RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 IFT57Q9NWB7 429 aa7.13□□□□□ -1.27
LINC01040-201ENST00000425048 OXSMQ9NWU1 459 aa7.13□□□□□ -1.27
LINC01040-201ENST00000425048 HDAC5Q9UQL6 1122 aa7.13□□□□□ -1.27
LINC01040-201ENST00000425048 GRID2IPA4D2P6 1211 aa7.12□□□□□ -1.27
LINC01040-201ENST00000425048 ZAR1LA6NP61 321 aa7.12□□□□□ -1.27
LINC01040-201ENST00000425048 VPS72Q15906 364 aa7.12□□□□□ -1.27
LINC01040-201ENST00000425048 HECTD2Q5U5R9 776 aa7.12□□□□□ -1.27
LINC01040-201ENST00000425048 PIK3C3Q8NEB9 887 aa7.12□□□□□ -1.27
LINC01040-201ENST00000425048 MYEOVQ96EZ4 313 aa7.12□□□□□ -1.27
LINC01040-201ENST00000425048 NDC1Q9BTX1 674 aa7.12□□□□□ -1.27
LINC01040-201ENST00000425048 SLC46A2Q9BY10 475 aa7.12□□□□□ -1.27
LINC01040-201ENST00000425048 PTGFRNQ9P2B2 879 aa7.12□□□□□ -1.27
LINC01040-201ENST00000425048 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.12□□□□□ -1.27
LINC01040-201ENST00000425048 AHRRA9YTQ3 701 aa7.11□□□□□ -1.27
LINC01040-201ENST00000425048 PCDH8O95206 1070 aa7.11□□□□□ -1.27
LINC01040-201ENST00000425048 SDSP20132 328 aa7.11□□□□□ -1.27
LINC01040-201ENST00000425048 CD40P25942 277 aa7.11□□□□□ -1.27
LINC01040-201ENST00000425048 CASRP41180 1078 aa7.11□□□□□ -1.27
LINC01040-201ENST00000425048 CD69Q07108 199 aa7.11□□□□□ -1.27
LINC01040-201ENST00000425048 MRPL49Q13405 166 aaKnown RBP7.11□□□□□ -1.27
LINC01040-201ENST00000425048 CREB3L3Q68CJ9 461 aa7.11□□□□□ -1.27
LINC01040-201ENST00000425048 OR52N2Q8NGI0 321 aa7.11□□□□□ -1.27
LINC01040-201ENST00000425048 ZNF768Q9H5H4 540 aaKnown RBP7.11□□□□□ -1.27
LINC01040-201ENST00000425048 WNT3AP56704 352 aa7.1□□□□□ -1.27
LINC01040-201ENST00000425048 LRRC32Q14392 662 aa7.1□□□□□ -1.27
LINC01040-201ENST00000425048 STRIP1Q5VSL9 837 aa7.1□□□□□ -1.27
LINC01040-201ENST00000425048 OLFML1Q6UWY5 402 aa7.1□□□□□ -1.27
LINC01040-201ENST00000425048 PRIMA1Q86XR5 153 aa7.1□□□□□ -1.27
LINC01040-201ENST00000425048 PASD1Q8IV76 773 aa7.1□□□□□ -1.27
LINC01040-201ENST00000425048 IL17RAQ96F46 866 aa7.1□□□□□ -1.27
LINC01040-201ENST00000425048 DCLRE1CQ96SD1 692 aaKnown RBP7.1□□□□□ -1.27
LINC01040-201ENST00000425048 ORAI3Q9BRQ5 295 aa7.1□□□□□ -1.27
LINC01040-201ENST00000425048 ZMAT4Q9H898 229 aa7.1□□□□□ -1.27
LINC01040-201ENST00000425048 PODXL2Q9NZ53 605 aa7.1□□□□□ -1.27
LINC01040-201ENST00000425048 PCDHB6Q9Y5E3 794 aa7.1□□□□□ -1.27
LINC01040-201ENST00000425048 CENPVL1A0A0U1RR11 272 aa7.09□□□□□ -1.27
LINC01040-201ENST00000425048 LY86O95711 162 aa7.09□□□□□ -1.27
LINC01040-201ENST00000425048 CFBP00751 764 aa7.09□□□□□ -1.27
LINC01040-201ENST00000425048 ATP2A2P16615 1042 aaKnown RBP7.09□□□□□ -1.27
LINC01040-201ENST00000425048 ZFP36P26651 326 aaKnown RBP7.09□□□□□ -1.27
LINC01040-201ENST00000425048 USP14P54578 494 aa7.09□□□□□ -1.27
LINC01040-201ENST00000425048 MRPS21P82921 87 aaKnown RBP7.09□□□□□ -1.27
LINC01040-201ENST00000425048 SQSTM1Q13501 440 aa7.09□□□□□ -1.27
LINC01040-201ENST00000425048 NFE2L2Q16236 605 aa7.09□□□□□ -1.27
LINC01040-201ENST00000425048 DOK3Q7L591 496 aa7.09□□□□□ -1.27
LINC01040-201ENST00000425048 TAS1R1Q7RTX1 841 aa7.09□□□□□ -1.27
LINC01040-201ENST00000425048 KIF18BQ86Y91 864 aa7.09□□□□□ -1.27
LINC01040-201ENST00000425048 CDYL2Q8N8U2 506 aa7.09□□□□□ -1.27
LINC01040-201ENST00000425048 CPEB1Q9BZB8 566 aaKnown RBP7.09□□□□□ -1.27
LINC01040-201ENST00000425048 OSBPL2Q9H1P3 480 aa7.09□□□□□ -1.27
LINC01040-201ENST00000425048 CDK11AQ9UQ88 783 aaPredicted RBP7.09□□□□□ -1.27
LINC01040-201ENST00000425048 CLCA2Q9UQC9 943 aa7.09□□□□□ -1.27
LINC01040-201ENST00000425048 ELL2O00472 640 aaPredicted RBP7.08□□□□□ -1.28
LINC01040-201ENST00000425048 PPP1R12AO14974 1030 aaPredicted RBP7.08□□□□□ -1.28
LINC01040-201ENST00000425048 RFPL3O75679 317 aa7.08□□□□□ -1.28
LINC01040-201ENST00000425048 LMO1P25800 156 aa7.08□□□□□ -1.28
LINC01040-201ENST00000425048 GZMKP49863 264 aa7.08□□□□□ -1.28
LINC01040-201ENST00000425048 PTTG1IPP53801 180 aa7.08□□□□□ -1.28
LINC01040-201ENST00000425048 ESPNLQ6ZVH7 1005 aa7.08□□□□□ -1.28
LINC01040-201ENST00000425048 SUPT20HQ8NEM7 779 aa7.08□□□□□ -1.28
LINC01040-201ENST00000425048 ZNF764Q96H86 408 aaPredicted RBP7.08□□□□□ -1.28
LINC01040-201ENST00000425048 LSM14BQ9BX40 385 aaKnown RBP7.08□□□□□ -1.28
LINC01040-201ENST00000425048 SERHL2Q9H4I8 314 aa7.08□□□□□ -1.28
LINC01040-201ENST00000425048 TRPM5Q9NZQ8 1165 aa7.08□□□□□ -1.28
LINC01040-201ENST00000425048 H2AFY2Q9P0M6 372 aaPredicted RBP7.08□□□□□ -1.28
LINC01040-201ENST00000425048 USP36Q9P275 1121 aaKnown RBP7.08□□□□□ -1.28
LINC01040-201ENST00000425048 MAGEC2Q9UBF1 373 aaPredicted RBP7.08□□□□□ -1.28
LINC01040-201ENST00000425048 USP18Q9UMW8 372 aa7.08□□□□□ -1.28
LINC01040-201ENST00000425048 TMEM200CA6NKL6 621 aa7.07□□□□□ -1.28
LINC01040-201ENST00000425048 RNASET2O00584 256 aaKnown RBP7.07□□□□□ -1.28
LINC01040-201ENST00000425048 GAS7O60861 476 aa7.07□□□□□ -1.28
LINC01040-201ENST00000425048 HSP90B1P14625 803 aaKnown RBP7.07□□□□□ -1.28
LINC01040-201ENST00000425048 XPAP23025 273 aaPredicted RBP7.07□□□□□ -1.28
LINC01040-201ENST00000425048 APOBEC3AP31941 199 aaPredicted RBP7.07□□□□□ -1.28
LINC01040-201ENST00000425048 ZEB1P37275 1124 aaPredicted RBP7.07□□□□□ -1.28
LINC01040-201ENST00000425048 DUSP2Q05923 314 aa7.07□□□□□ -1.28
LINC01040-201ENST00000425048 SF3A1Q15459 793 aaKnown RBP7.07□□□□□ -1.28
LINC01040-201ENST00000425048 GDF7Q7Z4P5 450 aa7.07□□□□□ -1.28
LINC01040-201ENST00000425048 LILRA3Q8N6C8 439 aaPredicted RBP7.07□□□□□ -1.28
LINC01040-201ENST00000425048 EFHBQ8N7U6 833 aa7.07□□□□□ -1.28
LINC01040-201ENST00000425048 BEND2Q8NDZ0 799 aa7.07□□□□□ -1.28
LINC01040-201ENST00000425048 WDR11Q9BZH6 1224 aa7.07□□□□□ -1.28
LINC01040-201ENST00000425048 SYNPO2LQ9H987 977 aa7.07□□□□□ -1.28
LINC01040-201ENST00000425048 INTS7Q9NVH2 962 aaKnown RBP7.07□□□□□ -1.28
LINC01040-201ENST00000425048 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.07□□□□□ -1.28
LINC01040-201ENST00000425048 ST20-MTHFSA0A0A6YYL1 179 aa7.06□□□□□ -1.28
LINC01040-201ENST00000425048 GAGE12BA1L429 117 aa7.06□□□□□ -1.28
LINC01040-201ENST00000425048 GAGE12HA6NDE8 117 aa7.06□□□□□ -1.28
LINC01040-201ENST00000425048 PRR5-ARHGAP8B1AHC4 643 aa7.06□□□□□ -1.28
LINC01040-201ENST00000425048 MASP2O00187 686 aa7.06□□□□□ -1.28
LINC01040-201ENST00000425048 NRP2O60462 931 aa7.06□□□□□ -1.28
LINC01040-201ENST00000425048 LPXNO60711 386 aa7.06□□□□□ -1.28
LINC01040-201ENST00000425048 F2P00734 622 aa7.06□□□□□ -1.28
LINC01040-201ENST00000425048 GPR15P49685 360 aa7.06□□□□□ -1.28
LINC01040-201ENST00000425048 FAM189BP81408 668 aa7.06□□□□□ -1.28
LINC01040-201ENST00000425048 ADGRG3Q86Y34 549 aa7.06□□□□□ -1.28
LINC01040-201ENST00000425048 ARHGEF19Q8IW93 802 aa7.06□□□□□ -1.28
LINC01040-201ENST00000425048 LCORLQ8N3X6 602 aa7.06□□□□□ -1.28
LINC01040-201ENST00000425048 GAB3Q8WWW8 586 aa7.06□□□□□ -1.28
LINC01040-201ENST00000425048 FERMT2Q96AC1 680 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms