RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 IRS1P35568 1242 aa22.88■■□□□ 1.25
HSPG2-205ENST00000427897 PBX3P40426 434 aa22.88■■□□□ 1.25
HSPG2-205ENST00000427897 BCAR1P56945 870 aa22.88■■□□□ 1.25
HSPG2-205ENST00000427897 PLCB3Q01970 1234 aa22.88■■□□□ 1.25
HSPG2-205ENST00000427897 PPP2R5AQ15172 486 aa22.88■■□□□ 1.25
HSPG2-205ENST00000427897 TMC7Q7Z402 723 aa22.88■■□□□ 1.25
HSPG2-205ENST00000427897 IFNLR1Q8IU57 520 aaPredicted RBP22.88■■□□□ 1.25
HSPG2-205ENST00000427897 DEPTORQ8TB45 409 aa22.88■■□□□ 1.25
HSPG2-205ENST00000427897 CCDC51Q96ER9 411 aa22.88■■□□□ 1.25
HSPG2-205ENST00000427897 C2orf40Q9H1Z8 148 aa22.88■■□□□ 1.25
HSPG2-205ENST00000427897 RSAD1Q9HA92 442 aa22.88■■□□□ 1.25
HSPG2-205ENST00000427897 KANSL3Q9P2N6 904 aa22.88■■□□□ 1.25
HSPG2-205ENST00000427897 LZTS1Q9Y250 596 aa22.88■■□□□ 1.25
HSPG2-205ENST00000427897 CNTNAP2Q9UHC6 1331 aa22.87■■□□□ 1.25
HSPG2-205ENST00000427897 OFD1O75665 1012 aa22.87■■□□□ 1.25
HSPG2-205ENST00000427897 HOXA11P31270 313 aaPredicted RBP22.87■■□□□ 1.25
HSPG2-205ENST00000427897 NRIP1P48552 1158 aa22.87■■□□□ 1.25
HSPG2-205ENST00000427897 NDUFV1P49821 464 aa22.87■■□□□ 1.25
HSPG2-205ENST00000427897 MBTD1Q05BQ5 628 aa22.87■■□□□ 1.25
HSPG2-205ENST00000427897 CUL4AQ13619 759 aa22.87■■□□□ 1.25
HSPG2-205ENST00000427897 CAMK1Q14012 370 aa22.87■■□□□ 1.25
HSPG2-205ENST00000427897 PTCRAQ6ISU1 281 aaPredicted RBP22.87■■□□□ 1.25
HSPG2-205ENST00000427897 TMEM87AQ8NBN3 555 aa22.87■■□□□ 1.25
HSPG2-205ENST00000427897 TMEM169Q96HH4 297 aa22.87■■□□□ 1.25
HSPG2-205ENST00000427897 APOL6Q9BWW8 343 aa22.87■■□□□ 1.25
HSPG2-205ENST00000427897 NFKBIZQ9BYH8 718 aa22.87■■□□□ 1.25
HSPG2-205ENST00000427897 CSRNP2Q9H175 543 aa22.87■■□□□ 1.25
HSPG2-205ENST00000427897 VWA3AA6NCI4 1184 aa22.86■■□□□ 1.25
HSPG2-205ENST00000427897 PP2D1A8MPX8 630 aa22.86■■□□□ 1.25
HSPG2-205ENST00000427897 NT5C1B-RDH14C9J2C7 533 aa22.86■■□□□ 1.25
HSPG2-205ENST00000427897 CDC25AP30304 524 aa22.86■■□□□ 1.25
HSPG2-205ENST00000427897 ATP2C1P98194 919 aaPredicted RBP22.86■■□□□ 1.25
HSPG2-205ENST00000427897 ECM1Q16610 540 aa22.86■■□□□ 1.25
HSPG2-205ENST00000427897 PLPP4Q5VZY2 271 aa22.86■■□□□ 1.25
HSPG2-205ENST00000427897 BRAPQ7Z569 592 aa22.86■■□□□ 1.25
HSPG2-205ENST00000427897 MRPL10Q7Z7H8 261 aaKnown RBP22.86■■□□□ 1.25
HSPG2-205ENST00000427897 KIFAP3Q92845 792 aa22.86■■□□□ 1.25
HSPG2-205ENST00000427897 NECAB3Q96P71 396 aaPredicted RBP22.86■■□□□ 1.25
HSPG2-205ENST00000427897 TCF25Q9BQ70 676 aa22.86■■□□□ 1.25
HSPG2-205ENST00000427897 PRMT7Q9NVM4 692 aaPredicted RBP22.86■■□□□ 1.25
HSPG2-205ENST00000427897 MEIS3P2A8K0S8 358 aa22.85■■□□□ 1.25
HSPG2-205ENST00000427897 ARF4P18085 180 aaPredicted RBP22.85■■□□□ 1.25
HSPG2-205ENST00000427897 NCLP19338 710 aaKnown RBP22.85■■□□□ 1.25
HSPG2-205ENST00000427897 GTF2F1P35269 517 aaKnown RBP eCLIP22.85■■□□□ 1.25
HSPG2-205ENST00000427897 NAMPTP43490 491 aa22.85■■□□□ 1.25
HSPG2-205ENST00000427897 ERVFC1P60507 584 aa22.85■■□□□ 1.25
HSPG2-205ENST00000427897 MAPK6Q16659 721 aa22.85■■□□□ 1.25
HSPG2-205ENST00000427897 UBXN11Q5T124 520 aa22.85■■□□□ 1.25
HSPG2-205ENST00000427897 ARL6IP4Q66PJ3 421 aaKnown RBP22.85■■□□□ 1.25
HSPG2-205ENST00000427897 AGMOQ6ZNB7 445 aa22.85■■□□□ 1.25
HSPG2-205ENST00000427897 ADGRD2Q7Z7M1 963 aa22.85■■□□□ 1.25
HSPG2-205ENST00000427897 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.85■■□□□ 1.25
HSPG2-205ENST00000427897 EIF2AQ9BY44 585 aaKnown RBP22.85■■□□□ 1.25
HSPG2-205ENST00000427897 NGRNQ9NPE2 291 aaKnown RBP22.85■■□□□ 1.25
HSPG2-205ENST00000427897 TBC1D13Q9NVG8 400 aa22.85■■□□□ 1.25
HSPG2-205ENST00000427897 IPPQ9Y573 584 aa22.85■■□□□ 1.25
HSPG2-205ENST00000427897 FSD2A1L4K1 749 aa22.84■■□□□ 1.25
HSPG2-205ENST00000427897 E9PMD0 336 aa22.84■■□□□ 1.25
HSPG2-205ENST00000427897 EYA4O95677 639 aa22.84■■□□□ 1.25
HSPG2-205ENST00000427897 BMP15O95972 392 aa22.84■■□□□ 1.25
HSPG2-205ENST00000427897 ALDH2P05091 517 aa22.84■■□□□ 1.25
HSPG2-205ENST00000427897 SSBP05455 408 aaKnown RBP eCLIP22.84■■□□□ 1.25
HSPG2-205ENST00000427897 CLUL1Q15846 466 aa22.84■■□□□ 1.25
HSPG2-205ENST00000427897 IL17AQ16552 155 aa22.84■■□□□ 1.25
HSPG2-205ENST00000427897 SLC27A1Q6PCB7 646 aa22.84■■□□□ 1.25
HSPG2-205ENST00000427897 SLC39A11Q8N1S5 342 aa22.84■■□□□ 1.25
HSPG2-205ENST00000427897 PRIMPOLQ96LW4 560 aa22.84■■□□□ 1.25
HSPG2-205ENST00000427897 NT5C3AQ9H0P0 336 aa22.84■■□□□ 1.25
HSPG2-205ENST00000427897 NRDE2Q9H7Z3 1164 aa22.84■■□□□ 1.25
HSPG2-205ENST00000427897 POLD4Q9HCU8 107 aa22.84■■□□□ 1.25
HSPG2-205ENST00000427897 FOXD4L1Q9NU39 408 aa22.84■■□□□ 1.25
HSPG2-205ENST00000427897 PCDHGC5Q9Y5F6 944 aa22.84■■□□□ 1.25
HSPG2-205ENST00000427897 PER2O15055 1255 aa22.83■■□□□ 1.25
HSPG2-205ENST00000427897 NPTXRO95502 500 aa22.83■■□□□ 1.25
HSPG2-205ENST00000427897 POMCP01189 267 aa22.83■■□□□ 1.25
HSPG2-205ENST00000427897 SRGAP2BP0DMP2 458 aa22.83■■□□□ 1.25
HSPG2-205ENST00000427897 ADAM15Q13444 863 aa22.83■■□□□ 1.25
HSPG2-205ENST00000427897 PRPF4BQ13523 1007 aaKnown RBP22.83■■□□□ 1.25
HSPG2-205ENST00000427897 EFHBQ8N7U6 833 aa22.83■■□□□ 1.25
HSPG2-205ENST00000427897 RASSF8Q8NHQ8 419 aa22.83■■□□□ 1.25
HSPG2-205ENST00000427897 CCDC169A6NNP5 214 aa22.82■■□□□ 1.24
HSPG2-205ENST00000427897 LINC01565O15544 149 aa22.82■■□□□ 1.24
HSPG2-205ENST00000427897 B4GALT5O43286 388 aa22.82■■□□□ 1.24
HSPG2-205ENST00000427897 NR1I2O75469 434 aa22.82■■□□□ 1.24
HSPG2-205ENST00000427897 PRKCBP05771 671 aa22.82■■□□□ 1.24
HSPG2-205ENST00000427897 SMC1AQ14683 1233 aaKnown RBP22.82■■□□□ 1.24
HSPG2-205ENST00000427897 CTC1Q2NKJ3 1217 aa22.82■■□□□ 1.24
HSPG2-205ENST00000427897 CDR2LQ86X02 465 aaPredicted RBP22.82■■□□□ 1.24
HSPG2-205ENST00000427897 SMG8Q8ND04 991 aaKnown RBP22.82■■□□□ 1.24
HSPG2-205ENST00000427897 CALML4Q96GE6 196 aa22.82■■□□□ 1.24
HSPG2-205ENST00000427897 PLIN2Q99541 437 aa22.82■■□□□ 1.24
HSPG2-205ENST00000427897 CDCA3Q99618 268 aaPredicted RBP22.82■■□□□ 1.24
HSPG2-205ENST00000427897 ADPGKQ9BRR6 497 aa22.82■■□□□ 1.24
HSPG2-205ENST00000427897 PARP2Q9UGN5 583 aa22.82■■□□□ 1.24
HSPG2-205ENST00000427897 FAN1Q9Y2M0 1017 aa22.82■■□□□ 1.24
HSPG2-205ENST00000427897 HES2Q9Y543 173 aa22.82■■□□□ 1.24
HSPG2-205ENST00000427897 ATG2AQ2TAZ0 1938 aa22.82■■□□□ 1.24
HSPG2-205ENST00000427897 GRXCR2A6NFK2 248 aa22.81■■□□□ 1.24
HSPG2-205ENST00000427897 K7ELQ4 463 aaPredicted RBP22.81■■□□□ 1.24
HSPG2-205ENST00000427897 N4BP3O15049 544 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms