RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 NAP1L3Q99457 506 aaPredicted RBP15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 NUDT12Q9BQG2 462 aa15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 CBX6O95503 412 aa15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 CCNB1P14635 433 aa15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 KCNA3P22001 575 aa15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 RXRBP28702 533 aa15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 SCNN1BP51168 640 aa15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 PICALMQ13492 652 aa15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 NONOQ15233 471 aaKnown RBP eCLIP15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 FAM26FQ5R3K3 315 aa15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 PNMA1Q8ND90 353 aa15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 ASAP3Q8TDY4 903 aa15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 ZFAND2BQ8WV99 257 aa15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 HES6Q96HZ4 224 aa15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 KIAA1683Q9H0B3 1180 aa15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 TIAM2Q8IVF5 1701 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 SMAPO00193 183 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 WFS1O76024 890 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 GFPT2O94808 682 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 SLURP2P0DP57 97 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 COASYQ13057 564 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 MPP2Q14168 576 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 RASIP1Q5U651 963 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 HHATQ5VTY9 493 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 VSTM1Q6UX27 236 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 TRIM59Q8IWR1 403 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 SLC35G2Q8TBE7 412 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 LRRC8CQ8TDW0 803 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 CRAMP1Q96RY5 1269 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 TBC1D10AQ9BXI6 508 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 NMRK1Q9NWW6 199 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 GRHL1Q9NZI5 618 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 BIN2Q9UBW5 565 aaPredicted RBP15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 STXBP5LQ9Y2K9 1186 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 G3V3G9 751 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 SCNN1DP51172 638 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 SPDYCQ5MJ68 293 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 DCAF8Q5TAQ9 597 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 CGB2Q6NT52 195 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 SRRM1Q8IYB3 904 aaKnown RBP15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 CCDC105Q8IYK2 499 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 SYCP3Q8IZU3 236 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 RBM46Q8TBY0 533 aaKnown RBP15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 TBCKQ8TEA7 893 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 GBP5Q96PP8 586 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 PNMA5Q96PV4 448 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 DDX50Q9BQ39 737 aaKnown RBP15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 KCNQ5Q9NR82 932 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 PFASO15067 1338 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 CASZ1Q86V15 1759 aa15.79■□□□□ 0.12
NCKIPSD-204ENST00000416649 BTNL10A8MVZ5 291 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 ATP9AO75110 1047 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 ACADSP16219 412 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 KCNJ1P48048 391 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 EIF6P56537 245 aaKnown RBP15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 SGSM1Q2NKQ1 1148 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 NEK8Q86SG6 692 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 CROCCP2Q86T23 111 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 GLYCTKQ8IVS8 523 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 CKAP2Q8WWK9 683 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 LRRC37BQ96QE4 947 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 DENND2DQ9H6A0 471 aaPredicted RBP15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 M0R2N6 131 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 CACNA2D1P54289 1103 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 COBLL1Q53SF7 1204 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 FOXB2Q5VYV0 432 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 RBBP8NLQ8NC74 664 aaPredicted RBP15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 DTX3LQ8TDB6 740 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 OCEL1Q9H607 264 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 NKIRAS1Q9NYS0 192 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 FAM187AA6NFU0 413 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 ANKRD63C9JTQ0 380 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 DDX3XO00571 662 aaKnown RBP eCLIP15.78■□□□□ 0.124e-7■■■■■ 32.3
NCKIPSD-204ENST00000416649 PPEF1O14829 653 aaPredicted RBP15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 CETN3O15182 167 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 MARCH6O60337 910 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 UBTFL6P0CB48 400 aaPredicted RBP15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 CHRNA5P30532 468 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 ERFP50548 548 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 EXOC3L4Q17RC7 722 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 AGGF1Q8N302 714 aaeCLIP15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 NT5C3AQ9H0P0 336 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 PRKAG3Q9UGI9 489 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 CNOT7Q9UIV1 285 aaKnown RBP15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 HDAC9Q9UKV0 1011 aa15.78■□□□□ 0.12
NCKIPSD-204ENST00000416649 SMCO2A6NFE2 343 aa15.77■□□□□ 0.12
NCKIPSD-204ENST00000416649 DNAJC3Q13217 504 aa15.77■□□□□ 0.12
NCKIPSD-204ENST00000416649 CALCRLQ16602 461 aa15.77■□□□□ 0.12
NCKIPSD-204ENST00000416649 HERC4Q5GLZ8 1057 aaPredicted RBP15.77■□□□□ 0.12
NCKIPSD-204ENST00000416649 OR52E8Q6IFG1 317 aa15.77■□□□□ 0.12
NCKIPSD-204ENST00000416649 ARHGAP27Q6ZUM4 889 aa15.77■□□□□ 0.12
NCKIPSD-204ENST00000416649 SLFN11Q7Z7L1 901 aa15.77■□□□□ 0.12
NCKIPSD-204ENST00000416649 ALG3Q92685 438 aa15.77■□□□□ 0.12
NCKIPSD-204ENST00000416649 DBNDD1Q9H9R9 158 aa15.77■□□□□ 0.12
NCKIPSD-204ENST00000416649 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.77■□□□□ 0.12
NCKIPSD-204ENST00000416649 INTUQ9ULD6 942 aa15.77■□□□□ 0.12
NCKIPSD-204ENST00000416649 NPHP3-ACAD11A0A0J9YXS1 232 aa15.77■□□□□ 0.11
NCKIPSD-204ENST00000416649 CYTH3O43739 400 aa15.77■□□□□ 0.11
NCKIPSD-204ENST00000416649 ZCCHC18P0CG32 403 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms