RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 SNX2O60749 519 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 CALB1P05937 261 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 HLA-DPA1P20036 260 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 XXYLT1Q8NBI6 393 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.11□□□□□ -0.31
CLCN4-203ENST00000421085 PPP1R36Q96LQ0 422 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 TSSK1BQ9BXA7 367 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 SENP1Q9P0U3 644 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 CSADQ9Y600 493 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 MRPS35P82673 323 aaKnown RBP13.11□□□□□ -0.31
CLCN4-203ENST00000421085 ANKRD40Q6AI12 368 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 FRA10AC1Q70Z53 315 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 METTL23Q86XA0 190 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 PARD3BQ8TEW8 1205 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 GCOM2Q9BZD3 368 aaPredicted RBP13.11□□□□□ -0.31
CLCN4-203ENST00000421085 NOD2Q9HC29 1040 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 HACD3Q9P035 362 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 IP6K2Q9UHH9 426 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 XDHP47989 1333 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 DEAF1O75398 565 aaPredicted RBP13.11□□□□□ -0.31
CLCN4-203ENST00000421085 TMED10P49755 219 aaKnown RBP13.11□□□□□ -0.31
CLCN4-203ENST00000421085 RHOT1Q8IXI2 618 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 MB21D2Q8IYB1 491 aaPredicted RBP13.11□□□□□ -0.31
CLCN4-203ENST00000421085 LCMT1Q9UIC8 334 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 CLASP1Q7Z460 1538 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 FAM107AO95990 144 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 PSAPP07602 524 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 XPAP23025 273 aaPredicted RBP13.1□□□□□ -0.31
CLCN4-203ENST00000421085 SERPINB10P48595 397 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 CDK8P49336 464 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 SKOR1P84550 965 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 KCNA1Q09470 495 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 PTGISQ16647 500 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 SRGAP2CP0DJJ0 459 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 HADHAP40939 763 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 PRAMEP78395 509 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 ROR1Q01973 937 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 CYLC2Q14093 348 aaPredicted RBP13.1□□□□□ -0.31
CLCN4-203ENST00000421085 DNAL1Q4LDG9 190 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 ZC3H12BQ5HYM0 836 aaKnown RBP13.1□□□□□ -0.31
CLCN4-203ENST00000421085 DAB2IPQ5VWQ8 1189 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 SLFN12LQ6IEE8 588 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 RHPN2Q8IUC4 686 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 PPP1R16BQ96T49 567 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 SMG5Q9UPR3 1016 aaKnown RBP13.1□□□□□ -0.31
CLCN4-203ENST00000421085 LEMD3Q9Y2U8 911 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 TYK2P29597 1187 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 VAMP7P51809 220 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 HIF1AQ16665 826 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 LRRC31Q6UY01 552 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 RAD9BQ6WBX8 426 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 TTC8Q8TAM2 541 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 PKD2L2Q9NZM6 624 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 POTEB3A0JP26 581 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 TYW5A2RUC4 315 aaKnown RBP13.1□□□□□ -0.31
CLCN4-203ENST00000421085 POTECB2RU33 542 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 KRT8P05787 483 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 MARK3P27448 753 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 FXR1P51114 621 aaKnown RBP eCLIP13.1□□□□□ -0.31
CLCN4-203ENST00000421085 FAM98CQ17RN3 349 aaKnown RBP13.1□□□□□ -0.31
CLCN4-203ENST00000421085 POTEBQ6S5H4 581 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 BTNL9Q6UXG8 535 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 DGKHQ86XP1 1220 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 THTPAQ9BU02 230 aa13.1□□□□□ -0.31
CLCN4-203ENST00000421085 UBE4BO95155 1302 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 IGSF1Q8N6C5 1336 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 H0Y626 953 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 TRIM16O95361 564 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 NR1I3Q14994 352 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 CYB5D1Q6P9G0 228 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 ADCK1Q86TW2 530 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 TC2NQ8N9U0 490 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 NOA1Q8NC60 698 aaKnown RBP13.09□□□□□ -0.31
CLCN4-203ENST00000421085 RANBP17Q9H2T7 1088 aaKnown RBP13.09□□□□□ -0.31
CLCN4-203ENST00000421085 WDR19Q8NEZ3 1342 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 SULF1Q8IWU6 871 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 GUF1Q8N442 669 aaKnown RBP13.09□□□□□ -0.31
CLCN4-203ENST00000421085 SNX19Q92543 992 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 FSD1LQ9BXM9 530 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 ALDH8A1Q9H2A2 487 aaPredicted RBP13.09□□□□□ -0.31
CLCN4-203ENST00000421085 RHBDL2Q9NX52 303 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 PFASO15067 1338 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 PLA2G4AP47712 749 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 ZNF667Q5HYK9 610 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 OR9Q1Q8NGQ5 310 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 PBXIP1Q96AQ6 731 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 PIK3R2O00459 728 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 LDHAP00338 332 aaKnown RBP13.09□□□□□ -0.31
CLCN4-203ENST00000421085 NAALADL2Q58DX5 795 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 ARMCX2Q7L311 632 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 C4orf33Q8N1A6 199 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 SLC9A2Q9UBY0 812 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 ASAP2O43150 1006 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 RAD51CO43502 376 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 CARSP49589 748 aaKnown RBP13.09□□□□□ -0.31
CLCN4-203ENST00000421085 MAPRE2Q15555 327 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 ATL2Q8NHH9 583 aa13.09□□□□□ -0.31
CLCN4-203ENST00000421085 ITIH6Q6UXX5 1313 aa13.08□□□□□ -0.31
CLCN4-203ENST00000421085 CLRN2A0PK11 232 aa13.08□□□□□ -0.31
CLCN4-203ENST00000421085 MYBL1P10243 752 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms