RNA–Protein interactions for RNA: ENST00000417493.1

SNRNP25-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-204ENST00000417493 H0YCG3 227 aa12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 N4BP3O15049 544 aa12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 STX6O43752 255 aa12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 NCLP19338 710 aaKnown RBP12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 ABCD1P33897 745 aa12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 SMTNP53814 917 aa12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 PLCB3Q01970 1234 aa12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 MBTD1Q05BQ5 628 aa12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 DMP1Q13316 513 aaPredicted RBP12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 ZRSR1Q15695 479 aaKnown RBP12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 FAM187BQ17R55 369 aa12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 HYIQ5T013 277 aa12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 CDCA2Q69YH5 1023 aaPredicted RBP12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 SLC27A1Q6PCB7 646 aa12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 KCNT2Q6UVM3 1135 aa12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 PPP4R3CPQ6ZMV5 832 aa12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 MRPL10Q7Z7H8 261 aaKnown RBP12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 CABP7Q86V35 215 aa12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 ASAP3Q8TDY4 903 aa12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 MICAL1Q8TDZ2 1067 aa12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 POF1BQ8WVV4 589 aa12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 TMEM169Q96HH4 297 aa12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 CSRNP2Q9H175 543 aa12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 MINDY3Q9H8M7 445 aa12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 RSAD1Q9HA92 442 aa12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 TLR9Q9NR96 1032 aa12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 SPG21Q9NZD8 308 aa12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 RBM19Q9Y4C8 960 aaKnown RBP12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 ATG2AQ2TAZ0 1938 aa12.11□□□□□ -0.47
SNRNP25-204ENST00000417493 DLL1O00548 723 aa12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 GRM6O15303 877 aa12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 TSPAN1O60635 241 aa12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 FGF18O76093 207 aa12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 SSBP05455 408 aaKnown RBP eCLIP12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 ITGB1P05556 798 aa12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 LINC00271P0C7V0 271 aa12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 GATMP50440 423 aa12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 PRPF4BQ13523 1007 aaKnown RBP12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 SF3A1Q15459 793 aaKnown RBP12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 TMEM87AQ8NBN3 555 aa12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 SPPL3Q8TCT6 385 aa12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 PABPC5Q96DU9 382 aaKnown RBP12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 ZNF396Q96N95 335 aaPredicted RBP12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 CDCA3Q99618 268 aaPredicted RBP12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 CWH43Q9H720 699 aa12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 UBE2ZQ9H832 354 aaPredicted RBP12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 ALG13Q9NP73 1137 aaKnown RBP12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 NGRNQ9NPE2 291 aaKnown RBP12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 CCDC39Q9UFE4 941 aa12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 GIT1Q9Y2X7 761 aa12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 TCF20Q9UGU0 1960 aaKnown RBP12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 TTC28Q96AY4 2481 aa12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 CITO14578 2027 aa12.1□□□□□ -0.47
SNRNP25-204ENST00000417493 K7ERI5 159 aa12.09□□□□□ -0.47
SNRNP25-204ENST00000417493 ACKR2O00590 384 aa12.09□□□□□ -0.47
SNRNP25-204ENST00000417493 PRKCBP05771 671 aa12.09□□□□□ -0.47
SNRNP25-204ENST00000417493 ATF7P17544 494 aaPredicted RBP12.09□□□□□ -0.47
SNRNP25-204ENST00000417493 ARF4P18085 180 aaPredicted RBP12.09□□□□□ -0.47
SNRNP25-204ENST00000417493 GUCY2CP25092 1073 aa12.09□□□□□ -0.47
SNRNP25-204ENST00000417493 HOXA11P31270 313 aaPredicted RBP12.09□□□□□ -0.47
SNRNP25-204ENST00000417493 GIT2Q14161 759 aa12.09□□□□□ -0.47
SNRNP25-204ENST00000417493 DCAF4L1Q3SXM0 396 aa12.09□□□□□ -0.47
SNRNP25-204ENST00000417493 TCEAL5Q5H9L2 206 aa12.09□□□□□ -0.47
SNRNP25-204ENST00000417493 CLLU1OSQ5K130 101 aa12.09□□□□□ -0.47
SNRNP25-204ENST00000417493 MRPS27Q92552 414 aaKnown RBP12.09□□□□□ -0.47
SNRNP25-204ENST00000417493 RPS6KC1Q96S38 1066 aa12.09□□□□□ -0.47
SNRNP25-204ENST00000417493 TMEM175Q9BSA9 504 aa12.09□□□□□ -0.47
SNRNP25-204ENST00000417493 FZD8Q9H461 694 aa12.09□□□□□ -0.47
SNRNP25-204ENST00000417493 GPRC5CQ9NQ84 441 aa12.09□□□□□ -0.47
SNRNP25-204ENST00000417493 ENTPD7Q9NQZ7 604 aa12.09□□□□□ -0.47
SNRNP25-204ENST00000417493 LARSQ9P2J5 1176 aaKnown RBP12.09□□□□□ -0.47
SNRNP25-204ENST00000417493 INPP5FQ9Y2H2 1132 aa12.09□□□□□ -0.47
SNRNP25-204ENST00000417493 MORC2Q9Y6X9 1032 aaPredicted RBP12.09□□□□□ -0.47
SNRNP25-204ENST00000417493 A0A087WWV3 80 aa12.08□□□□□ -0.48
SNRNP25-204ENST00000417493 A0A1B0GUA9 196 aa12.08□□□□□ -0.48
SNRNP25-204ENST00000417493 CCDC169A6NNP5 214 aa12.08□□□□□ -0.48
SNRNP25-204ENST00000417493 PP2D1A8MPX8 630 aa12.08□□□□□ -0.48
SNRNP25-204ENST00000417493 E9PMD0 336 aa12.08□□□□□ -0.48
SNRNP25-204ENST00000417493 ZC3H11AO75152 810 aaKnown RBP eCLIP12.08□□□□□ -0.48
SNRNP25-204ENST00000417493 OFD1O75665 1012 aa12.08□□□□□ -0.48
SNRNP25-204ENST00000417493 ALDH2P05091 517 aa12.08□□□□□ -0.48
SNRNP25-204ENST00000417493 PLA2G4BP0C869 781 aa12.08□□□□□ -0.48
SNRNP25-204ENST00000417493 BCAR1P56945 870 aa12.08□□□□□ -0.48
SNRNP25-204ENST00000417493 STRN3Q13033 797 aa12.08□□□□□ -0.48
SNRNP25-204ENST00000417493 IL17AQ16552 155 aa12.08□□□□□ -0.48
SNRNP25-204ENST00000417493 ECM1Q16610 540 aa12.08□□□□□ -0.48
SNRNP25-204ENST00000417493 RINT1Q6NUQ1 792 aa12.08□□□□□ -0.48
SNRNP25-204ENST00000417493 EP400NLQ6ZTU2 488 aa12.08□□□□□ -0.48
SNRNP25-204ENST00000417493 SYT2Q8N9I0 419 aaPredicted RBP12.08□□□□□ -0.48
SNRNP25-204ENST00000417493 CPB2Q96IY4 423 aa12.08□□□□□ -0.48
SNRNP25-204ENST00000417493 TMEM134Q9H6X4 195 aa12.08□□□□□ -0.48
SNRNP25-204ENST00000417493 KMT5AQ9NQR1 393 aa12.08□□□□□ -0.48
SNRNP25-204ENST00000417493 RNF19AQ9NV58 838 aa12.08□□□□□ -0.48
SNRNP25-204ENST00000417493 ODF2LQ9ULJ1 636 aa12.08□□□□□ -0.48
SNRNP25-204ENST00000417493 SSX2IPQ9Y2D8 614 aa12.08□□□□□ -0.48
SNRNP25-204ENST00000417493 IPPQ9Y573 584 aa12.08□□□□□ -0.48
SNRNP25-204ENST00000417493 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.07□□□□□ -0.48
SNRNP25-204ENST00000417493 HIP1RO75146 1068 aa12.07□□□□□ -0.48
SNRNP25-204ENST00000417493 KRT18P05783 430 aaKnown RBP12.07□□□□□ -0.48
SNRNP25-204ENST00000417493 CDC25AP30304 524 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms