RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 KANSL3Q9P2N6 904 aa22.75■■□□□ 1.23
PTPRU-203ENST00000415600 PCDHB2Q9Y5E7 798 aa22.75■■□□□ 1.23
PTPRU-203ENST00000415600 CNTNAP2Q9UHC6 1331 aa22.75■■□□□ 1.23
PTPRU-203ENST00000415600 ATG2AQ2TAZ0 1938 aa22.74■■□□□ 1.23
PTPRU-203ENST00000415600 C19orf67A6NJJ6 358 aa22.74■■□□□ 1.23
PTPRU-203ENST00000415600 DCXO43602 365 aa22.74■■□□□ 1.23
PTPRU-203ENST00000415600 AXLP30530 894 aa22.74■■□□□ 1.23
PTPRU-203ENST00000415600 BCAR1P56945 870 aa22.74■■□□□ 1.23
PTPRU-203ENST00000415600 SLC39A11Q8N1S5 342 aa22.74■■□□□ 1.23
PTPRU-203ENST00000415600 ZNF579Q8NAF0 562 aaKnown RBP22.74■■□□□ 1.23
PTPRU-203ENST00000415600 CCDC51Q96ER9 411 aa22.74■■□□□ 1.23
PTPRU-203ENST00000415600 FOXP1Q9H334 677 aaPredicted RBP22.74■■□□□ 1.23
PTPRU-203ENST00000415600 BMP2KQ9NSY1 1161 aaPredicted RBP22.74■■□□□ 1.23
PTPRU-203ENST00000415600 PER2O15055 1255 aa22.73■■□□□ 1.23
PTPRU-203ENST00000415600 TRAK2O60296 914 aa22.73■■□□□ 1.23
PTPRU-203ENST00000415600 ZC3H11AO75152 810 aaKnown RBP eCLIP22.73■■□□□ 1.23
PTPRU-203ENST00000415600 ATP2B1P20020 1258 aa22.73■■□□□ 1.23
PTPRU-203ENST00000415600 MCM7P33993 719 aa22.73■■□□□ 1.23
PTPRU-203ENST00000415600 POU5F1BQ06416 359 aa22.73■■□□□ 1.23
PTPRU-203ENST00000415600 GIT2Q14161 759 aa22.73■■□□□ 1.23
PTPRU-203ENST00000415600 FOXD4L5Q5VV16 416 aaPredicted RBP22.73■■□□□ 1.23
PTPRU-203ENST00000415600 MCTP1Q6DN14 999 aa22.73■■□□□ 1.23
PTPRU-203ENST00000415600 HACE1Q8IYU2 909 aa22.73■■□□□ 1.23
PTPRU-203ENST00000415600 FOXD4L4Q8WXT5 416 aaPredicted RBP22.73■■□□□ 1.23
PTPRU-203ENST00000415600 MTMR9Q96QG7 549 aa22.73■■□□□ 1.23
PTPRU-203ENST00000415600 CLEC1BQ9P126 229 aa22.73■■□□□ 1.23
PTPRU-203ENST00000415600 BARX2Q9UMQ3 279 aaPredicted RBP22.73■■□□□ 1.23
PTPRU-203ENST00000415600 MTMR6Q9Y217 621 aa22.73■■□□□ 1.23
PTPRU-203ENST00000415600 INPP5FQ9Y2H2 1132 aa22.73■■□□□ 1.23
PTPRU-203ENST00000415600 KIF3AQ9Y496 699 aa22.73■■□□□ 1.23
PTPRU-203ENST00000415600 PCDHGC5Q9Y5F6 944 aa22.73■■□□□ 1.23
PTPRU-203ENST00000415600 PLXNA4Q9HCM2 1894 aa22.73■■□□□ 1.23
PTPRU-203ENST00000415600 SKOR2Q2VWA4 1001 aaPredicted RBP22.72■■□□□ 1.23
PTPRU-203ENST00000415600 LARP1BQ659C4 914 aaKnown RBP22.72■■□□□ 1.23
PTPRU-203ENST00000415600 FAM193BQ96PV7 902 aaPredicted RBP22.72■■□□□ 1.23
PTPRU-203ENST00000415600 LRFN3Q9BTN0 628 aa22.72■■□□□ 1.23
PTPRU-203ENST00000415600 NOL7Q9UMY1 257 aaKnown RBP22.72■■□□□ 1.23
PTPRU-203ENST00000415600 F13A1P00488 732 aa22.72■■□□□ 1.23
PTPRU-203ENST00000415600 HOXB8P17481 243 aaPredicted RBP22.72■■□□□ 1.23
PTPRU-203ENST00000415600 CA8P35219 290 aa22.72■■□□□ 1.23
PTPRU-203ENST00000415600 PBX3P40426 434 aa22.72■■□□□ 1.23
PTPRU-203ENST00000415600 GUCY1B3Q02153 619 aa22.72■■□□□ 1.23
PTPRU-203ENST00000415600 NOTUMQ6P988 496 aa22.72■■□□□ 1.23
PTPRU-203ENST00000415600 TMEM184AQ6ZMB5 413 aa22.72■■□□□ 1.23
PTPRU-203ENST00000415600 LPPQ93052 612 aa22.72■■□□□ 1.23
PTPRU-203ENST00000415600 TUFT1Q9NNX1 390 aa22.72■■□□□ 1.23
PTPRU-203ENST00000415600 TBC1D13Q9NVG8 400 aa22.72■■□□□ 1.23
PTPRU-203ENST00000415600 TCHHQ07283 1943 aa22.71■■□□□ 1.23
PTPRU-203ENST00000415600 INO80B-WBP1J3KQ70 363 aa22.71■■□□□ 1.23
PTPRU-203ENST00000415600 TRAPPC10P48553 1259 aa22.71■■□□□ 1.23
PTPRU-203ENST00000415600 PTENP60484 403 aa22.71■■□□□ 1.23
PTPRU-203ENST00000415600 CASP10Q92851 521 aa22.71■■□□□ 1.23
PTPRU-203ENST00000415600 RSAD1Q9HA92 442 aa22.71■■□□□ 1.23
PTPRU-203ENST00000415600 ZBTB39O15060 712 aa22.7■■□□□ 1.22
PTPRU-203ENST00000415600 OFD1O75665 1012 aa22.7■■□□□ 1.22
PTPRU-203ENST00000415600 GLP2RO95838 553 aa22.7■■□□□ 1.22
PTPRU-203ENST00000415600 LONRF3Q496Y0 759 aa22.7■■□□□ 1.22
PTPRU-203ENST00000415600 TPRNQ4KMQ1 711 aa22.7■■□□□ 1.22
PTPRU-203ENST00000415600 MRPL10Q7Z7H8 261 aaKnown RBP22.7■■□□□ 1.22
PTPRU-203ENST00000415600 MRPL43Q8N983 215 aaKnown RBP22.7■■□□□ 1.22
PTPRU-203ENST00000415600 MCPH1Q8NEM0 835 aa22.7■■□□□ 1.22
PTPRU-203ENST00000415600 FBXO18Q8NFZ0 1043 aa22.7■■□□□ 1.22
PTPRU-203ENST00000415600 NACC1Q96RE7 527 aa22.7■■□□□ 1.22
PTPRU-203ENST00000415600 USP15Q9Y4E8 981 aaPredicted RBP22.7■■□□□ 1.22
PTPRU-203ENST00000415600 PRR33A8MZF0 331 aa22.69■■□□□ 1.22
PTPRU-203ENST00000415600 OR52Z1P0C646 297 aa22.69■■□□□ 1.22
PTPRU-203ENST00000415600 TECP42680 631 aa22.69■■□□□ 1.22
PTPRU-203ENST00000415600 RARRES1P49788 294 aa22.69■■□□□ 1.22
PTPRU-203ENST00000415600 HAUS3Q68CZ6 603 aa22.69■■□□□ 1.22
PTPRU-203ENST00000415600 KHSRPQ92945 711 aaKnown RBP eCLIP22.69■■□□□ 1.22
PTPRU-203ENST00000415600 NFKBIZQ9BYH8 718 aa22.69■■□□□ 1.22
PTPRU-203ENST00000415600 TRIM6Q9C030 488 aaPredicted RBP22.69■■□□□ 1.22
PTPRU-203ENST00000415600 MINDY3Q9H8M7 445 aa22.69■■□□□ 1.22
PTPRU-203ENST00000415600 ATP6V1DQ9Y5K8 247 aa22.69■■□□□ 1.22
PTPRU-203ENST00000415600 STK24Q9Y6E0 443 aa22.69■■□□□ 1.22
PTPRU-203ENST00000415600 POTEMA6NI47 508 aa22.68■■□□□ 1.22
PTPRU-203ENST00000415600 ITGA4P13612 1032 aa22.68■■□□□ 1.22
PTPRU-203ENST00000415600 DDX53Q86TM3 631 aaKnown RBP22.68■■□□□ 1.22
PTPRU-203ENST00000415600 IFNLR1Q8IU57 520 aaPredicted RBP22.68■■□□□ 1.22
PTPRU-203ENST00000415600 NOSTRINQ8IVI9 506 aa22.68■■□□□ 1.22
PTPRU-203ENST00000415600 VPS52Q8N1B4 723 aa22.68■■□□□ 1.22
PTPRU-203ENST00000415600 PIGOQ8TEQ8 1089 aa22.68■■□□□ 1.22
PTPRU-203ENST00000415600 IGSF21Q96ID5 467 aa22.68■■□□□ 1.22
PTPRU-203ENST00000415600 PHF7Q9BWX1 381 aaPredicted RBP22.68■■□□□ 1.22
PTPRU-203ENST00000415600 RAB34Q9BZG1 259 aa22.68■■□□□ 1.22
PTPRU-203ENST00000415600 GBP3Q9H0R5 595 aa22.68■■□□□ 1.22
PTPRU-203ENST00000415600 XPNPEP1Q9NQW7 623 aa22.68■■□□□ 1.22
PTPRU-203ENST00000415600 LMBRD1Q9NUN5 540 aa22.68■■□□□ 1.22
PTPRU-203ENST00000415600 DBR1Q9UK59 544 aaKnown RBP22.68■■□□□ 1.22
PTPRU-203ENST00000415600 ARIH1Q9Y4X5 557 aaPredicted RBP22.68■■□□□ 1.22
PTPRU-203ENST00000415600 HIDE1A8MVS5 230 aa22.67■■□□□ 1.22
PTPRU-203ENST00000415600 NT5C1B-RDH14C9J2C7 533 aa22.67■■□□□ 1.22
PTPRU-203ENST00000415600 NR1I2O75469 434 aa22.67■■□□□ 1.22
PTPRU-203ENST00000415600 NCLP19338 710 aaKnown RBP22.67■■□□□ 1.22
PTPRU-203ENST00000415600 HOXA11P31270 313 aaPredicted RBP22.67■■□□□ 1.22
PTPRU-203ENST00000415600 ARL2P36404 184 aa22.67■■□□□ 1.22
PTPRU-203ENST00000415600 TTC38Q5R3I4 469 aa22.67■■□□□ 1.22
PTPRU-203ENST00000415600 ANKRD54Q6NXT1 300 aa22.67■■□□□ 1.22
PTPRU-203ENST00000415600 TMEM175Q9BSA9 504 aa22.67■■□□□ 1.22
PTPRU-203ENST00000415600 POLR3CQ9BUI4 534 aaPredicted RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms