RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 DLL1O00548 723 aa22.83■■□□□ 1.25
PKNOX1-202ENST00000418336 FSCN2O14926 492 aa22.83■■□□□ 1.25
PKNOX1-202ENST00000418336 FGF18O76093 207 aa22.83■■□□□ 1.25
PKNOX1-202ENST00000418336 LAG3P18627 525 aa22.83■■□□□ 1.25
PKNOX1-202ENST00000418336 SLC12A3P55017 1021 aa22.83■■□□□ 1.25
PKNOX1-202ENST00000418336 PLCB3Q01970 1234 aa22.83■■□□□ 1.25
PKNOX1-202ENST00000418336 HLA-CQ95604 372 aa22.83■■□□□ 1.25
PKNOX1-202ENST00000418336 CCDC51Q96ER9 411 aa22.83■■□□□ 1.25
PKNOX1-202ENST00000418336 AK8Q96MA6 479 aa22.83■■□□□ 1.25
PKNOX1-202ENST00000418336 KIFC3Q9BVG8 833 aa22.83■■□□□ 1.25
PKNOX1-202ENST00000418336 CSRNP2Q9H175 543 aa22.83■■□□□ 1.25
PKNOX1-202ENST00000418336 TBC1D13Q9NVG8 400 aa22.83■■□□□ 1.25
PKNOX1-202ENST00000418336 IPPQ9Y573 584 aa22.83■■□□□ 1.25
PKNOX1-202ENST00000418336 MORC2Q9Y6X9 1032 aaPredicted RBP22.83■■□□□ 1.25
PKNOX1-202ENST00000418336 LRRIQ4A6NIV6 560 aa22.82■■□□□ 1.24
PKNOX1-202ENST00000418336 STX6O43752 255 aa22.82■■□□□ 1.24
PKNOX1-202ENST00000418336 ERLIN2O94905 339 aa22.82■■□□□ 1.24
PKNOX1-202ENST00000418336 BMP1P13497 986 aa22.82■■□□□ 1.24
PKNOX1-202ENST00000418336 ERVFC1P60507 584 aa22.82■■□□□ 1.24
PKNOX1-202ENST00000418336 MRPS5P82675 430 aaKnown RBP22.82■■□□□ 1.24
PKNOX1-202ENST00000418336 HYAL1Q12794 435 aa22.82■■□□□ 1.24
PKNOX1-202ENST00000418336 CTC1Q2NKJ3 1217 aa22.82■■□□□ 1.24
PKNOX1-202ENST00000418336 TJAP1Q5JTD0 557 aa22.82■■□□□ 1.24
PKNOX1-202ENST00000418336 NOTUMQ6P988 496 aa22.82■■□□□ 1.24
PKNOX1-202ENST00000418336 KCNT2Q6UVM3 1135 aa22.82■■□□□ 1.24
PKNOX1-202ENST00000418336 KCTD17Q8N5Z5 321 aa22.82■■□□□ 1.24
PKNOX1-202ENST00000418336 RSPH1Q8WYR4 309 aa22.82■■□□□ 1.24
PKNOX1-202ENST00000418336 BLOC1S4Q9NUP1 217 aa22.82■■□□□ 1.24
PKNOX1-202ENST00000418336 FBXO2Q9UK22 296 aaPredicted RBP22.82■■□□□ 1.24
PKNOX1-202ENST00000418336 USP20Q9Y2K6 914 aa22.82■■□□□ 1.24
PKNOX1-202ENST00000418336 HES2Q9Y543 173 aa22.82■■□□□ 1.24
PKNOX1-202ENST00000418336 CNTNAP2Q9UHC6 1331 aa22.82■■□□□ 1.24
PKNOX1-202ENST00000418336 BMP15O95972 392 aa22.81■■□□□ 1.24
PKNOX1-202ENST00000418336 GUCY2CP25092 1073 aa22.81■■□□□ 1.24
PKNOX1-202ENST00000418336 GTF2F1P35269 517 aaKnown RBP eCLIP22.81■■□□□ 1.244e-7■■■■■ 27
PKNOX1-202ENST00000418336 LTBRP36941 435 aa22.81■■□□□ 1.24
PKNOX1-202ENST00000418336 KCNQ1P51787 676 aa22.81■■□□□ 1.24
PKNOX1-202ENST00000418336 UBE3AQ05086 875 aa22.81■■□□□ 1.24
PKNOX1-202ENST00000418336 ARSHQ5FYA8 562 aa22.81■■□□□ 1.24
PKNOX1-202ENST00000418336 NOMO2Q5JPE7 1267 aa22.81■■□□□ 1.24
PKNOX1-202ENST00000418336 USP49Q70CQ1 688 aa22.81■■□□□ 1.24
PKNOX1-202ENST00000418336 TAS1R3Q7RTX0 852 aa22.81■■□□□ 1.24
PKNOX1-202ENST00000418336 ADGRD2Q7Z7M1 963 aa22.81■■□□□ 1.24
PKNOX1-202ENST00000418336 TMEM173Q86WV6 379 aaPredicted RBP22.81■■□□□ 1.24
PKNOX1-202ENST00000418336 CDR2LQ86X02 465 aaPredicted RBP22.81■■□□□ 1.24
PKNOX1-202ENST00000418336 SLC39A11Q8N1S5 342 aa22.81■■□□□ 1.24
PKNOX1-202ENST00000418336 SYT2Q8N9I0 419 aaPredicted RBP22.81■■□□□ 1.24
PKNOX1-202ENST00000418336 BCL7CQ8WUZ0 217 aaPredicted RBP22.81■■□□□ 1.24
PKNOX1-202ENST00000418336 KIFAP3Q92845 792 aa22.81■■□□□ 1.24
PKNOX1-202ENST00000418336 PRIMPOLQ96LW4 560 aa22.81■■□□□ 1.24
PKNOX1-202ENST00000418336 NRDE2Q9H7Z3 1164 aa22.81■■□□□ 1.24
PKNOX1-202ENST00000418336 UBE2ZQ9H832 354 aaPredicted RBP22.81■■□□□ 1.24
PKNOX1-202ENST00000418336 PRMT7Q9NVM4 692 aaPredicted RBP22.81■■□□□ 1.24
PKNOX1-202ENST00000418336 PCDHB12Q9Y5F1 795 aa22.81■■□□□ 1.24
PKNOX1-202ENST00000418336 SLC26A4O43511 780 aa22.8■■□□□ 1.24
PKNOX1-202ENST00000418336 HIP1RO75146 1068 aa22.8■■□□□ 1.24
PKNOX1-202ENST00000418336 LONP1P36776 959 aaKnown RBP22.8■■□□□ 1.24
PKNOX1-202ENST00000418336 SKIV2LQ15477 1246 aaKnown RBP22.8■■□□□ 1.24
PKNOX1-202ENST00000418336 CABP7Q86V35 215 aa22.8■■□□□ 1.24
PKNOX1-202ENST00000418336 ZNF280BQ86YH2 543 aa22.8■■□□□ 1.24
PKNOX1-202ENST00000418336 ABI1Q8IZP0 508 aa22.8■■□□□ 1.24
PKNOX1-202ENST00000418336 GSTCDQ8NEC7 633 aa22.8■■□□□ 1.24
PKNOX1-202ENST00000418336 USP28Q96RU2 1077 aa22.8■■□□□ 1.24
PKNOX1-202ENST00000418336 PLIN2Q99541 437 aa22.8■■□□□ 1.24
PKNOX1-202ENST00000418336 MRPL9Q9BYD2 267 aaKnown RBP22.8■■□□□ 1.24
PKNOX1-202ENST00000418336 NXF3Q9H4D5 531 aaKnown RBP22.8■■□□□ 1.24
PKNOX1-202ENST00000418336 PDZD7Q9H5P4 517 aa22.8■■□□□ 1.24
PKNOX1-202ENST00000418336 AAASQ9NRG9 546 aa22.8■■□□□ 1.24
PKNOX1-202ENST00000418336 LZTS1Q9Y250 596 aa22.8■■□□□ 1.24
PKNOX1-202ENST00000418336 ACKR2O00590 384 aa22.79■■□□□ 1.24
PKNOX1-202ENST00000418336 DDHD2O94830 711 aa22.79■■□□□ 1.24
PKNOX1-202ENST00000418336 BCAR1P56945 870 aa22.79■■□□□ 1.24
PKNOX1-202ENST00000418336 CSPP1Q1MSJ5 1256 aa22.79■■□□□ 1.24
PKNOX1-202ENST00000418336 SPOUT1Q5T280 376 aaKnown RBP22.79■■□□□ 1.24
PKNOX1-202ENST00000418336 GLB1LQ6UWU2 654 aa22.79■■□□□ 1.24
PKNOX1-202ENST00000418336 MRPS27Q92552 414 aaKnown RBP22.79■■□□□ 1.24
PKNOX1-202ENST00000418336 PGBD4Q96DM1 585 aa22.79■■□□□ 1.24
PKNOX1-202ENST00000418336 PABPC5Q96DU9 382 aaKnown RBP22.79■■□□□ 1.24
PKNOX1-202ENST00000418336 NT5C3AQ9H0P0 336 aa22.79■■□□□ 1.24
PKNOX1-202ENST00000418336 C2orf40Q9H1Z8 148 aa22.79■■□□□ 1.24
PKNOX1-202ENST00000418336 RSAD1Q9HA92 442 aa22.79■■□□□ 1.24
PKNOX1-202ENST00000418336 MIOSQ9NXC5 875 aa22.79■■□□□ 1.24
PKNOX1-202ENST00000418336 ARHGAP28Q9P2N2 729 aa22.79■■□□□ 1.24
PKNOX1-202ENST00000418336 DNAJB4Q9UDY4 337 aa22.79■■□□□ 1.24
PKNOX1-202ENST00000418336 PLA2G4BP0C869 781 aa22.78■■□□□ 1.24
PKNOX1-202ENST00000418336 NPTX2P47972 431 aa22.78■■□□□ 1.24
PKNOX1-202ENST00000418336 NT5DC1Q5TFE4 455 aa22.78■■□□□ 1.24
PKNOX1-202ENST00000418336 EEF1DP3Q658K8 133 aa22.78■■□□□ 1.24
PKNOX1-202ENST00000418336 SLC27A1Q6PCB7 646 aa22.78■■□□□ 1.24
PKNOX1-202ENST00000418336 THNSL1Q8IYQ7 743 aa22.78■■□□□ 1.24
PKNOX1-202ENST00000418336 CNNM3Q8NE01 707 aa22.78■■□□□ 1.24
PKNOX1-202ENST00000418336 ZNF558Q96NG5 402 aa22.78■■□□□ 1.24
PKNOX1-202ENST00000418336 VN1R3Q9BXE9 311 aa22.78■■□□□ 1.24
PKNOX1-202ENST00000418336 SRPRBQ9Y5M8 271 aaKnown RBP22.78■■□□□ 1.24
PKNOX1-202ENST00000418336 LINC01565O15544 149 aa22.77■■□□□ 1.24
PKNOX1-202ENST00000418336 CSPG5O95196 566 aa22.77■■□□□ 1.24
PKNOX1-202ENST00000418336 EFEMP2O95967 443 aa22.77■■□□□ 1.24
PKNOX1-202ENST00000418336 PRKCBP05771 671 aa22.77■■□□□ 1.24
PKNOX1-202ENST00000418336 GALTP07902 379 aa22.77■■□□□ 1.24
PKNOX1-202ENST00000418336 KARSQ15046 597 aaKnown RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms