RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 FAM109BQ6ICB4 259 aaPredicted RBP26.97■■□□□ 1.91
VEGFA-209ENST00000425836 SLC24A5Q71RS6 500 aa26.97■■□□□ 1.91
VEGFA-209ENST00000425836 TMCO2Q7Z6W1 182 aaPredicted RBP26.97■■□□□ 1.91
VEGFA-209ENST00000425836 FAM178BQ8IXR5 827 aa26.97■■□□□ 1.91
VEGFA-209ENST00000425836 CCDC65Q8IXS2 484 aa26.97■■□□□ 1.91
VEGFA-209ENST00000425836 MYOCDQ8IZQ8 938 aa26.97■■□□□ 1.91
VEGFA-209ENST00000425836 CPB2Q96IY4 423 aa26.97■■□□□ 1.91
VEGFA-209ENST00000425836 SLC9A7Q96T83 725 aa26.97■■□□□ 1.91
VEGFA-209ENST00000425836 C1orf112Q9NSG2 853 aa26.97■■□□□ 1.91
VEGFA-209ENST00000425836 SEL1LQ9UBV2 794 aa26.97■■□□□ 1.91
VEGFA-209ENST00000425836 PHLPP2Q6ZVD8 1323 aa26.96■■□□□ 1.91
VEGFA-209ENST00000425836 TTLL13PA6NNM8 815 aa26.96■■□□□ 1.91
VEGFA-209ENST00000425836 C9IYK1 514 aa26.96■■□□□ 1.91
VEGFA-209ENST00000425836 NR1I2O75469 434 aa26.96■■□□□ 1.91
VEGFA-209ENST00000425836 AXLP30530 894 aa26.96■■□□□ 1.91
VEGFA-209ENST00000425836 HAUS6Q7Z4H7 955 aa26.96■■□□□ 1.91
VEGFA-209ENST00000425836 KCNN1Q92952 543 aa26.96■■□□□ 1.91
VEGFA-209ENST00000425836 DACT1Q9NYF0 836 aa26.96■■□□□ 1.91
VEGFA-209ENST00000425836 USP20Q9Y2K6 914 aa26.96■■□□□ 1.91
VEGFA-209ENST00000425836 NMT1P30419 496 aaKnown RBP26.95■■□□□ 1.9
VEGFA-209ENST00000425836 FAM189BP81408 668 aa26.95■■□□□ 1.9
VEGFA-209ENST00000425836 TWF2Q6IBS0 349 aaKnown RBP26.95■■□□□ 1.9
VEGFA-209ENST00000425836 TOP1MTQ969P6 601 aa26.95■■□□□ 1.9
VEGFA-209ENST00000425836 CNTNAP2Q9UHC6 1331 aa26.94■■□□□ 1.9
VEGFA-209ENST00000425836 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.94■■□□□ 1.9
VEGFA-209ENST00000425836 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.94■■□□□ 1.9
VEGFA-209ENST00000425836 GRXCR1A8MXD5 290 aa26.94■■□□□ 1.9
VEGFA-209ENST00000425836 H0YCG3 227 aa26.94■■□□□ 1.9
VEGFA-209ENST00000425836 K7ENM7 598 aa26.94■■□□□ 1.9
VEGFA-209ENST00000425836 GTPBP6O43824 516 aaPredicted RBP26.94■■□□□ 1.9
VEGFA-209ENST00000425836 SARSP49591 514 aaKnown RBP26.94■■□□□ 1.9
VEGFA-209ENST00000425836 COASYQ13057 564 aa26.94■■□□□ 1.9
VEGFA-209ENST00000425836 PRPF4BQ13523 1007 aaKnown RBP26.94■■□□□ 1.9
VEGFA-209ENST00000425836 LRIT3Q3SXY7 679 aa26.94■■□□□ 1.9
VEGFA-209ENST00000425836 NT5DC1Q5TFE4 455 aa26.94■■□□□ 1.9
VEGFA-209ENST00000425836 NOTUMQ6P988 496 aa26.94■■□□□ 1.9
VEGFA-209ENST00000425836 UNC13DQ70J99 1090 aa26.94■■□□□ 1.9
VEGFA-209ENST00000425836 HERC6Q8IVU3 1022 aa26.94■■□□□ 1.9
VEGFA-209ENST00000425836 CRIPAKQ8N1N5 446 aa26.94■■□□□ 1.9
VEGFA-209ENST00000425836 TRAIPQ9BWF2 469 aa26.94■■□□□ 1.9
VEGFA-209ENST00000425836 TBC1D7Q9P0N9 293 aa26.94■■□□□ 1.9
VEGFA-209ENST00000425836 A0A1B0GUA9 196 aa26.93■■□□□ 1.9
VEGFA-209ENST00000425836 MYL1P05976 194 aa26.93■■□□□ 1.9
VEGFA-209ENST00000425836 UBXN11Q5T124 520 aa26.93■■□□□ 1.9
VEGFA-209ENST00000425836 KANK3Q6NY19 840 aa26.93■■□□□ 1.9
VEGFA-209ENST00000425836 ZNF720Q7Z2F6 126 aa26.93■■□□□ 1.9
VEGFA-209ENST00000425836 ST6GALNAC4Q9H4F1 302 aa26.93■■□□□ 1.9
VEGFA-209ENST00000425836 MRPL44Q9H9J2 332 aaKnown RBP26.93■■□□□ 1.9
VEGFA-209ENST00000425836 OLFML3Q9NRN5 406 aa26.93■■□□□ 1.9
VEGFA-209ENST00000425836 A0A0U1RQF3 1178 aa26.92■■□□□ 1.9
VEGFA-209ENST00000425836 PVALEFA0A1B0GWK0 134 aa26.92■■□□□ 1.9
VEGFA-209ENST00000425836 PRR29P0C7W0 189 aa26.92■■□□□ 1.9
VEGFA-209ENST00000425836 SLC17A8Q8NDX2 589 aa26.92■■□□□ 1.9
VEGFA-209ENST00000425836 CCDC51Q96ER9 411 aa26.92■■□□□ 1.9
VEGFA-209ENST00000425836 TIGD1Q96MW7 591 aa26.92■■□□□ 1.9
VEGFA-209ENST00000425836 LMBRD1Q9NUN5 540 aa26.92■■□□□ 1.9
VEGFA-209ENST00000425836 KLRC4O43908 158 aa26.92■■□□□ 1.9
VEGFA-209ENST00000425836 UPP2O95045 317 aa26.92■■□□□ 1.9
VEGFA-209ENST00000425836 SCP2P22307 547 aa26.92■■□□□ 1.9
VEGFA-209ENST00000425836 GTF2BQ00403 316 aa26.92■■□□□ 1.9
VEGFA-209ENST00000425836 FAM117BQ6P1L5 589 aa26.92■■□□□ 1.9
VEGFA-209ENST00000425836 CDR2LQ86X02 465 aaPredicted RBP26.92■■□□□ 1.9
VEGFA-209ENST00000425836 ECHDC2Q86YB7 292 aa26.92■■□□□ 1.9
VEGFA-209ENST00000425836 HPS3Q969F9 1004 aa26.92■■□□□ 1.9
VEGFA-209ENST00000425836 TBX20Q9UMR3 447 aa26.92■■□□□ 1.9
VEGFA-209ENST00000425836 GJB5O95377 273 aa26.91■■□□□ 1.9
VEGFA-209ENST00000425836 IBSPP21815 317 aaPredicted RBP26.91■■□□□ 1.9
VEGFA-209ENST00000425836 EHHADHQ08426 723 aa26.91■■□□□ 1.9
VEGFA-209ENST00000425836 STRN3Q13033 797 aa26.91■■□□□ 1.9
VEGFA-209ENST00000425836 ZC2HC1CQ53FD0 456 aaPredicted RBP26.91■■□□□ 1.9
VEGFA-209ENST00000425836 NPAS4Q8IUM7 802 aa26.91■■□□□ 1.9
VEGFA-209ENST00000425836 CCDC34Q96HJ3 373 aa26.91■■□□□ 1.9
VEGFA-209ENST00000425836 STRA6Q9BX79 667 aa26.91■■□□□ 1.9
VEGFA-209ENST00000425836 MRPL4Q9BYD3 311 aaKnown RBP26.91■■□□□ 1.9
VEGFA-209ENST00000425836 FGFBP2Q9BYJ0 223 aa26.91■■□□□ 1.9
VEGFA-209ENST00000425836 FAM105AQ9NUU6 356 aa26.91■■□□□ 1.9
VEGFA-209ENST00000425836 RABGGTBP53611 331 aa26.9■■□□□ 1.9
VEGFA-209ENST00000425836 DPYDQ12882 1025 aa26.9■■□□□ 1.9
VEGFA-209ENST00000425836 TMEM132AQ24JP5 1023 aa26.9■■□□□ 1.9
VEGFA-209ENST00000425836 ACO2Q99798 780 aaKnown RBP26.9■■□□□ 1.9
VEGFA-209ENST00000425836 TARS2Q9BW92 718 aaKnown RBP26.9■■□□□ 1.9
VEGFA-209ENST00000425836 EIF2AQ9BY44 585 aaKnown RBP26.9■■□□□ 1.9
VEGFA-209ENST00000425836 PDZD7Q9H5P4 517 aa26.9■■□□□ 1.9
VEGFA-209ENST00000425836 ELAC1Q9H777 363 aaKnown RBP26.9■■□□□ 1.9
VEGFA-209ENST00000425836 PPP1R37O75864 691 aa26.89■■□□□ 1.9
VEGFA-209ENST00000425836 STAG3L1P0CL83 205 aa26.89■■□□□ 1.9
VEGFA-209ENST00000425836 CASP5P51878 434 aa26.89■■□□□ 1.9
VEGFA-209ENST00000425836 POSTNQ15063 836 aa26.89■■□□□ 1.9
VEGFA-209ENST00000425836 ATF7IP2Q5U623 682 aa26.89■■□□□ 1.9
VEGFA-209ENST00000425836 SLC27A1Q6PCB7 646 aa26.89■■□□□ 1.9
VEGFA-209ENST00000425836 ZNF598Q86UK7 904 aaKnown RBP26.89■■□□□ 1.9
VEGFA-209ENST00000425836 ZBED2Q9BTP6 218 aa26.89■■□□□ 1.9
VEGFA-209ENST00000425836 TMEM161AQ9NX61 479 aa26.89■■□□□ 1.9
VEGFA-209ENST00000425836 LRFN2Q9ULH4 789 aa26.89■■□□□ 1.9
VEGFA-209ENST00000425836 TNFSF13BQ9Y275 285 aa26.89■■□□□ 1.9
VEGFA-209ENST00000425836 PCDHB7Q9Y5E2 793 aa26.89■■□□□ 1.9
VEGFA-209ENST00000425836 PCDHB2Q9Y5E7 798 aa26.89■■□□□ 1.9
VEGFA-209ENST00000425836 N4BP3O15049 544 aa26.88■■□□□ 1.89
VEGFA-209ENST00000425836 KINO60870 393 aaKnown RBP26.88■■□□□ 1.89
VEGFA-209ENST00000425836 ZNF623O75123 536 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms