RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 HOXB4P17483 251 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 GABPB1Q06547 395 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 SUZ12Q15022 739 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 ZKSCAN8Q15776 578 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 FBXW10Q5XX13 1052 aa6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 IL31Q6EBC2 164 aa6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 LRFN4Q6PJG9 635 aa6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 LYPD4Q6UWN0 246 aa6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 LMBR1LQ6UX01 489 aa6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 DMRTC2Q8IXT2 367 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 MYOCDQ8IZQ8 938 aa6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 KLHL23Q8NBE8 558 aa6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 RBBP8NLQ8NC74 664 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 AFAP1L1Q8TED9 768 aa6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 PLPPR2Q96GM1 343 aa6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 BBC3Q96PG8 261 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 AP5M1Q9H0R1 490 aa6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 DNAJC18Q9H819 358 aa6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 ERVK-5Q9HDB9 667 aa6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 SIRPGQ9P1W8 387 aa6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 PI4KBQ9UBF8 816 aa6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 FBXL21Q9UKT6 434 aa6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 MROH7-TTC4A0A0A0MT08 1334 aa6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 ZZEF1O43149 2961 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 LOC100289279A0A1B0GTE1 492 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 C2CD4DB7Z1M9 353 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 DEAF1O75398 565 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 GH2P01242 217 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 CXCL10P02778 98 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 NTRK1P04629 796 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 ASGR2P07307 311 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 CELA2BP08218 269 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 IFIT1P09914 478 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 LIG1P18858 919 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 NRIP1P48552 1158 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 RHBDL3P58872 404 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 NLRP12P59046 1061 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 TNFAIP2Q03169 654 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 TCTN1Q2MV58 587 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 METTL24Q5JXM2 366 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 WIPI1Q5MNZ9 446 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 LSRQ86X29 649 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 C1orf210Q8IVY1 113 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 CELF2-AS1Q8N7Q2 184 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 MAGEB6Q8N7X4 407 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 CAGE1Q8TC20 777 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 GATA6Q92908 595 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 PUS3Q9BZE2 481 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 EPC1Q9H2F5 836 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 ANTXR1Q9H6X2 564 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 PRDM16Q9HAZ2 1276 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 KCNK4Q9NYG8 393 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 RWDD3Q9Y3V2 267 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 PCDHGA2Q9Y5H1 932 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 CORINQ9Y5Q5 1042 aa6.4□□□□□ -1.38
ECHDC1-206ENST00000417628 FRYQ5TBA9 3013 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 HELZ2Q9BYK8 2649 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 MYH13Q9UKX3 1938 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 FANCMQ8IYD8 2048 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 VGLL3A8MV65 326 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 MAP4K4O95819 1239 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 IMPDH2P12268 514 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 MCM5P33992 734 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 COPB2P35606 906 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 MCAMP43121 646 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 GPNMBQ14956 572 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 ZNF528Q3MIS6 628 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 FOXD4L6Q3SYB3 417 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 TNNI3KQ59H18 835 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 FAM47CQ5HY64 1035 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 FOXD4L3Q6VB84 417 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 LRRC8DQ7L1W4 858 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 CYFIP1Q7L576 1253 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 ADGRD2Q7Z7M1 963 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 JAZF1Q86VZ6 243 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 OR6P1Q8NGX9 317 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 WHAMMQ8TF30 809 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 ATRIPQ8WXE1 791 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 ZNF775Q96BV0 537 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 NEK1Q96PY6 1258 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 MYCBPQ99417 103 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 NCAPGQ9BPX3 1015 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 LSM14BQ9BX40 385 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 USP26Q9BXU7 913 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 TRIM55Q9BYV6 548 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 TNKS2Q9H2K2 1166 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 DHX36Q9H2U1 1008 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 TMA7Q9Y2S6 64 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 KIF3AQ9Y496 699 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 SIPA1L1O43166 1804 aa6.39□□□□□ -1.39
ECHDC1-206ENST00000417628 ZNF462Q96JM2 2506 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 BPTFQ12830 3046 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 GPR75-ASB3A0A0A6YYF3 556 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 FAM221BA6H8Z2 402 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 ANP32CO43423 234 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 TBC1D4O60343 1298 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 NBNO60934 754 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 LRP3O75074 770 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms