RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 GBP4Q96PP9 640 aa3.57□□□□□ -1.84
R3HDM1-205ENST00000425804 DCLRE1CQ96SD1 692 aaKnown RBP3.57□□□□□ -1.84
R3HDM1-205ENST00000425804 CATSPERZQ9NTU4 200 aa3.57□□□□□ -1.84
R3HDM1-205ENST00000425804 WIPF3A6NGB9 483 aa3.56□□□□□ -1.84
R3HDM1-205ENST00000425804 PRR23D1E9PI22 279 aaPredicted RBP3.56□□□□□ -1.84
R3HDM1-205ENST00000425804 CELA2AP08217 269 aa3.56□□□□□ -1.84
R3HDM1-205ENST00000425804 PRR23D2P0DMB1 279 aaPredicted RBP3.56□□□□□ -1.84
R3HDM1-205ENST00000425804 FGFR1P11362 822 aa3.56□□□□□ -1.84
R3HDM1-205ENST00000425804 TKTP29401 623 aaKnown RBP3.56□□□□□ -1.84
R3HDM1-205ENST00000425804 PTGER1P34995 402 aa3.56□□□□□ -1.84
R3HDM1-205ENST00000425804 RARRES1P49788 294 aa3.56□□□□□ -1.84
R3HDM1-205ENST00000425804 CACNA2D1P54289 1103 aa3.56□□□□□ -1.84
R3HDM1-205ENST00000425804 METTL24Q5JXM2 366 aa3.56□□□□□ -1.84
R3HDM1-205ENST00000425804 FOXB2Q5VYV0 432 aa3.56□□□□□ -1.84
R3HDM1-205ENST00000425804 BMP8AQ7Z5Y6 402 aa3.56□□□□□ -1.84
R3HDM1-205ENST00000425804 PLXDC1Q8IUK5 500 aa3.56□□□□□ -1.84
R3HDM1-205ENST00000425804 SGSM3Q96HU1 749 aa3.56□□□□□ -1.84
R3HDM1-205ENST00000425804 ADAM2Q99965 735 aa3.56□□□□□ -1.84
R3HDM1-205ENST00000425804 TEX101Q9BY14 249 aa3.56□□□□□ -1.84
R3HDM1-205ENST00000425804 KLK15Q9H2R5 256 aa3.56□□□□□ -1.84
R3HDM1-205ENST00000425804 PFDN2Q9UHV9 154 aa3.56□□□□□ -1.84
R3HDM1-205ENST00000425804 CBLCQ9ULV8 474 aa3.56□□□□□ -1.84
R3HDM1-205ENST00000425804 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.56□□□□□ -1.84
R3HDM1-205ENST00000425804 ASB1Q9Y576 335 aa3.56□□□□□ -1.84
R3HDM1-205ENST00000425804 DCAF1Q9Y4B6 1507 aa3.55□□□□□ -1.84
R3HDM1-205ENST00000425804 TRAV20A0A0B4J274 112 aa3.55□□□□□ -1.84
R3HDM1-205ENST00000425804 RASSF10A6NK89 507 aa3.55□□□□□ -1.84
R3HDM1-205ENST00000425804 CCDC85CA6NKD9 419 aa3.55□□□□□ -1.84
R3HDM1-205ENST00000425804 ZNF561-AS1K7EIQ3 104 aa3.55□□□□□ -1.84
R3HDM1-205ENST00000425804 TP73O15350 636 aa3.55□□□□□ -1.84
R3HDM1-205ENST00000425804 SPDEFO95238 335 aa3.55□□□□□ -1.84
R3HDM1-205ENST00000425804 ITGAMP11215 1152 aa3.55□□□□□ -1.84
R3HDM1-205ENST00000425804 PYGMP11217 842 aa3.55□□□□□ -1.84
R3HDM1-205ENST00000425804 DDX6P26196 483 aaKnown RBP eCLIP3.55□□□□□ -1.84
R3HDM1-205ENST00000425804 EZH2Q15910 746 aaKnown RBP3.55□□□□□ -1.84
R3HDM1-205ENST00000425804 SRSF7Q16629 238 aaKnown RBP eCLIP3.55□□□□□ -1.84
R3HDM1-205ENST00000425804 TM4SF20Q53R12 229 aa3.55□□□□□ -1.84
R3HDM1-205ENST00000425804 OR5AN1Q8NGI8 311 aa3.55□□□□□ -1.84
R3HDM1-205ENST00000425804 ZNF48Q96MX3 618 aaPredicted RBP3.55□□□□□ -1.84
R3HDM1-205ENST00000425804 ALOXE3Q9BYJ1 711 aa3.55□□□□□ -1.84
R3HDM1-205ENST00000425804 UNC13AQ9UPW8 1703 aa3.55□□□□□ -1.84
R3HDM1-205ENST00000425804 GOLGA6L22H0YM25 854 aa3.54□□□□□ -1.84
R3HDM1-205ENST00000425804 H3BNC9 293 aa3.54□□□□□ -1.84
R3HDM1-205ENST00000425804 LEFTY2O00292 366 aa3.54□□□□□ -1.84
R3HDM1-205ENST00000425804 WNT9AO14904 365 aa3.54□□□□□ -1.84
R3HDM1-205ENST00000425804 FOXP2O15409 715 aa3.54□□□□□ -1.84
R3HDM1-205ENST00000425804 HOXA3O43365 443 aaPredicted RBP3.54□□□□□ -1.84
R3HDM1-205ENST00000425804 ADCY3O60266 1144 aa3.54□□□□□ -1.84
R3HDM1-205ENST00000425804 DIAPH1O60610 1272 aaKnown RBP3.54□□□□□ -1.84
R3HDM1-205ENST00000425804 NTN1O95631 604 aa3.54□□□□□ -1.84
R3HDM1-205ENST00000425804 NCLP19338 710 aaKnown RBP3.54□□□□□ -1.84
R3HDM1-205ENST00000425804 FOXG1P55316 489 aaPredicted RBP3.54□□□□□ -1.84
R3HDM1-205ENST00000425804 IFRD2Q12894 506 aaPredicted RBP3.54□□□□□ -1.84
R3HDM1-205ENST00000425804 PAK1Q13153 545 aa3.54□□□□□ -1.84
R3HDM1-205ENST00000425804 FAM209AQ5JX71 171 aa3.54□□□□□ -1.84
R3HDM1-205ENST00000425804 C11orf87Q6NUJ2 197 aa3.54□□□□□ -1.84
R3HDM1-205ENST00000425804 GLB1L3Q8NCI6 653 aaPredicted RBP3.54□□□□□ -1.84
R3HDM1-205ENST00000425804 ST13P5Q8NFI4 369 aaPredicted RBP3.54□□□□□ -1.84
R3HDM1-205ENST00000425804 FBXW5Q969U6 566 aa3.54□□□□□ -1.84
R3HDM1-205ENST00000425804 PDCD2LQ9BRP1 358 aa3.54□□□□□ -1.84
R3HDM1-205ENST00000425804 TRIM55Q9BYV6 548 aa3.54□□□□□ -1.84
R3HDM1-205ENST00000425804 SMURF1Q9HCE7 757 aa3.54□□□□□ -1.84
R3HDM1-205ENST00000425804 MYO15BQ96JP2 1530 aa3.54□□□□□ -1.84
R3HDM1-205ENST00000425804 ZSCAN20P17040 1043 aaPredicted RBP3.53□□□□□ -1.84
R3HDM1-205ENST00000425804 RNASE9P60153 205 aaKnown RBP3.53□□□□□ -1.84
R3HDM1-205ENST00000425804 DGKDQ16760 1214 aa3.53□□□□□ -1.84
R3HDM1-205ENST00000425804 NAALADL2Q58DX5 795 aa3.53□□□□□ -1.84
R3HDM1-205ENST00000425804 PIK3R6Q5UE93 754 aa3.53□□□□□ -1.84
R3HDM1-205ENST00000425804 KIAA1614Q5VZ46 1190 aa3.53□□□□□ -1.84
R3HDM1-205ENST00000425804 ZBTB8BQ8NAP8 495 aaPredicted RBP3.53□□□□□ -1.84
R3HDM1-205ENST00000425804 SPATA9Q9BWV2 254 aa3.53□□□□□ -1.84
R3HDM1-205ENST00000425804 C14orf93Q9H972 538 aaKnown RBP3.53□□□□□ -1.84
R3HDM1-205ENST00000425804 MTMR4Q9NYA4 1195 aa3.53□□□□□ -1.84
R3HDM1-205ENST00000425804 MSRB2Q9Y3D2 182 aa3.53□□□□□ -1.84
R3HDM1-205ENST00000425804 PCDHA8Q9Y5H6 950 aa3.53□□□□□ -1.84
R3HDM1-205ENST00000425804 NACADO15069 1562 aa3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 IQCA1LA6NCM1 817 aa3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 SERINC4A6NH21 518 aa3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 SCDO00767 359 aa3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 PDPK1O15530 556 aa3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 DNAJC6O75061 913 aa3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 STK10O94804 968 aaKnown RBP3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 C6orf222P0C671 652 aaPredicted RBP3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 FAM153BP0C7A2 387 aa3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 KIR2DL3P43628 341 aa3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 ALDH6A1Q02252 535 aaKnown RBP3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 CRY1Q16526 586 aa3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 DDB1Q16531 1140 aa3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 ATG9BQ674R7 924 aa3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 C16orf59Q7L2K0 433 aa3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 FAM83AQ86UY5 434 aa3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 LRRC47Q8N1G4 583 aaKnown RBP3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 DRC1Q96MC2 740 aa3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 WDR92Q96MX6 357 aa3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 LSM14BQ9BX40 385 aaKnown RBP3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 EPC1Q9H2F5 836 aa3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 FOXJ2Q9P0K8 574 aa3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 RNF181Q9P0P0 153 aa3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 ARPP21Q9UBL0 812 aaPredicted RBP3.52□□□□□ -1.85
R3HDM1-205ENST00000425804 RB1CC1Q8TDY2 1594 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms