RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 RAPGEF5Q92565 580 aa15.64■□□□□ 0.09
HDAC9-208ENST00000417496 STRA6Q9BX79 667 aa15.64■□□□□ 0.09
HDAC9-208ENST00000417496 TEKT3Q9BXF9 490 aa15.64■□□□□ 0.09
HDAC9-208ENST00000417496 EPB41L4BQ9H329 900 aa15.64■□□□□ 0.09
HDAC9-208ENST00000417496 KCNH7Q9NS40 1196 aa15.64■□□□□ 0.09
HDAC9-208ENST00000417496 PNMA2Q9UL42 364 aa15.64■□□□□ 0.09
HDAC9-208ENST00000417496 TRAPPC3O43617 180 aa15.64■□□□□ 0.09
HDAC9-208ENST00000417496 FNTAP49354 379 aa15.64■□□□□ 0.09
HDAC9-208ENST00000417496 VAMP7P51809 220 aa15.64■□□□□ 0.09
HDAC9-208ENST00000417496 MTMR3Q13615 1198 aa15.64■□□□□ 0.09
HDAC9-208ENST00000417496 TTC27Q6P3X3 843 aa15.64■□□□□ 0.09
HDAC9-208ENST00000417496 STXBP4Q6ZWJ1 553 aa15.64■□□□□ 0.09
HDAC9-208ENST00000417496 POP1Q99575 1024 aaKnown RBP15.64■□□□□ 0.09
HDAC9-208ENST00000417496 PTPN22Q9Y2R2 807 aa15.64■□□□□ 0.09
HDAC9-208ENST00000417496 ATRNL1Q5VV63 1379 aa15.63■□□□□ 0.09
HDAC9-208ENST00000417496 NPM3O75607 178 aaKnown RBP15.63■□□□□ 0.09
HDAC9-208ENST00000417496 CALCAP01258 141 aa15.63■□□□□ 0.09
HDAC9-208ENST00000417496 BCRP11274 1271 aa15.63■□□□□ 0.09
HDAC9-208ENST00000417496 COMTP21964 271 aa15.63■□□□□ 0.09
HDAC9-208ENST00000417496 B3GNT9Q6UX72 402 aa15.63■□□□□ 0.09
HDAC9-208ENST00000417496 KRT27Q7Z3Y8 459 aa15.63■□□□□ 0.09
HDAC9-208ENST00000417496 SLC47A2Q86VL8 602 aa15.63■□□□□ 0.09
HDAC9-208ENST00000417496 PRELID2Q8N945 189 aa15.63■□□□□ 0.09
HDAC9-208ENST00000417496 FAM84AQ96KN4 292 aa15.63■□□□□ 0.09
HDAC9-208ENST00000417496 RANBP17Q9H2T7 1088 aaKnown RBP15.63■□□□□ 0.09
HDAC9-208ENST00000417496 ZHX2Q9Y6X8 837 aa15.63■□□□□ 0.09
HDAC9-208ENST00000417496 GOLGA6L10A0A0M3HER8 536 aa15.63■□□□□ 0.09
HDAC9-208ENST00000417496 NFIBO00712 420 aa15.63■□□□□ 0.09
HDAC9-208ENST00000417496 CYP26A1O43174 497 aa15.63■□□□□ 0.09
HDAC9-208ENST00000417496 PPFIA2O75334 1257 aa15.63■□□□□ 0.09
HDAC9-208ENST00000417496 CCDC172P0C7W6 258 aa15.63■□□□□ 0.09
HDAC9-208ENST00000417496 ZDHHC24Q6UX98 284 aa15.63■□□□□ 0.09
HDAC9-208ENST00000417496 MIER3Q7Z3K6 550 aa15.63■□□□□ 0.09
HDAC9-208ENST00000417496 PLCD3Q8N3E9 789 aa15.63■□□□□ 0.09
HDAC9-208ENST00000417496 RNF25Q96BH1 459 aaPredicted RBP15.63■□□□□ 0.09
HDAC9-208ENST00000417496 CCDC127Q96BQ5 260 aa15.63■□□□□ 0.09
HDAC9-208ENST00000417496 TXLNGYQ9BZA5 131 aa15.63■□□□□ 0.09
HDAC9-208ENST00000417496 RAB17Q9H0T7 212 aa15.63■□□□□ 0.09
HDAC9-208ENST00000417496 KIAA0391O15091 583 aaKnown RBP15.62■□□□□ 0.09
HDAC9-208ENST00000417496 PYGMP11217 842 aa15.62■□□□□ 0.09
HDAC9-208ENST00000417496 KCNJ1P48048 391 aa15.62■□□□□ 0.09
HDAC9-208ENST00000417496 MAP2K1Q02750 393 aaPredicted RBP15.62■□□□□ 0.09
HDAC9-208ENST00000417496 SPP2Q13103 211 aa15.62■□□□□ 0.09
HDAC9-208ENST00000417496 DGKZQ13574 1117 aa15.62■□□□□ 0.09
HDAC9-208ENST00000417496 SLC29A2Q14542 456 aa15.62■□□□□ 0.09
HDAC9-208ENST00000417496 MMS22LQ6ZRQ5 1243 aa15.62■□□□□ 0.09
HDAC9-208ENST00000417496 NOP9Q86U38 636 aaKnown RBP15.62■□□□□ 0.09
HDAC9-208ENST00000417496 PSMD1Q99460 953 aa15.62■□□□□ 0.09
HDAC9-208ENST00000417496 MXRA8Q9BRK3 442 aa15.62■□□□□ 0.09
HDAC9-208ENST00000417496 TMEM39BQ9GZU3 492 aa15.62■□□□□ 0.09
HDAC9-208ENST00000417496 SEMA4AQ9H3S1 761 aa15.62■□□□□ 0.09
HDAC9-208ENST00000417496 HOMER2Q9NSB8 354 aa15.62■□□□□ 0.09
HDAC9-208ENST00000417496 ZBTB12Q9Y330 459 aaPredicted RBP15.62■□□□□ 0.09
HDAC9-208ENST00000417496 MRPL11Q9Y3B7 192 aaKnown RBP15.62■□□□□ 0.09
HDAC9-208ENST00000417496 ATP8B3O60423 1300 aa15.62■□□□□ 0.09
HDAC9-208ENST00000417496 H0YIN7 160 aa15.62■□□□□ 0.09
HDAC9-208ENST00000417496 SLC16A4O15374 487 aa15.62■□□□□ 0.09
HDAC9-208ENST00000417496 ATP2C2O75185 946 aa15.62■□□□□ 0.09
HDAC9-208ENST00000417496 RAD17O75943 681 aa15.62■□□□□ 0.09
HDAC9-208ENST00000417496 SLCO1A2P46721 670 aa15.62■□□□□ 0.09
HDAC9-208ENST00000417496 RPL21P46778 160 aaKnown RBP15.62■□□□□ 0.09
HDAC9-208ENST00000417496 NSMFQ6X4W1 530 aa15.62■□□□□ 0.09
HDAC9-208ENST00000417496 CPXCR1Q8N123 301 aa15.62■□□□□ 0.09
HDAC9-208ENST00000417496 PPM1KQ8N3J5 372 aa15.62■□□□□ 0.09
HDAC9-208ENST00000417496 KIFC3Q9BVG8 833 aa15.62■□□□□ 0.09
HDAC9-208ENST00000417496 VEZTQ9HBM0 779 aa15.62■□□□□ 0.09
HDAC9-208ENST00000417496 HSPBP1Q9NZL4 362 aa15.62■□□□□ 0.09
HDAC9-208ENST00000417496 ANKRD63C9JTQ0 380 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 MMEP08473 750 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 CHRNB2P17787 502 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 PMS2P54278 862 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 GPC5P78333 572 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 IFI35P80217 286 aaPredicted RBP15.61■□□□□ 0.09
HDAC9-208ENST00000417496 AGBL2Q5U5Z8 902 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 C6orf89Q6UWU4 347 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 INTS8Q75QN2 995 aaKnown RBP15.61■□□□□ 0.09
HDAC9-208ENST00000417496 SLC9A9Q8IVB4 645 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 KCTD17Q8N5Z5 321 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 CHURC1Q8WUH1 139 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 SAAL1Q96ER3 474 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 LARSQ9P2J5 1176 aaKnown RBP15.61■□□□□ 0.09
HDAC9-208ENST00000417496 KIF13BQ9NQT8 1826 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 FGFR4P22455 802 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 PTGIRP43119 386 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 RARRES1P49788 294 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 GTF2A1P52655 376 aaPredicted RBP15.61■□□□□ 0.09
HDAC9-208ENST00000417496 PEX3P56589 373 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 FKBP1AP62942 108 aaKnown RBP15.61■□□□□ 0.09
HDAC9-208ENST00000417496 MICALCLQ6ZW33 695 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 CBWD2Q8IUF1 395 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 RHOT2Q8IXI1 618 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 SEMA4DQ92854 862 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 KREMEN1Q96MU8 473 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 TMEM117Q9H0C3 514 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 GRHL1Q9NZI5 618 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 KCND2Q9NZV8 630 aa15.61■□□□□ 0.09
HDAC9-208ENST00000417496 HERC5Q9UII4 1024 aaKnown RBP15.61■□□□□ 0.09
HDAC9-208ENST00000417496 DHX15O43143 795 aaKnown RBP15.6■□□□□ 0.09
HDAC9-208ENST00000417496 PPIP5K2O43314 1243 aa15.6■□□□□ 0.09
HDAC9-208ENST00000417496 ADRB2P07550 413 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms