RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 PPP2R3CQ969Q6 453 aa24.28■■□□□ 1.48
TRAF4-204ENST00000422344 ZNF558Q96NG5 402 aa24.28■■□□□ 1.48
TRAF4-204ENST00000422344 BHMT2Q9H2M3 363 aa24.28■■□□□ 1.48
TRAF4-204ENST00000422344 CWH43Q9H720 699 aa24.28■■□□□ 1.48
TRAF4-204ENST00000422344 TRIOO75962 3097 aa24.28■■□□□ 1.48
TRAF4-204ENST00000422344 C19orf67A6NJJ6 358 aa24.27■■□□□ 1.48
TRAF4-204ENST00000422344 PP2D1A8MPX8 630 aa24.27■■□□□ 1.48
TRAF4-204ENST00000422344 ZNF623O75123 536 aa24.27■■□□□ 1.48
TRAF4-204ENST00000422344 FGF18O76093 207 aa24.27■■□□□ 1.48
TRAF4-204ENST00000422344 CYP11B2P19099 503 aa24.27■■□□□ 1.48
TRAF4-204ENST00000422344 AXLP30530 894 aa24.27■■□□□ 1.48
TRAF4-204ENST00000422344 UBE3AQ05086 875 aa24.27■■□□□ 1.48
TRAF4-204ENST00000422344 MBTD1Q05BQ5 628 aa24.27■■□□□ 1.48
TRAF4-204ENST00000422344 DLX2Q07687 328 aaPredicted RBP24.27■■□□□ 1.48
TRAF4-204ENST00000422344 ECM1Q16610 540 aa24.27■■□□□ 1.48
TRAF4-204ENST00000422344 CTC1Q2NKJ3 1217 aa24.27■■□□□ 1.48
TRAF4-204ENST00000422344 ALYREFQ86V81 257 aaKnown RBP24.27■■□□□ 1.48
TRAF4-204ENST00000422344 ZBTB8OSQ8IWT0 167 aa24.27■■□□□ 1.48
TRAF4-204ENST00000422344 LPPQ93052 612 aa24.27■■□□□ 1.48
TRAF4-204ENST00000422344 NFKBIZQ9BYH8 718 aa24.27■■□□□ 1.48
TRAF4-204ENST00000422344 K7ELQ4 463 aaPredicted RBP24.26■■□□□ 1.47
TRAF4-204ENST00000422344 TSPAN1O60635 241 aa24.26■■□□□ 1.47
TRAF4-204ENST00000422344 PPM1AP35813 382 aa24.26■■□□□ 1.47
TRAF4-204ENST00000422344 ZRSR1Q15695 479 aaKnown RBP24.26■■□□□ 1.47
TRAF4-204ENST00000422344 IL17AQ16552 155 aa24.26■■□□□ 1.47
TRAF4-204ENST00000422344 NOTUMQ6P988 496 aa24.26■■□□□ 1.47
TRAF4-204ENST00000422344 LRRC55Q6ZSA7 311 aa24.26■■□□□ 1.47
TRAF4-204ENST00000422344 CCDC51Q96ER9 411 aa24.26■■□□□ 1.47
TRAF4-204ENST00000422344 IGFLR1Q9H665 355 aa24.26■■□□□ 1.47
TRAF4-204ENST00000422344 DNM3Q9UQ16 869 aa24.26■■□□□ 1.47
TRAF4-204ENST00000422344 INPP5FQ9Y2H2 1132 aa24.26■■□□□ 1.47
TRAF4-204ENST00000422344 VWA3AA6NCI4 1184 aa24.25■■□□□ 1.47
TRAF4-204ENST00000422344 DNAJB1P25685 340 aa24.25■■□□□ 1.47
TRAF4-204ENST00000422344 HOXA11P31270 313 aaPredicted RBP24.25■■□□□ 1.47
TRAF4-204ENST00000422344 GTF2F1P35269 517 aaKnown RBP eCLIP24.25■■□□□ 1.471e-10■■■■□ 26.4
TRAF4-204ENST00000422344 IRS1P35568 1242 aa24.25■■□□□ 1.47
TRAF4-204ENST00000422344 ARL6IP4Q66PJ3 421 aaKnown RBP24.25■■□□□ 1.47
TRAF4-204ENST00000422344 KCNT2Q6UVM3 1135 aa24.25■■□□□ 1.47
TRAF4-204ENST00000422344 CNNM3Q8NE01 707 aa24.25■■□□□ 1.47
TRAF4-204ENST00000422344 MICAL1Q8TDZ2 1067 aa24.25■■□□□ 1.47
TRAF4-204ENST00000422344 INTS4Q96HW7 963 aaKnown RBP24.25■■□□□ 1.47
TRAF4-204ENST00000422344 PUF60Q9UHX1 559 aaKnown RBP24.25■■□□□ 1.47
TRAF4-204ENST00000422344 BMP15O95972 392 aa24.24■■□□□ 1.47
TRAF4-204ENST00000422344 CDC25AP30304 524 aa24.24■■□□□ 1.47
TRAF4-204ENST00000422344 RNASELQ05823 741 aaKnown RBP24.24■■□□□ 1.47
TRAF4-204ENST00000422344 PPP2R5AQ15172 486 aa24.24■■□□□ 1.47
TRAF4-204ENST00000422344 SMAD2Q15796 467 aaKnown RBP24.24■■□□□ 1.47
TRAF4-204ENST00000422344 NOMO2Q5JPE7 1267 aa24.24■■□□□ 1.47
TRAF4-204ENST00000422344 URGCPQ8TCY9 931 aa24.24■■□□□ 1.47
TRAF4-204ENST00000422344 CPB2Q96IY4 423 aa24.24■■□□□ 1.47
TRAF4-204ENST00000422344 CDK5RAP3Q96JB5 506 aa24.24■■□□□ 1.47
TRAF4-204ENST00000422344 TRIM6Q9C030 488 aaPredicted RBP24.24■■□□□ 1.47
TRAF4-204ENST00000422344 C2orf40Q9H1Z8 148 aa24.24■■□□□ 1.47
TRAF4-204ENST00000422344 TLR9Q9NR96 1032 aa24.24■■□□□ 1.47
TRAF4-204ENST00000422344 WDFY4Q6ZS81 3184 aa24.24■■□□□ 1.47
TRAF4-204ENST00000422344 MBTPS2O43462 519 aa24.23■■□□□ 1.47
TRAF4-204ENST00000422344 EYA4O95677 639 aa24.23■■□□□ 1.47
TRAF4-204ENST00000422344 KRT17Q04695 432 aa24.23■■□□□ 1.47
TRAF4-204ENST00000422344 CAMK1Q14012 370 aa24.23■■□□□ 1.47
TRAF4-204ENST00000422344 UBXN11Q5T124 520 aa24.23■■□□□ 1.47
TRAF4-204ENST00000422344 DEPTORQ8TB45 409 aa24.23■■□□□ 1.47
TRAF4-204ENST00000422344 KIFAP3Q92845 792 aa24.23■■□□□ 1.47
TRAF4-204ENST00000422344 IFT74Q96LB3 600 aa24.23■■□□□ 1.47
TRAF4-204ENST00000422344 CSRNP2Q9H175 543 aa24.23■■□□□ 1.47
TRAF4-204ENST00000422344 RSAD1Q9HA92 442 aa24.23■■□□□ 1.47
TRAF4-204ENST00000422344 FOXD4L1Q9NU39 408 aa24.23■■□□□ 1.47
TRAF4-204ENST00000422344 SPG21Q9NZD8 308 aa24.23■■□□□ 1.47
TRAF4-204ENST00000422344 CNTNAP2Q9UHC6 1331 aa24.23■■□□□ 1.47
TRAF4-204ENST00000422344 CARNS1A5YM72 827 aa24.22■■□□□ 1.47
TRAF4-204ENST00000422344 MEIS3P2A8K0S8 358 aa24.22■■□□□ 1.47
TRAF4-204ENST00000422344 E9PMD0 336 aa24.22■■□□□ 1.47
TRAF4-204ENST00000422344 LINC01565O15544 149 aa24.22■■□□□ 1.47
TRAF4-204ENST00000422344 TBX10O75333 385 aa24.22■■□□□ 1.47
TRAF4-204ENST00000422344 ITGA4P13612 1032 aa24.22■■□□□ 1.47
TRAF4-204ENST00000422344 PBX3P40426 434 aa24.22■■□□□ 1.47
TRAF4-204ENST00000422344 NAMPTP43490 491 aa24.22■■□□□ 1.47
TRAF4-204ENST00000422344 ALDH7A1P49419 539 aaKnown RBP24.22■■□□□ 1.47
TRAF4-204ENST00000422344 TMEM132AQ24JP5 1023 aa24.22■■□□□ 1.47
TRAF4-204ENST00000422344 MRPL10Q7Z7H8 261 aaKnown RBP24.22■■□□□ 1.47
TRAF4-204ENST00000422344 HACE1Q8IYU2 909 aa24.22■■□□□ 1.47
TRAF4-204ENST00000422344 MRPS27Q92552 414 aaKnown RBP24.22■■□□□ 1.47
TRAF4-204ENST00000422344 UBN1Q9NPG3 1134 aa24.22■■□□□ 1.47
TRAF4-204ENST00000422344 PRMT7Q9NVM4 692 aaPredicted RBP24.22■■□□□ 1.47
TRAF4-204ENST00000422344 LZTS1Q9Y250 596 aa24.22■■□□□ 1.47
TRAF4-204ENST00000422344 PLXNA4Q9HCM2 1894 aa24.21■■□□□ 1.47
TRAF4-204ENST00000422344 ZC3H11AO75152 810 aaKnown RBP eCLIP24.21■■□□□ 1.47
TRAF4-204ENST00000422344 OFD1O75665 1012 aa24.21■■□□□ 1.47
TRAF4-204ENST00000422344 ARF4P18085 180 aaPredicted RBP24.21■■□□□ 1.47
TRAF4-204ENST00000422344 NCLP19338 710 aaKnown RBP24.21■■□□□ 1.47
TRAF4-204ENST00000422344 PLCB3Q01970 1234 aa24.21■■□□□ 1.47
TRAF4-204ENST00000422344 AMHR2Q16671 573 aa24.21■■□□□ 1.47
TRAF4-204ENST00000422344 CDCA2Q69YH5 1023 aaPredicted RBP24.21■■□□□ 1.47
TRAF4-204ENST00000422344 AGMOQ6ZNB7 445 aa24.21■■□□□ 1.47
TRAF4-204ENST00000422344 PRIMPOLQ96LW4 560 aa24.21■■□□□ 1.47
TRAF4-204ENST00000422344 POP1Q99575 1024 aaKnown RBP24.21■■□□□ 1.47
TRAF4-204ENST00000422344 MMTAG2Q9BU76 263 aaKnown RBP24.21■■□□□ 1.47
TRAF4-204ENST00000422344 EIF2AQ9BY44 585 aaKnown RBP24.21■■□□□ 1.47
TRAF4-204ENST00000422344 NT5C3AQ9H0P0 336 aa24.21■■□□□ 1.47
TRAF4-204ENST00000422344 TBC1D13Q9NVG8 400 aa24.21■■□□□ 1.47
TRAF4-204ENST00000422344 IPPQ9Y573 584 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms