RNA–Protein interactions for RNA: ENST00000426343.5

HDLBP-212, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-212ENST00000426343 NRDE2Q9H7Z3 1164 aa19.75■□□□□ 0.75
HDLBP-212ENST00000426343 KANSL3Q9P2N6 904 aa19.75■□□□□ 0.75
HDLBP-212ENST00000426343 DBR1Q9UK59 544 aaKnown RBP19.75■□□□□ 0.75
HDLBP-212ENST00000426343 BARX2Q9UMQ3 279 aaPredicted RBP19.75■□□□□ 0.75
HDLBP-212ENST00000426343 NOL7Q9UMY1 257 aaKnown RBP19.75■□□□□ 0.75
HDLBP-212ENST00000426343 CNTNAP2Q9UHC6 1331 aa19.75■□□□□ 0.75
HDLBP-212ENST00000426343 A0A087WWV3 80 aa19.74■□□□□ 0.75
HDLBP-212ENST00000426343 HIDE1A8MVS5 230 aa19.74■□□□□ 0.75
HDLBP-212ENST00000426343 GPR37L1O60883 481 aa19.74■□□□□ 0.75
HDLBP-212ENST00000426343 MED24O75448 989 aa19.74■□□□□ 0.75
HDLBP-212ENST00000426343 GALTP07902 379 aa19.74■□□□□ 0.75
HDLBP-212ENST00000426343 SRGAP2BP0DMP2 458 aa19.74■□□□□ 0.75
HDLBP-212ENST00000426343 ALADP13716 330 aa19.74■□□□□ 0.75
HDLBP-212ENST00000426343 NCLP19338 710 aaKnown RBP19.74■□□□□ 0.75
HDLBP-212ENST00000426343 GLRA2P23416 452 aa19.74■□□□□ 0.75
HDLBP-212ENST00000426343 U2AF2P26368 475 aaKnown RBP eCLIP19.74■□□□□ 0.752e-9■■■□□ 15.4
HDLBP-212ENST00000426343 RPA1P27694 616 aa19.74■□□□□ 0.75
HDLBP-212ENST00000426343 CAPSQ13938 189 aa19.74■□□□□ 0.75
HDLBP-212ENST00000426343 KCNC3Q14003 757 aa19.74■□□□□ 0.75
HDLBP-212ENST00000426343 SMC1AQ14683 1233 aaKnown RBP19.74■□□□□ 0.75
HDLBP-212ENST00000426343 TMEM31Q5JXX7 168 aa19.74■□□□□ 0.75
HDLBP-212ENST00000426343 NOTUMQ6P988 496 aa19.74■□□□□ 0.75
HDLBP-212ENST00000426343 VN1R2Q8NFZ6 395 aa19.74■□□□□ 0.75
HDLBP-212ENST00000426343 RSAD1Q9HA92 442 aa19.74■□□□□ 0.75
HDLBP-212ENST00000426343 UBN1Q9NPG3 1134 aa19.74■□□□□ 0.75
HDLBP-212ENST00000426343 INPP5FQ9Y2H2 1132 aa19.74■□□□□ 0.75
HDLBP-212ENST00000426343 KIAA1671Q9BY89 1806 aa19.74■□□□□ 0.75
HDLBP-212ENST00000426343 NT5C1B-RDH14C9J2C7 533 aa19.73■□□□□ 0.75
HDLBP-212ENST00000426343 INO80B-WBP1J3KQ70 363 aa19.73■□□□□ 0.75
HDLBP-212ENST00000426343 ST18O60284 1047 aa19.73■□□□□ 0.75
HDLBP-212ENST00000426343 TSPAN1O60635 241 aa19.73■□□□□ 0.75
HDLBP-212ENST00000426343 ZC3H11AO75152 810 aaKnown RBP eCLIP19.73■□□□□ 0.75
HDLBP-212ENST00000426343 MUTP22033 750 aa19.73■□□□□ 0.75
HDLBP-212ENST00000426343 RNASELQ05823 741 aaKnown RBP19.73■□□□□ 0.75
HDLBP-212ENST00000426343 MBTD1Q05BQ5 628 aa19.73■□□□□ 0.75
HDLBP-212ENST00000426343 C4orf32Q8N8J7 132 aa19.73■□□□□ 0.75
HDLBP-212ENST00000426343 MCPH1Q8NEM0 835 aa19.73■□□□□ 0.75
HDLBP-212ENST00000426343 IGSF21Q96ID5 467 aa19.73■□□□□ 0.75
HDLBP-212ENST00000426343 LRFN3Q9BTN0 628 aa19.73■□□□□ 0.75
HDLBP-212ENST00000426343 POLR3FQ9H1D9 316 aaPredicted RBP19.73■□□□□ 0.75
HDLBP-212ENST00000426343 C2orf71A6NGG8 1288 aa19.72■□□□□ 0.75
HDLBP-212ENST00000426343 USO1O60763 962 aaKnown RBP19.72■□□□□ 0.75
HDLBP-212ENST00000426343 FXR2P51116 673 aaKnown RBP eCLIP19.72■□□□□ 0.752e-7■■□□□ 11.5
HDLBP-212ENST00000426343 AMHR2Q16671 573 aa19.72■□□□□ 0.75
HDLBP-212ENST00000426343 DDX53Q86TM3 631 aaKnown RBP19.72■□□□□ 0.75
HDLBP-212ENST00000426343 SMG8Q8ND04 991 aaKnown RBP19.72■□□□□ 0.75
HDLBP-212ENST00000426343 CSRNP2Q9H175 543 aa19.72■□□□□ 0.75
HDLBP-212ENST00000426343 STK39Q9UEW8 545 aa19.72■□□□□ 0.75
HDLBP-212ENST00000426343 KIF3AQ9Y496 699 aa19.72■□□□□ 0.75
HDLBP-212ENST00000426343 CXCL14O95715 111 aa19.71■□□□□ 0.75
HDLBP-212ENST00000426343 ALDH2P05091 517 aa19.71■□□□□ 0.75
HDLBP-212ENST00000426343 ITGA4P13612 1032 aa19.71■□□□□ 0.75
HDLBP-212ENST00000426343 HOXB8P17481 243 aaPredicted RBP19.71■□□□□ 0.75
HDLBP-212ENST00000426343 RBM10P98175 930 aaKnown RBP19.71■□□□□ 0.75
HDLBP-212ENST00000426343 GIT2Q14161 759 aa19.71■□□□□ 0.75
HDLBP-212ENST00000426343 HAUS3Q68CZ6 603 aa19.71■□□□□ 0.75
HDLBP-212ENST00000426343 ANKRD54Q6NXT1 300 aa19.71■□□□□ 0.75
HDLBP-212ENST00000426343 TMEM173Q86WV6 379 aaPredicted RBP19.71■□□□□ 0.75
HDLBP-212ENST00000426343 ZNF280BQ86YH2 543 aa19.71■□□□□ 0.75
HDLBP-212ENST00000426343 VPS52Q8N1B4 723 aa19.71■□□□□ 0.75
HDLBP-212ENST00000426343 TMEM175Q9BSA9 504 aa19.71■□□□□ 0.75
HDLBP-212ENST00000426343 UPF2Q9HAU5 1272 aaKnown RBP19.71■□□□□ 0.75
HDLBP-212ENST00000426343 USP15Q9Y4E8 981 aaPredicted RBP19.71■□□□□ 0.75
HDLBP-212ENST00000426343 IPPQ9Y573 584 aa19.71■□□□□ 0.75
HDLBP-212ENST00000426343 INPPL1O15357 1258 aa19.7■□□□□ 0.74
HDLBP-212ENST00000426343 DCXO43602 365 aa19.7■□□□□ 0.74
HDLBP-212ENST00000426343 CTSAP10619 480 aa19.7■□□□□ 0.74
HDLBP-212ENST00000426343 SLC11A1P49279 550 aa19.7■□□□□ 0.74
HDLBP-212ENST00000426343 TOB1P50616 345 aaPredicted RBP19.7■□□□□ 0.74
HDLBP-212ENST00000426343 PDIA5Q14554 519 aa19.7■□□□□ 0.74
HDLBP-212ENST00000426343 POTEGQ6S5H5 508 aa19.7■□□□□ 0.74
HDLBP-212ENST00000426343 SUSD6Q92537 303 aa19.7■□□□□ 0.74
HDLBP-212ENST00000426343 CPB2Q96IY4 423 aa19.7■□□□□ 0.74
HDLBP-212ENST00000426343 FAM193BQ96PV7 902 aaPredicted RBP19.7■□□□□ 0.74
HDLBP-212ENST00000426343 EIF2AQ9BY44 585 aaKnown RBP19.7■□□□□ 0.74
HDLBP-212ENST00000426343 GBP3Q9H0R5 595 aa19.7■□□□□ 0.74
HDLBP-212ENST00000426343 ZBP1Q9H171 429 aa19.7■□□□□ 0.74
HDLBP-212ENST00000426343 S1PR5Q9H228 398 aa19.7■□□□□ 0.74
HDLBP-212ENST00000426343 C11orf16Q9NQ32 467 aa19.7■□□□□ 0.74
HDLBP-212ENST00000426343 GPRC5CQ9NQ84 441 aa19.7■□□□□ 0.74
HDLBP-212ENST00000426343 DNAJB4Q9UDY4 337 aa19.7■□□□□ 0.74
HDLBP-212ENST00000426343 IRAK3Q9Y616 596 aa19.7■□□□□ 0.74
HDLBP-212ENST00000426343 STK24Q9Y6E0 443 aa19.7■□□□□ 0.74
HDLBP-212ENST00000426343 ATG2AQ2TAZ0 1938 aa19.7■□□□□ 0.74
HDLBP-212ENST00000426343 PLXNA4Q9HCM2 1894 aa19.69■□□□□ 0.74
HDLBP-212ENST00000426343 ARHGEF35A5YM69 484 aa19.69■□□□□ 0.74
HDLBP-212ENST00000426343 DDHD2O94830 711 aa19.69■□□□□ 0.74
HDLBP-212ENST00000426343 ARF4P18085 180 aaPredicted RBP19.69■□□□□ 0.74
HDLBP-212ENST00000426343 CYP11B2P19099 503 aa19.69■□□□□ 0.74
HDLBP-212ENST00000426343 AFF1P51825 1210 aaKnown RBP19.69■□□□□ 0.74
HDLBP-212ENST00000426343 SYCE2Q6PIF2 218 aa19.69■□□□□ 0.74
HDLBP-212ENST00000426343 PADI6Q6TGC4 694 aa19.69■□□□□ 0.74
HDLBP-212ENST00000426343 MAEAQ7L5Y9 396 aa19.69■□□□□ 0.74
HDLBP-212ENST00000426343 HACE1Q8IYU2 909 aa19.69■□□□□ 0.74
HDLBP-212ENST00000426343 CASP10Q92851 521 aa19.69■□□□□ 0.74
HDLBP-212ENST00000426343 RNF39Q9H2S5 420 aa19.69■□□□□ 0.74
HDLBP-212ENST00000426343 LRWD1Q9UFC0 647 aa19.69■□□□□ 0.74
HDLBP-212ENST00000426343 GIT1Q9Y2X7 761 aa19.69■□□□□ 0.74
HDLBP-212ENST00000426343 A0A1B0GUA9 196 aa19.68■□□□□ 0.74
HDLBP-212ENST00000426343 LRRIQ4A6NIV6 560 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms