RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 MYMKA6NI61 221 aa17.36■□□□□ 0.37
BRAT1-202ENST00000421712 B4GALT5O43286 388 aa17.36■□□□□ 0.37
BRAT1-202ENST00000421712 IDEP14735 1019 aa17.36■□□□□ 0.37
BRAT1-202ENST00000421712 ARF4P18085 180 aaPredicted RBP17.36■□□□□ 0.37
BRAT1-202ENST00000421712 HOXA11P31270 313 aaPredicted RBP17.36■□□□□ 0.37
BRAT1-202ENST00000421712 STRN3Q13033 797 aa17.36■□□□□ 0.37
BRAT1-202ENST00000421712 BTG3Q14201 252 aaPredicted RBP17.36■□□□□ 0.37
BRAT1-202ENST00000421712 PAN2Q504Q3 1202 aaKnown RBP17.36■□□□□ 0.37
BRAT1-202ENST00000421712 Q7L0L9 218 aa17.36■□□□□ 0.37
BRAT1-202ENST00000421712 ABI1Q8IZP0 508 aa17.36■□□□□ 0.37
BRAT1-202ENST00000421712 DEFB123Q8N688 67 aa17.36■□□□□ 0.37
BRAT1-202ENST00000421712 SPIRE2Q8WWL2 714 aa17.36■□□□□ 0.37
BRAT1-202ENST00000421712 PRIMPOLQ96LW4 560 aa17.36■□□□□ 0.37
BRAT1-202ENST00000421712 IPO9Q96P70 1041 aaKnown RBP17.36■□□□□ 0.37
BRAT1-202ENST00000421712 FZD8Q9H461 694 aa17.36■□□□□ 0.37
BRAT1-202ENST00000421712 ELAC1Q9H777 363 aaKnown RBP17.36■□□□□ 0.37
BRAT1-202ENST00000421712 FAM105AQ9NUU6 356 aa17.36■□□□□ 0.37
BRAT1-202ENST00000421712 TBKBP1A7MCY6 615 aa17.35■□□□□ 0.37
BRAT1-202ENST00000421712 H0YCG3 227 aa17.35■□□□□ 0.37
BRAT1-202ENST00000421712 ACKR2O00590 384 aa17.35■□□□□ 0.37
BRAT1-202ENST00000421712 DGKIO75912 1065 aa17.35■□□□□ 0.37
BRAT1-202ENST00000421712 FGFR1P11362 822 aa17.35■□□□□ 0.37
BRAT1-202ENST00000421712 PFKFB1P16118 471 aa17.35■□□□□ 0.37
BRAT1-202ENST00000421712 GATMP50440 423 aa17.35■□□□□ 0.37
BRAT1-202ENST00000421712 RAB27AP51159 221 aa17.35■□□□□ 0.37
BRAT1-202ENST00000421712 HTRA4P83105 476 aaPredicted RBP17.35■□□□□ 0.37
BRAT1-202ENST00000421712 E2F4Q16254 413 aa17.35■□□□□ 0.37
BRAT1-202ENST00000421712 AMHR2Q16671 573 aa17.35■□□□□ 0.37
BRAT1-202ENST00000421712 FAM187BQ17R55 369 aa17.35■□□□□ 0.37
BRAT1-202ENST00000421712 CSPP1Q1MSJ5 1256 aa17.35■□□□□ 0.37
BRAT1-202ENST00000421712 PPP4R3CPQ6ZMV5 832 aa17.35■□□□□ 0.37
BRAT1-202ENST00000421712 CDR2LQ86X02 465 aaPredicted RBP17.35■□□□□ 0.37
BRAT1-202ENST00000421712 FIBCD1Q8N539 461 aa17.35■□□□□ 0.37
BRAT1-202ENST00000421712 FSIP1Q8NA03 581 aa17.35■□□□□ 0.37
BRAT1-202ENST00000421712 PGBD4Q96DM1 585 aa17.35■□□□□ 0.37
BRAT1-202ENST00000421712 SEMA6BQ9H3T3 888 aa17.35■□□□□ 0.37
BRAT1-202ENST00000421712 TMEM134Q9H6X4 195 aa17.35■□□□□ 0.37
BRAT1-202ENST00000421712 CERS4Q9HA82 394 aa17.35■□□□□ 0.37
BRAT1-202ENST00000421712 USP20Q9Y2K6 914 aa17.35■□□□□ 0.37
BRAT1-202ENST00000421712 PCDHB2Q9Y5E7 798 aa17.35■□□□□ 0.37
BRAT1-202ENST00000421712 PHLPP2Q6ZVD8 1323 aa17.35■□□□□ 0.37
BRAT1-202ENST00000421712 ADGRA3Q8IWK6 1321 aa17.35■□□□□ 0.37
BRAT1-202ENST00000421712 TMEM265A0A087WTH1 108 aa17.34■□□□□ 0.37
BRAT1-202ENST00000421712 K7ENM7 598 aa17.34■□□□□ 0.37
BRAT1-202ENST00000421712 HOXA2O43364 376 aa17.34■□□□□ 0.37
BRAT1-202ENST00000421712 TRAK2O60296 914 aa17.34■□□□□ 0.37
BRAT1-202ENST00000421712 EOMESO95936 686 aa17.34■□□□□ 0.37
BRAT1-202ENST00000421712 SYKP43405 635 aa17.34■□□□□ 0.37
BRAT1-202ENST00000421712 SPOUT1Q5T280 376 aaKnown RBP17.34■□□□□ 0.37
BRAT1-202ENST00000421712 FAM178BQ8IXR5 827 aa17.34■□□□□ 0.37
BRAT1-202ENST00000421712 MRPS27Q92552 414 aaKnown RBP17.34■□□□□ 0.37
BRAT1-202ENST00000421712 CCDC51Q96ER9 411 aa17.34■□□□□ 0.37
BRAT1-202ENST00000421712 ADPGKQ9BRR6 497 aa17.34■□□□□ 0.37
BRAT1-202ENST00000421712 NTPCRQ9BSD7 190 aaKnown RBP17.34■□□□□ 0.37
BRAT1-202ENST00000421712 TRAIPQ9BWF2 469 aa17.34■□□□□ 0.37
BRAT1-202ENST00000421712 CCDC113Q9H0I3 377 aa17.34■□□□□ 0.37
BRAT1-202ENST00000421712 TNMDQ9H2S6 317 aa17.34■□□□□ 0.37
BRAT1-202ENST00000421712 ARHGAP28Q9P2N2 729 aa17.34■□□□□ 0.37
BRAT1-202ENST00000421712 SERTAD1Q9UHV2 236 aa17.34■□□□□ 0.37
BRAT1-202ENST00000421712 MTUS1Q9ULD2 1270 aa17.34■□□□□ 0.37
BRAT1-202ENST00000421712 A0A1B0GUA9 196 aa17.33■□□□□ 0.36
BRAT1-202ENST00000421712 A0A1W2PQ27 194 aa17.33■□□□□ 0.36
BRAT1-202ENST00000421712 A0A1W2PQ64 194 aa17.33■□□□□ 0.36
BRAT1-202ENST00000421712 A0A1W2PQD8 194 aa17.33■□□□□ 0.36
BRAT1-202ENST00000421712 N4BP3O15049 544 aa17.33■□□□□ 0.36
BRAT1-202ENST00000421712 NPTXRO95502 500 aa17.33■□□□□ 0.36
BRAT1-202ENST00000421712 AFMP43652 599 aa17.33■□□□□ 0.36
BRAT1-202ENST00000421712 TAP1Q03518 808 aa17.33■□□□□ 0.36
BRAT1-202ENST00000421712 HERC4Q5GLZ8 1057 aaPredicted RBP17.33■□□□□ 0.36
BRAT1-202ENST00000421712 SLC27A1Q6PCB7 646 aa17.33■□□□□ 0.36
BRAT1-202ENST00000421712 HAUS6Q7Z4H7 955 aa17.33■□□□□ 0.36
BRAT1-202ENST00000421712 CCDC65Q8IXS2 484 aa17.33■□□□□ 0.36
BRAT1-202ENST00000421712 CMTR2Q8IYT2 770 aaKnown RBP17.33■□□□□ 0.36
BRAT1-202ENST00000421712 HACE1Q8IYU2 909 aa17.33■□□□□ 0.36
BRAT1-202ENST00000421712 CRIPAKQ8N1N5 446 aa17.33■□□□□ 0.36
BRAT1-202ENST00000421712 TMEM161BQ8NDZ6 487 aa17.33■□□□□ 0.36
BRAT1-202ENST00000421712 ARNTL2Q8WYA1 636 aa17.33■□□□□ 0.36
BRAT1-202ENST00000421712 LPPQ93052 612 aa17.33■□□□□ 0.36
BRAT1-202ENST00000421712 APOL6Q9BWW8 343 aa17.33■□□□□ 0.36
BRAT1-202ENST00000421712 EIF2AQ9BY44 585 aaKnown RBP17.33■□□□□ 0.36
BRAT1-202ENST00000421712 MRPL4Q9BYD3 311 aaKnown RBP17.33■□□□□ 0.36
BRAT1-202ENST00000421712 TTYH1Q9H313 450 aaPredicted RBP17.33■□□□□ 0.36
BRAT1-202ENST00000421712 MAGEF1Q9HAY2 307 aa17.33■□□□□ 0.36
BRAT1-202ENST00000421712 PANK4Q9NVE7 773 aa17.33■□□□□ 0.36
BRAT1-202ENST00000421712 KBTBD4Q9NVX7 518 aa17.33■□□□□ 0.36
BRAT1-202ENST00000421712 MYO9BQ13459 2157 aa17.32■□□□□ 0.36
BRAT1-202ENST00000421712 CNTNAP2Q9UHC6 1331 aa17.32■□□□□ 0.36
BRAT1-202ENST00000421712 LINC01553A4QN01 128 aa17.32■□□□□ 0.36
BRAT1-202ENST00000421712 TTLL13PA6NNM8 815 aa17.32■□□□□ 0.36
BRAT1-202ENST00000421712 ZNF623O75123 536 aa17.32■□□□□ 0.36
BRAT1-202ENST00000421712 ARHGEF15O94989 841 aa17.32■□□□□ 0.36
BRAT1-202ENST00000421712 SLFN14P0C7P3 912 aa17.32■□□□□ 0.36
BRAT1-202ENST00000421712 ITGA4P13612 1032 aa17.32■□□□□ 0.36
BRAT1-202ENST00000421712 GAP43P17677 238 aa17.32■□□□□ 0.36
BRAT1-202ENST00000421712 NDUFA8P51970 172 aa17.32■□□□□ 0.36
BRAT1-202ENST00000421712 ZNF131P52739 623 aa17.32■□□□□ 0.36
BRAT1-202ENST00000421712 ASIC1P78348 528 aa17.32■□□□□ 0.36
BRAT1-202ENST00000421712 UBXN11Q5T124 520 aa17.32■□□□□ 0.36
BRAT1-202ENST00000421712 ATF7IP2Q5U623 682 aa17.32■□□□□ 0.36
BRAT1-202ENST00000421712 APBB1IPQ7Z5R6 666 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms