RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 DDHD2O94830 711 aa18.87■□□□□ 0.61
UPF3AP3-201ENST00000420996 P4HBP07237 508 aaKnown RBP18.87■□□□□ 0.61
UPF3AP3-201ENST00000420996 KLRC2P26717 231 aa18.87■□□□□ 0.61
UPF3AP3-201ENST00000420996 CLCN4P51793 760 aa18.87■□□□□ 0.61
UPF3AP3-201ENST00000420996 INF2Q27J81 1249 aa18.87■□□□□ 0.61
UPF3AP3-201ENST00000420996 C2orf16Q68DN1 1984 aa18.87■□□□□ 0.61
UPF3AP3-201ENST00000420996 OTOP3Q7RTS5 596 aa18.87■□□□□ 0.61
UPF3AP3-201ENST00000420996 SRGAP1Q7Z6B7 1085 aa18.87■□□□□ 0.61
UPF3AP3-201ENST00000420996 FEZF2Q8TBJ5 459 aa18.87■□□□□ 0.61
UPF3AP3-201ENST00000420996 PRPF31Q8WWY3 499 aaKnown RBP18.87■□□□□ 0.61
UPF3AP3-201ENST00000420996 PSPC1Q8WXF1 523 aaKnown RBP18.87■□□□□ 0.61
UPF3AP3-201ENST00000420996 CEP170P1Q96L14 293 aa18.87■□□□□ 0.61
UPF3AP3-201ENST00000420996 FAM193BQ96PV7 902 aaPredicted RBP18.87■□□□□ 0.61
UPF3AP3-201ENST00000420996 TMEM175Q9BSA9 504 aa18.87■□□□□ 0.61
UPF3AP3-201ENST00000420996 MFSD1Q9H3U5 465 aa18.87■□□□□ 0.61
UPF3AP3-201ENST00000420996 DHX33Q9H6R0 707 aaKnown RBP18.87■□□□□ 0.61
UPF3AP3-201ENST00000420996 RSAD1Q9HA92 442 aa18.87■□□□□ 0.61
UPF3AP3-201ENST00000420996 ZSWIM6Q9HCJ5 1215 aa18.87■□□□□ 0.61
UPF3AP3-201ENST00000420996 CNTNAP2Q9UHC6 1331 aa18.87■□□□□ 0.61
UPF3AP3-201ENST00000420996 FAN1Q9Y2M0 1017 aa18.87■□□□□ 0.61
UPF3AP3-201ENST00000420996 SPDYE4A6NLX3 237 aa18.86■□□□□ 0.61
UPF3AP3-201ENST00000420996 CNPP09543 421 aaKnown RBP18.86■□□□□ 0.61
UPF3AP3-201ENST00000420996 SRGAP2CP0DJJ0 459 aa18.86■□□□□ 0.61
UPF3AP3-201ENST00000420996 HOXA11P31270 313 aaPredicted RBP18.86■□□□□ 0.61
UPF3AP3-201ENST00000420996 RFC5P40937 340 aa18.86■□□□□ 0.61
UPF3AP3-201ENST00000420996 NBL1P41271 181 aa18.86■□□□□ 0.61
UPF3AP3-201ENST00000420996 LETM2Q2VYF4 491 aa18.86■□□□□ 0.61
UPF3AP3-201ENST00000420996 CPLX2Q6PUV4 134 aaKnown RBP18.86■□□□□ 0.61
UPF3AP3-201ENST00000420996 CCDC149Q6ZUS6 474 aa18.86■□□□□ 0.61
UPF3AP3-201ENST00000420996 ZNF579Q8NAF0 562 aaKnown RBP18.86■□□□□ 0.61
UPF3AP3-201ENST00000420996 SNX27Q96L92 541 aa18.86■□□□□ 0.61
UPF3AP3-201ENST00000420996 AIFM3Q96NN9 605 aa18.86■□□□□ 0.61
UPF3AP3-201ENST00000420996 MINDY3Q9H8M7 445 aa18.86■□□□□ 0.61
UPF3AP3-201ENST00000420996 KCNMB3Q9NPA1 279 aa18.86■□□□□ 0.61
UPF3AP3-201ENST00000420996 MRPL17Q9NRX2 175 aaKnown RBP18.86■□□□□ 0.61
UPF3AP3-201ENST00000420996 VAV3Q9UKW4 847 aa18.86■□□□□ 0.61
UPF3AP3-201ENST00000420996 CYP46A1Q9Y6A2 500 aa18.86■□□□□ 0.61
UPF3AP3-201ENST00000420996 NRP1O14786 923 aa18.85■□□□□ 0.61
UPF3AP3-201ENST00000420996 SSBP05455 408 aaKnown RBP eCLIP18.85■□□□□ 0.61
UPF3AP3-201ENST00000420996 AFF1P51825 1210 aaKnown RBP18.85■□□□□ 0.61
UPF3AP3-201ENST00000420996 LAMTOR4Q0VGL1 99 aa18.85■□□□□ 0.61
UPF3AP3-201ENST00000420996 TDGQ13569 410 aa18.85■□□□□ 0.61
UPF3AP3-201ENST00000420996 UBXN11Q5T124 520 aa18.85■□□□□ 0.61
UPF3AP3-201ENST00000420996 PPP4R3AQ6IN85 833 aa18.85■□□□□ 0.61
UPF3AP3-201ENST00000420996 C15orf39Q6ZRI6 1047 aa18.85■□□□□ 0.61
UPF3AP3-201ENST00000420996 TMEM143Q96AN5 459 aa18.85■□□□□ 0.61
UPF3AP3-201ENST00000420996 SLKQ9H2G2 1235 aaPredicted RBP18.85■□□□□ 0.61
UPF3AP3-201ENST00000420996 WRAP73Q9P2S5 460 aaPredicted RBP18.85■□□□□ 0.61
UPF3AP3-201ENST00000420996 ZFHX2Q9C0A1 2572 aaPredicted RBP18.84■□□□□ 0.61
UPF3AP3-201ENST00000420996 ASAP2O43150 1006 aa18.84■□□□□ 0.61
UPF3AP3-201ENST00000420996 EPB41L2O43491 1005 aaKnown RBP18.84■□□□□ 0.61
UPF3AP3-201ENST00000420996 GAS2O43903 313 aaKnown RBP18.84■□□□□ 0.61
UPF3AP3-201ENST00000420996 GCFC2P16383 781 aaKnown RBP18.84■□□□□ 0.61
UPF3AP3-201ENST00000420996 NCLP19338 710 aaKnown RBP18.84■□□□□ 0.61
UPF3AP3-201ENST00000420996 ASCL5Q7RTU5 278 aa18.84■□□□□ 0.61
UPF3AP3-201ENST00000420996 C4orf19Q8IY42 314 aa18.84■□□□□ 0.61
UPF3AP3-201ENST00000420996 CNNM3Q8NE01 707 aa18.84■□□□□ 0.61
UPF3AP3-201ENST00000420996 TCP11Q8WWU5 503 aa18.84■□□□□ 0.61
UPF3AP3-201ENST00000420996 UBN1Q9NPG3 1134 aa18.84■□□□□ 0.61
UPF3AP3-201ENST00000420996 SSX2IPQ9Y2D8 614 aa18.84■□□□□ 0.61
UPF3AP3-201ENST00000420996 CCDC194A0A1B0GVG4 234 aa18.83■□□□□ 0.6
UPF3AP3-201ENST00000420996 POMCP01189 267 aa18.83■□□□□ 0.6
UPF3AP3-201ENST00000420996 SOD2P04179 222 aa18.83■□□□□ 0.6
UPF3AP3-201ENST00000420996 EPHA7Q15375 998 aa18.83■□□□□ 0.6
UPF3AP3-201ENST00000420996 OTUD6AQ7L8S5 288 aa18.83■□□□□ 0.6
UPF3AP3-201ENST00000420996 NEK8Q86SG6 692 aa18.83■□□□□ 0.6
UPF3AP3-201ENST00000420996 CMASQ8NFW8 434 aaPredicted RBP18.83■□□□□ 0.6
UPF3AP3-201ENST00000420996 LARP6Q9BRS8 491 aaKnown RBP18.83■□□□□ 0.6
UPF3AP3-201ENST00000420996 PHF20Q9BVI0 1012 aa18.83■□□□□ 0.6
UPF3AP3-201ENST00000420996 KCNK12Q9HB15 430 aa18.83■□□□□ 0.6
UPF3AP3-201ENST00000420996 DUSP12Q9UNI6 340 aa18.83■□□□□ 0.6
UPF3AP3-201ENST00000420996 KCNJ14Q9UNX9 436 aa18.83■□□□□ 0.6
UPF3AP3-201ENST00000420996 ARID2Q68CP9 1835 aa18.83■□□□□ 0.6
UPF3AP3-201ENST00000420996 PRR23AA6NEV1 266 aa18.82■□□□□ 0.6
UPF3AP3-201ENST00000420996 TBX3O15119 743 aa18.82■□□□□ 0.6
UPF3AP3-201ENST00000420996 URODP06132 367 aa18.82■□□□□ 0.6
UPF3AP3-201ENST00000420996 ITGA4P13612 1032 aa18.82■□□□□ 0.6
UPF3AP3-201ENST00000420996 YWHABP31946 246 aaKnown RBP18.82■□□□□ 0.6
UPF3AP3-201ENST00000420996 STK3Q13188 491 aa18.82■□□□□ 0.6
UPF3AP3-201ENST00000420996 PCBP1Q15365 356 aaKnown RBP eCLIP18.82■□□□□ 0.6
UPF3AP3-201ENST00000420996 CWF19L1Q69YN2 538 aaKnown RBP18.82■□□□□ 0.6
UPF3AP3-201ENST00000420996 CYP26C1Q6V0L0 522 aa18.82■□□□□ 0.6
UPF3AP3-201ENST00000420996 FERMT3Q86UX7 667 aa18.82■□□□□ 0.6
UPF3AP3-201ENST00000420996 RNF149Q8NC42 400 aa18.82■□□□□ 0.6
UPF3AP3-201ENST00000420996 SMG8Q8ND04 991 aaKnown RBP18.82■□□□□ 0.6
UPF3AP3-201ENST00000420996 FLCNQ8NFG4 579 aa18.82■□□□□ 0.6
UPF3AP3-201ENST00000420996 HAS1Q92839 578 aa18.82■□□□□ 0.6
UPF3AP3-201ENST00000420996 RPS6KC1Q96S38 1066 aa18.82■□□□□ 0.6
UPF3AP3-201ENST00000420996 LXNQ9BS40 222 aa18.82■□□□□ 0.6
UPF3AP3-201ENST00000420996 HERC2P3Q9BVR0 1158 aa18.82■□□□□ 0.6
UPF3AP3-201ENST00000420996 TM6SF1Q9BZW5 370 aa18.82■□□□□ 0.6
UPF3AP3-201ENST00000420996 IGSF9Q9P2J2 1179 aa18.82■□□□□ 0.6
UPF3AP3-201ENST00000420996 DPP7Q9UHL4 492 aa18.82■□□□□ 0.6
UPF3AP3-201ENST00000420996 TDRD15B5MCY1 1934 aaKnown RBP18.82■□□□□ 0.6
UPF3AP3-201ENST00000420996 C2CD2LO14523 706 aa18.81■□□□□ 0.6
UPF3AP3-201ENST00000420996 INPPL1O15357 1258 aa18.81■□□□□ 0.6
UPF3AP3-201ENST00000420996 ERLIN2O94905 339 aa18.81■□□□□ 0.6
UPF3AP3-201ENST00000420996 ADH1AP07327 375 aa18.81■□□□□ 0.6
UPF3AP3-201ENST00000420996 AOC1P19801 751 aa18.81■□□□□ 0.6
UPF3AP3-201ENST00000420996 AXLP30530 894 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms