 aa5.48□□□□□ -1.53
USP40-204ENST00000427947 PRICKLE3O43900 615 aaPredicted RBP5.47□□□□□ -1.53
USP40-204ENST00000427947 ABLIM3O94929 683 aa5.47□□□□□ -1.53
USP40-204ENST00000427947 ZRANB2O95218 330 aaKnown RBP eCLIP5.47□□□□□ -1.53
USP40-204ENST00000427947 IL33O95760 270 aa5.47□□□□□ -1.53
USP40-204ENST00000427947 JUNP05412 331 aaKnown RBP5.47□□□□□ -1.53
USP40-204ENST00000427947 GSPT1P15170 499 aaKnown RBP5.47□□□□□ -1.53
USP40-204ENST00000427947 ADSLP30566 484 aaPredicted RBP5.47□□□□□ -1.53
USP40-204ENST00000427947 MCAMP43121 646 aa5.47□□□□□ -1.53
USP40-204ENST00000427947 SLC16A1P53985 500 aa5.47□□□□□ -1.53
USP40-204ENST00000427947 RIN1Q13671 783 aa5.47□□□□□ -1.53
USP40-204ENST00000427947 SAFB2Q14151 953 aaKnown RBP eCLIP5.47□□□□□ -1.53
USP40-204ENST00000427947 NOMO1Q15155 1222 aa5.47□□□□□ -1.53
USP40-204ENST00000427947 UAP1L1Q3KQV9 507 aa5.47□□□□□ -1.53
USP40-204ENST00000427947 GAGE13Q4V321 117 aa5.47□□□□□ -1.53
USP40-204ENST00000427947 SLFN13Q68D06 897 aa5.47□□□□□ -1.53
USP40-204ENST00000427947 FAM180AQ6UWF9 173 aa5.47□□□□□ -1.53
USP40-204ENST00000427947 THEMISQ8N1K5 641 aaPredicted RBP5.47□□□□□ -1.53
USP40-204ENST00000427947 SHCBP1Q8NEM2 672 aa5.47□□□□□ -1.53
USP40-204ENST00000427947 KRTAP4-12Q9BQ66 201 aa5.47□□□□□ -1.53
USP40-204ENST00000427947 RTFDC1Q9BY42 306 aaPredicted RBP5.47□□□□□ -1.53
USP40-204ENST00000427947 CDH19Q9H159 772 aa5.47□□□□□ -1.53
USP40-204ENST00000427947 SAP30BPQ9UHR5 308 aaKnown RBP5.47□□□□□ -1.53
USP40-204ENST00000427947 RCAN3Q9UKA8 241 aa5.47□□□□□ -1.53
USP40-204ENST00000427947 A0A1W2PRX2 142 aa5.46□□□□□ -1.54
USP40-204ENST00000427947 MTSS1O43312 755 aa5.46□□□□□ -1.54
USP40-204ENST00000427947 PLATP00750 562 aa5.46□□□□□ -1.54
USP40-204ENST00000427947 PF4V1P10720 104 aa5.46□□□□□ -1.54
USP40-204ENST00000427947 ZSCAN20P17040 1043 aaPredicted RBP5.46□□□□□ -1.54
USP40-204ENST00000427947 ECHS1P30084 290 aa5.46□□□□□ -1.54
USP40-204ENST00000427947 WNT3AP56704 352 aa5.46□□□□□ -1.54
USP40-204ENST00000427947 ADAM8P78325 824 aa5.46□□□□□ -1.54
USP40-204ENST00000427947 PPP3CAQ08209 521 aa5.46□□□□□ -1.54
USP40-204ENST00000427947 PPP2R5AQ15172 486 aa5.46□□□□□ -1.54
USP40-204ENST00000427947 MST1LQ2TV78 715 aa5.46□□□□□ -1.54
USP40-204ENST00000427947 TBC1D10BQ4KMP7 808 aaPredicted RBP5.46□□□□□ -1.54
USP40-204ENST00000427947 ZFYVE27Q5T4F4 411 aa5.46□□□□□ -1.54
USP40-204ENST00000427947 TAX1BP1Q86VP1 789 aa5.46□□□□□ -1.54
USP40-204ENST00000427947 MIER2Q8N344 545 aa5.46□□□□□ -1.54
USP40-204ENST00000427947 GIMAP8Q8ND71 665 aaPredicted RBP5.46□□□□□ -1.54
USP40-204ENST00000427947 GPR156Q8NFN8 814 aa5.46□□□□□ -1.54
USP40-204ENST00000427947 ZNF480Q8WV37 535 aa5.46□□□□□ -1.54
USP40-204ENST00000427947 NRG4Q8WWG1 115 aa5.46□□□□□ -1.54
USP40-204ENST00000427947 RABGGTAQ92696 567 aa5.46□□□□□ -1.54
USP40-204ENST00000427947 HSPBAP1Q96EW2 488 aa5.46□□□□□ -1.54
USP40-204ENST00000427947 TEPSINQ96N21 525 aa5.46□□□□□ -1.54
USP40-204ENST00000427947 GNRHR2Q96P88 292 aa5.46□□□□□ -1.54
USP40-204ENST00000427947 GPHA2Q96T91 129 aa5.46□□□□□ -1.54
USP40-204ENST00000427947 RHOBTB2Q9BYZ6 727 aa5.46□□□□□ -1.54
USP40-204ENST00000427947 CSRNP2Q9H175 543 aa5.46□□□□□ -1.54
USP40-204ENST00000427947 TCF7L1Q9HCS4 588 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms