RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 PER2O15055 1255 aa11.3□□□□□ -0.6
COMMD1-202ENST00000427417 MBTPS2O43462 519 aa11.3□□□□□ -0.6
COMMD1-202ENST00000427417 USO1O60763 962 aaKnown RBP11.3□□□□□ -0.6
COMMD1-202ENST00000427417 ZC3H11AO75152 810 aaKnown RBP eCLIP11.3□□□□□ -0.6
COMMD1-202ENST00000427417 OFD1O75665 1012 aa11.3□□□□□ -0.6
COMMD1-202ENST00000427417 SPATA31C1P0DKV0 1188 aa11.3□□□□□ -0.6
COMMD1-202ENST00000427417 U2AF2P26368 475 aaKnown RBP eCLIP11.3□□□□□ -0.6
COMMD1-202ENST00000427417 FXR2P51116 673 aaKnown RBP eCLIP11.3□□□□□ -0.6
COMMD1-202ENST00000427417 BCAR1P56945 870 aa11.3□□□□□ -0.6
COMMD1-202ENST00000427417 COASYQ13057 564 aa11.3□□□□□ -0.6
COMMD1-202ENST00000427417 SMC1AQ14683 1233 aaKnown RBP11.3□□□□□ -0.6
COMMD1-202ENST00000427417 DUSP6Q16828 381 aa11.3□□□□□ -0.6
COMMD1-202ENST00000427417 PLPP4Q5VZY2 271 aa11.3□□□□□ -0.6
COMMD1-202ENST00000427417 MRPL10Q7Z7H8 261 aaKnown RBP11.3□□□□□ -0.6
COMMD1-202ENST00000427417 ADHFE1Q8IWW8 467 aa11.3□□□□□ -0.6
COMMD1-202ENST00000427417 HACE1Q8IYU2 909 aa11.3□□□□□ -0.6
COMMD1-202ENST00000427417 LPPQ93052 612 aa11.3□□□□□ -0.6
COMMD1-202ENST00000427417 FAM193BQ96PV7 902 aaPredicted RBP11.3□□□□□ -0.6
COMMD1-202ENST00000427417 RSAD1Q9HA92 442 aa11.3□□□□□ -0.6
COMMD1-202ENST00000427417 C11orf16Q9NQ32 467 aa11.3□□□□□ -0.6
COMMD1-202ENST00000427417 TBC1D13Q9NVG8 400 aa11.3□□□□□ -0.6
COMMD1-202ENST00000427417 BARX2Q9UMQ3 279 aaPredicted RBP11.3□□□□□ -0.6
COMMD1-202ENST00000427417 INPP5FQ9Y2H2 1132 aa11.3□□□□□ -0.6
COMMD1-202ENST00000427417 TSPAN1O60635 241 aa11.29□□□□□ -0.6
COMMD1-202ENST00000427417 MED24O75448 989 aa11.29□□□□□ -0.6
COMMD1-202ENST00000427417 EYA4O95677 639 aa11.29□□□□□ -0.6
COMMD1-202ENST00000427417 GLP2RO95838 553 aa11.29□□□□□ -0.6
COMMD1-202ENST00000427417 ALADP13716 330 aa11.29□□□□□ -0.6
COMMD1-202ENST00000427417 NCLP19338 710 aaKnown RBP11.29□□□□□ -0.6
COMMD1-202ENST00000427417 HOXA11P31270 313 aaPredicted RBP11.29□□□□□ -0.6
COMMD1-202ENST00000427417 ZP2Q05996 745 aa11.29□□□□□ -0.6
COMMD1-202ENST00000427417 CAPSQ13938 189 aa11.29□□□□□ -0.6
COMMD1-202ENST00000427417 GIT2Q14161 759 aa11.29□□□□□ -0.6
COMMD1-202ENST00000427417 PDIA5Q14554 519 aa11.29□□□□□ -0.6
COMMD1-202ENST00000427417 ZBTB8OSQ8IWT0 167 aa11.29□□□□□ -0.6
COMMD1-202ENST00000427417 TMEM87AQ8NBN3 555 aa11.29□□□□□ -0.6
COMMD1-202ENST00000427417 SMRP1Q8NCR6 262 aa11.29□□□□□ -0.6
COMMD1-202ENST00000427417 ASAP3Q8TDY4 903 aa11.29□□□□□ -0.6
COMMD1-202ENST00000427417 MSLNLQ96KJ4 702 aa11.29□□□□□ -0.6
COMMD1-202ENST00000427417 LRFN3Q9BTN0 628 aa11.29□□□□□ -0.6
COMMD1-202ENST00000427417 TRIM6Q9C030 488 aaPredicted RBP11.29□□□□□ -0.6
COMMD1-202ENST00000427417 POLR3FQ9H1D9 316 aaPredicted RBP11.29□□□□□ -0.6
COMMD1-202ENST00000427417 CLEC1BQ9P126 229 aa11.29□□□□□ -0.6
COMMD1-202ENST00000427417 DAXXQ9UER7 740 aaPredicted RBP11.29□□□□□ -0.6
COMMD1-202ENST00000427417 LRWD1Q9UFC0 647 aa11.29□□□□□ -0.6
COMMD1-202ENST00000427417 ARID2Q68CP9 1835 aa11.29□□□□□ -0.6
COMMD1-202ENST00000427417 ARHGEF35A5YM69 484 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 LRRIQ4A6NIV6 560 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 MEIS3P2A8K0S8 358 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 NT5C1B-RDH14C9J2C7 533 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 PI4K2BG5E9Z4 385 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 H3BQV1 296 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 ALDH2P05091 517 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 GALTP07902 379 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 ITGA4P13612 1032 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 GLRA2P23416 452 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 MBTD1Q05BQ5 628 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 UBXN11Q5T124 520 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 POTEGQ6S5H5 508 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 TMEM184AQ6ZMB5 413 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 AGMOQ6ZNB7 445 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 MAEAQ7L5Y9 396 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 MRPL43Q8N983 215 aaKnown RBP11.28□□□□□ -0.6
COMMD1-202ENST00000427417 VN1R2Q8NFZ6 395 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 IGSF21Q96ID5 467 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 TMX3Q96JJ7 454 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 PRIMPOLQ96LW4 560 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 TMEM175Q9BSA9 504 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 GBP3Q9H0R5 595 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 CSRNP2Q9H175 543 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 C2orf40Q9H1Z8 148 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 NRDE2Q9H7Z3 1164 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 PRMT7Q9NVM4 692 aaPredicted RBP11.28□□□□□ -0.6
COMMD1-202ENST00000427417 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.28□□□□□ -0.6
COMMD1-202ENST00000427417 C5orf42Q9H799 3197 aa11.28□□□□□ -0.6
COMMD1-202ENST00000427417 A0A087WWV3 80 aa11.27□□□□□ -0.61
COMMD1-202ENST00000427417 C19orf67A6NJJ6 358 aa11.27□□□□□ -0.61
COMMD1-202ENST00000427417 HIDE1A8MVS5 230 aa11.27□□□□□ -0.61
COMMD1-202ENST00000427417 NR1I2O75469 434 aa11.27□□□□□ -0.61
COMMD1-202ENST00000427417 HOXB8P17481 243 aaPredicted RBP11.27□□□□□ -0.61
COMMD1-202ENST00000427417 CYP11B2P19099 503 aa11.27□□□□□ -0.61
COMMD1-202ENST00000427417 CA8P35219 290 aa11.27□□□□□ -0.61
COMMD1-202ENST00000427417 CCT6AP40227 531 aaKnown RBP11.27□□□□□ -0.61
COMMD1-202ENST00000427417 PRPHP41219 470 aa11.27□□□□□ -0.61
COMMD1-202ENST00000427417 PTGDRQ13258 359 aa11.27□□□□□ -0.61
COMMD1-202ENST00000427417 PPP2R5AQ15172 486 aa11.27□□□□□ -0.61
COMMD1-202ENST00000427417 RILPL1Q5EBL4 403 aa11.27□□□□□ -0.61
COMMD1-202ENST00000427417 TMEM31Q5JXX7 168 aa11.27□□□□□ -0.61
COMMD1-202ENST00000427417 KRT79Q5XKE5 535 aa11.27□□□□□ -0.61
COMMD1-202ENST00000427417 MCTP1Q6DN14 999 aa11.27□□□□□ -0.61
COMMD1-202ENST00000427417 SLC27A1Q6PCB7 646 aa11.27□□□□□ -0.61
COMMD1-202ENST00000427417 PADI6Q6TGC4 694 aa11.27□□□□□ -0.61
COMMD1-202ENST00000427417 DTHD1Q6ZMT9 781 aa11.27□□□□□ -0.61
COMMD1-202ENST00000427417 DDX53Q86TM3 631 aaKnown RBP11.27□□□□□ -0.61
COMMD1-202ENST00000427417 VPS52Q8N1B4 723 aa11.27□□□□□ -0.61
COMMD1-202ENST00000427417 C4orf32Q8N8J7 132 aa11.27□□□□□ -0.61
COMMD1-202ENST00000427417 CASP10Q92851 521 aa11.27□□□□□ -0.61
COMMD1-202ENST00000427417 CPB2Q96IY4 423 aa11.27□□□□□ -0.61
COMMD1-202ENST00000427417 GIT1Q9Y2X7 761 aa11.27□□□□□ -0.61
COMMD1-202ENST00000427417 IPPQ9Y573 584 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms