RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 ENOX1Q8TC92 643 aaKnown RBP11.51□□□□□ -0.57
PTCH1-206ENST00000421141 ADORA2AP29274 412 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 CASP14P31944 242 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 ATN1P54259 1190 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-206ENST00000421141 ACTR2P61160 394 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 NGRNQ9NPE2 291 aaKnown RBP11.51□□□□□ -0.57
PTCH1-206ENST00000421141 LSM7Q9UK45 103 aaKnown RBP11.51□□□□□ -0.57
PTCH1-206ENST00000421141 MRC1P22897 1456 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 PMLP29590 882 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 TSTA3Q13630 321 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-206ENST00000421141 ATF7IP2Q5U623 682 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 CFAP57Q96MR6 1250 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 DDX23Q9BUQ8 820 aaKnown RBP11.5□□□□□ -0.57
PTCH1-206ENST00000421141 ANKEF1Q9NU02 776 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 PQBP1O60828 265 aaKnown RBP11.5□□□□□ -0.57
PTCH1-206ENST00000421141 FKTNO75072 461 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 CDC25BP30305 580 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 TXNRD3Q86VQ6 643 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 TSC1Q92574 1164 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 TTC25Q96NG3 672 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 SYT17Q9BSW7 474 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 SCYL1Q96KG9 808 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 PXMP2Q9NR77 195 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 PTPN22Q9Y2R2 807 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 DSG3P32926 999 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 PTPROQ16827 1216 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 TMEM39AQ9NV64 488 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 ARHGAP15Q53QZ3 475 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 VPS41P49754 854 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 SP3Q02447 781 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 CCDC6Q16204 474 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 BTBD8Q5XKL5 378 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 RNF208Q9H0X6 261 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 VTA1Q9NP79 307 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 TUBE1Q9UJT0 475 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 CNTNAP5Q8WYK1 1306 aa11.5□□□□□ -0.57
PTCH1-206ENST00000421141 M0QYV0 167 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 GUCY1A2P33402 732 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 KCNH2Q12809 1159 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 RPUSD2Q8IZ73 545 aaKnown RBP11.49□□□□□ -0.57
PTCH1-206ENST00000421141 MRIQ9BWK5 157 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 ADAM22Q9P0K1 906 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 TJP3O95049 919 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 AKR1A1P14550 325 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 PAMP19021 973 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 PCSK1P29120 753 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 NLRP11P59045 1033 aaKnown RBP11.49□□□□□ -0.57
PTCH1-206ENST00000421141 SNRPFP62306 86 aaKnown RBP11.49□□□□□ -0.57
PTCH1-206ENST00000421141 PCNX4Q63HM2 1172 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 STOX1Q6ZVD7 989 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 ADAT2Q7Z6V5 191 aaKnown RBP11.49□□□□□ -0.57
PTCH1-206ENST00000421141 MRFAP1L1Q96HT8 127 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 COLEC11Q9BWP8 271 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 ABHD16BQ9H3Z7 469 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 DDTLA6NHG4 134 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-206ENST00000421141 GSTA1P08263 222 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 GSTA2P09210 222 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 DYNLT1P63172 113 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 HHATQ5VTY9 493 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 RGMBQ6NW40 437 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 RAPH1Q70E73 1250 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 PASD1Q8IV76 773 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 C17orf75Q9HAS0 396 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 PCDHB12Q9Y5F1 795 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 TM4SF1P30408 202 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 ACCSLQ4AC99 568 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 C3orf67Q6ZVT6 689 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 PLCH1Q4KWH8 1693 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 CD2BP2O95400 341 aaKnown RBP11.49□□□□□ -0.57
PTCH1-206ENST00000421141 LRG1P02750 347 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 EHHADHQ08426 723 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 RPS6KA2Q15349 733 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 LRRC8AQ8IWT6 810 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 FAM76AQ8TAV0 307 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 TAAR1Q96RJ0 339 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 DDX41Q9UJV9 622 aaKnown RBP11.49□□□□□ -0.57
PTCH1-206ENST00000421141 CPP00450 1065 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 SAT1P21673 171 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 RBL2Q08999 1139 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 RHOT2Q8IXI1 618 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 GDAP1Q8TB36 358 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 FSD1LQ9BXM9 530 aa11.49□□□□□ -0.57
PTCH1-206ENST00000421141 H7C4K7 107 aa11.48□□□□□ -0.57
PTCH1-206ENST00000421141 ADORA2BP29275 332 aa11.48□□□□□ -0.57
PTCH1-206ENST00000421141 SEPT8Q92599 483 aa11.48□□□□□ -0.57
PTCH1-206ENST00000421141 DESI2Q9BSY9 194 aa11.48□□□□□ -0.57
PTCH1-206ENST00000421141 IDI2Q9BXS1 227 aa11.48□□□□□ -0.57
PTCH1-206ENST00000421141 XPNPEP3Q9NQH7 507 aa11.48□□□□□ -0.57
PTCH1-206ENST00000421141 PCDHB8Q9UN66 801 aa11.48□□□□□ -0.57
PTCH1-206ENST00000421141 PRCPP42785 496 aa11.48□□□□□ -0.57
PTCH1-206ENST00000421141 ZBED6P86452 979 aa11.48□□□□□ -0.57
PTCH1-206ENST00000421141 FRMD5Q7Z6J6 570 aa11.48□□□□□ -0.57
PTCH1-206ENST00000421141 NOP9Q86U38 636 aaKnown RBP11.48□□□□□ -0.57
PTCH1-206ENST00000421141 CCSER1Q9C0I3 900 aa11.48□□□□□ -0.57
PTCH1-206ENST00000421141 MROH7Q68CQ1 1323 aa11.48□□□□□ -0.57
PTCH1-206ENST00000421141 SART1O43290 800 aaKnown RBP11.48□□□□□ -0.57
PTCH1-206ENST00000421141 THOC5Q13769 683 aaKnown RBP11.48□□□□□ -0.57
PTCH1-206ENST00000421141 PLA2G4FQ68DD2 849 aa11.48□□□□□ -0.57
PTCH1-206ENST00000421141 NHEJ1Q9H9Q4 299 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-206ENST00000421141 DPP7Q9UHL4 492 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms