RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 C12orf60Q5U649 245 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 ZBTB33Q86T24 672 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 RYBPQ8N488 228 aaPredicted RBP13.76□□□□□ -0.21
SCN1B-202ENST00000415950 TRIML2Q8N7C3 387 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 KCTD6Q8NC69 237 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 ACCSQ96QU6 501 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 NACC1Q96RE7 527 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 CSRNP1Q96S65 589 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 NGRNQ9NPE2 291 aaKnown RBP13.76□□□□□ -0.21
SCN1B-202ENST00000415950 TLK1Q9UKI8 766 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 SYF2O95926 243 aaKnown RBP13.76□□□□□ -0.21
SCN1B-202ENST00000415950 EIF2AK2P19525 551 aaKnown RBP13.76□□□□□ -0.21
SCN1B-202ENST00000415950 GPC5P78333 572 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 SEPT2Q15019 361 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 TRADDQ15628 312 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 MDH1BQ5I0G3 518 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 OR6B2Q6IFH4 312 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 PDZD4Q76G19 769 aaPredicted RBP13.76□□□□□ -0.21
SCN1B-202ENST00000415950 SGSM3Q96HU1 749 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 ZNF668Q96K58 619 aaPredicted RBP13.76□□□□□ -0.21
SCN1B-202ENST00000415950 NUP85Q9BW27 656 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 KRT82Q9NSB4 513 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 EPS15L1Q9UBC2 864 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 PODXLO00592 558 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 MYBP10242 640 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 STMN1P16949 149 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 SH3BGRP55822 239 aaPredicted RBP13.76□□□□□ -0.21
SCN1B-202ENST00000415950 STX1BP61266 288 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 ART3Q13508 389 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 PDXDC2PQ6P474 469 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 SPIRE2Q8WWL2 714 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 DHX36Q9H2U1 1008 aaKnown RBP13.76□□□□□ -0.21
SCN1B-202ENST00000415950 SSU72P8A0A1W2PR75 194 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 CAND2O75155 1236 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 GAP43P17677 238 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 PRPF38AQ8NAV1 312 aaKnown RBP13.76□□□□□ -0.21
SCN1B-202ENST00000415950 OSGEPQ9NPF4 335 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 CYP26A1O43174 497 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 POLD1P28340 1107 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 BYSLQ13895 437 aaKnown RBP13.75□□□□□ -0.21
SCN1B-202ENST00000415950 MTERF2Q49AM1 385 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 PPP6R3Q5H9R7 873 aaPredicted RBP13.75□□□□□ -0.21
SCN1B-202ENST00000415950 RHOT2Q8IXI1 618 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 ERGIC2Q96RQ1 377 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 MRPL47Q9HD33 250 aaKnown RBP13.75□□□□□ -0.21
SCN1B-202ENST00000415950 WDR64B1ANS9 1081 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 BMP3P12645 472 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 SPARCL1Q14515 664 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 Q3C1V9 767 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 TBC1D9BQ66K14 1250 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 SULF1Q8IWU6 871 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 GLIS3Q8NEA6 775 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 ZNF564Q8TBZ8 553 aaPredicted RBP13.75□□□□□ -0.21
SCN1B-202ENST00000415950 FBXO25Q8TCJ0 367 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 RFFLQ8WZ73 363 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 C7orf25Q9BPX7 421 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 LMTK2Q8IWU2 1503 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 ZBTB5O15062 677 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 SLC16A4O15374 487 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 SLC37A4O43826 429 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 MDM2Q00987 491 aaPredicted RBP13.75□□□□□ -0.21
SCN1B-202ENST00000415950 EVX2Q03828 476 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 NAB2Q15742 525 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 TRPM8Q7Z2W7 1104 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 NCAPG2Q86XI2 1143 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 CCDC124Q96CT7 223 aaKnown RBP13.75□□□□□ -0.21
SCN1B-202ENST00000415950 TLR10Q9BXR5 811 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 EMSYQ7Z589 1322 aa13.75□□□□□ -0.21
SCN1B-202ENST00000415950 GH2P01242 217 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 ATP2B4P23634 1241 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 EP400NLQ6ZTU2 488 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 CENPUQ71F23 418 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 TRIM42Q8IWZ5 723 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 TRAIPQ9BWF2 469 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 NUB1Q9Y5A7 615 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 KDM4FA0A1W2PPD8 638 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 TMEM120BA0PK00 339 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 GRID2IPA4D2P6 1211 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 STXBP3O00186 592 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 EPHB6O15197 1021 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 TMEM139Q8IV31 216 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 ANKMY2Q8IV38 441 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 ELMO3Q96BJ8 720 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 ERP27Q96DN0 273 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 BTBD6Q96KE9 485 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 TRIM55Q9BYV6 548 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 NOD2Q9HC29 1040 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 ZNF277Q9NRM2 450 aaPredicted RBP13.74□□□□□ -0.21
SCN1B-202ENST00000415950 IGF2BP3O00425 579 aaKnown RBP eCLIP13.74□□□□□ -0.21
SCN1B-202ENST00000415950 CASP4P49662 377 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 RCAN1P53805 252 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 NIM1KQ8IY84 436 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 EPS8L3Q8TE67 593 aaKnown RBP13.74□□□□□ -0.21
SCN1B-202ENST00000415950 SLITRK6Q9H5Y7 841 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 CCDC195A0A1B0GUA6 201 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 CCT8L1PA6NM43 557 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 ORC4O43929 436 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 OCRLQ01968 901 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 JAMLQ86YT9 394 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 CREG2Q8IUH2 290 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms