RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 CCDC169A6NNP5 214 aa12.34□□□□□ -0.43
LINC00330-201ENST00000414562 TGFB1I1O43294 461 aa12.34□□□□□ -0.43
LINC00330-201ENST00000414562 KLK7P49862 253 aa12.34□□□□□ -0.43
LINC00330-201ENST00000414562 CPT1AP50416 773 aa12.34□□□□□ -0.43
LINC00330-201ENST00000414562 MARSP56192 900 aaKnown RBP12.34□□□□□ -0.43
LINC00330-201ENST00000414562 PEX3P56589 373 aa12.34□□□□□ -0.43
LINC00330-201ENST00000414562 IGBP1P78318 339 aa12.34□□□□□ -0.43
LINC00330-201ENST00000414562 ADAM17P78536 824 aa12.34□□□□□ -0.43
LINC00330-201ENST00000414562 MFSD10Q14728 455 aa12.34□□□□□ -0.43
LINC00330-201ENST00000414562 TRIM59Q8IWR1 403 aa12.34□□□□□ -0.43
LINC00330-201ENST00000414562 SLC17A8Q8NDX2 589 aa12.34□□□□□ -0.43
LINC00330-201ENST00000414562 MCPH1Q8NEM0 835 aa12.34□□□□□ -0.43
LINC00330-201ENST00000414562 OR8K1Q8NGG5 319 aa12.34□□□□□ -0.43
LINC00330-201ENST00000414562 KIFAP3Q92845 792 aa12.34□□□□□ -0.43
LINC00330-201ENST00000414562 IQCDQ96DY2 449 aa12.34□□□□□ -0.43
LINC00330-201ENST00000414562 DHX33Q9H6R0 707 aaKnown RBP12.34□□□□□ -0.43
LINC00330-201ENST00000414562 MMRN2Q9H8L6 949 aa12.34□□□□□ -0.43
LINC00330-201ENST00000414562 ATP6V0A4Q9HBG4 840 aa12.34□□□□□ -0.43
LINC00330-201ENST00000414562 CAPN11Q9UMQ6 739 aa12.34□□□□□ -0.43
LINC00330-201ENST00000414562 ZMYM2Q9UBW7 1377 aa12.34□□□□□ -0.43
LINC00330-201ENST00000414562 RNF225M0QZC1 329 aaPredicted RBP12.33□□□□□ -0.43
LINC00330-201ENST00000414562 SLC16A4O15374 487 aa12.33□□□□□ -0.43
LINC00330-201ENST00000414562 SLC16A3O15427 465 aaKnown RBP12.33□□□□□ -0.43
LINC00330-201ENST00000414562 ZSCAN12O43309 604 aa12.33□□□□□ -0.43
LINC00330-201ENST00000414562 DGAT1O75907 488 aa12.33□□□□□ -0.43
LINC00330-201ENST00000414562 SMIM10L2AP0DMW4 78 aa12.33□□□□□ -0.43
LINC00330-201ENST00000414562 SMIM10L2BP0DMW5 78 aa12.33□□□□□ -0.43
LINC00330-201ENST00000414562 CYP2J2P51589 502 aa12.33□□□□□ -0.43
LINC00330-201ENST00000414562 ACLYP53396 1101 aa12.33□□□□□ -0.43
LINC00330-201ENST00000414562 PPP2R3AQ06190 1150 aa12.33□□□□□ -0.43
LINC00330-201ENST00000414562 DMP1Q13316 513 aaPredicted RBP12.33□□□□□ -0.43
LINC00330-201ENST00000414562 PTPN14Q15678 1187 aa12.33□□□□□ -0.43
LINC00330-201ENST00000414562 NBPF20Q3BBV1 942 aa12.33□□□□□ -0.43
LINC00330-201ENST00000414562 HAUS6Q7Z4H7 955 aa12.33□□□□□ -0.43
LINC00330-201ENST00000414562 TMTC1Q8IUR5 882 aa12.33□□□□□ -0.43
LINC00330-201ENST00000414562 LRRC71Q8N4P6 559 aa12.33□□□□□ -0.43
LINC00330-201ENST00000414562 WNT8BQ93098 351 aa12.33□□□□□ -0.43
LINC00330-201ENST00000414562 TMEM143Q96AN5 459 aa12.33□□□□□ -0.43
LINC00330-201ENST00000414562 IKZF4Q9H2S9 585 aa12.33□□□□□ -0.43
LINC00330-201ENST00000414562 TMEM206Q9H813 350 aa12.33□□□□□ -0.43
LINC00330-201ENST00000414562 METTL14Q9HCE5 456 aaKnown RBP12.33□□□□□ -0.43
LINC00330-201ENST00000414562 KCND1Q9NSA2 647 aa12.33□□□□□ -0.43
LINC00330-201ENST00000414562 NRBP2Q9NSY0 501 aa12.33□□□□□ -0.43
LINC00330-201ENST00000414562 HDAC6Q9UBN7 1215 aa12.33□□□□□ -0.43
LINC00330-201ENST00000414562 OGDHLQ9ULD0 1010 aa12.33□□□□□ -0.43
LINC00330-201ENST00000414562 TRPC6Q9Y210 931 aa12.33□□□□□ -0.43
LINC00330-201ENST00000414562 IGKV6-21A0A0C4DH24 114 aa12.33□□□□□ -0.44
LINC00330-201ENST00000414562 VGLL3A8MV65 326 aa12.33□□□□□ -0.44
LINC00330-201ENST00000414562 C22orf31O95567 290 aa12.33□□□□□ -0.44
LINC00330-201ENST00000414562 TNNT1P13805 278 aa12.33□□□□□ -0.44
LINC00330-201ENST00000414562 HOXC8P31273 242 aa12.33□□□□□ -0.44
LINC00330-201ENST00000414562 POLGP54098 1239 aaPredicted RBP12.33□□□□□ -0.44
LINC00330-201ENST00000414562 TCERG1LQ5VWI1 586 aa12.33□□□□□ -0.44
LINC00330-201ENST00000414562 CYP26C1Q6V0L0 522 aa12.33□□□□□ -0.44
LINC00330-201ENST00000414562 LINC01465Q8N7H1 131 aa12.33□□□□□ -0.44
LINC00330-201ENST00000414562 GPATCH11Q8N954 259 aa12.33□□□□□ -0.44
LINC00330-201ENST00000414562 DIS3LQ8TF46 1054 aaKnown RBP12.33□□□□□ -0.44
LINC00330-201ENST00000414562 LMBR1Q8WVP7 490 aa12.33□□□□□ -0.44
LINC00330-201ENST00000414562 PPP1R13BQ96KQ4 1090 aa12.33□□□□□ -0.44
LINC00330-201ENST00000414562 CRISPLD2Q9H0B8 497 aa12.33□□□□□ -0.44
LINC00330-201ENST00000414562 AGPAT3Q9NRZ7 376 aa12.33□□□□□ -0.44
LINC00330-201ENST00000414562 FAM207AQ9NSI2 230 aaPredicted RBP12.33□□□□□ -0.44
LINC00330-201ENST00000414562 ZNHIT6Q9NWK9 470 aaKnown RBP12.33□□□□□ -0.44
LINC00330-201ENST00000414562 PCDH10Q9P2E7 1040 aa12.33□□□□□ -0.44
LINC00330-201ENST00000414562 FRMD4BQ9Y2L6 1034 aa12.33□□□□□ -0.44
LINC00330-201ENST00000414562 R3HCC1Q9Y3T6 440 aaKnown RBP12.33□□□□□ -0.44
LINC00330-201ENST00000414562 SOWAHDA6NJG2 315 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 HBP1O60381 514 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 MAFO75444 373 aaPredicted RBP12.32□□□□□ -0.44
LINC00330-201ENST00000414562 PPP1R37O75864 691 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 AKAP3O75969 853 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 PSMC2P35998 433 aaKnown RBP12.32□□□□□ -0.44
LINC00330-201ENST00000414562 ZBED6P86452 979 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 KCNH2Q12809 1159 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 GRIK4Q16099 956 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 NFIL3Q16649 462 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 DCAF17Q5H9S7 520 aaPredicted RBP12.32□□□□□ -0.44
LINC00330-201ENST00000414562 RUFY4Q6ZNE9 571 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 FAM186BQ8IYM0 893 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 NEK11Q8NG66 645 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 ASAP3Q8TDY4 903 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 ZNF668Q96K58 619 aaPredicted RBP12.32□□□□□ -0.44
LINC00330-201ENST00000414562 IFT74Q96LB3 600 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 MTG1Q9BT17 334 aaPredicted RBP12.32□□□□□ -0.44
LINC00330-201ENST00000414562 STRA6Q9BX79 667 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 KMT5AQ9NQR1 393 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 SIK3Q9Y2K2 1263 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 TREHO43280 583 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 KLRC1P26715 233 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 NPTX2P47972 431 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 CASP4P49662 377 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 SLC26A2P50443 739 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 CLCN3P51790 818 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 NCKAP1LP55160 1127 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 EMC2Q15006 297 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 PKN2Q16513 984 aaKnown RBP12.32□□□□□ -0.44
LINC00330-201ENST00000414562 FIGNQ5HY92 759 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 GDF6Q6KF10 455 aaPredicted RBP12.32□□□□□ -0.44
LINC00330-201ENST00000414562 TOGARAM2Q6ZUX3 1019 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 CCDC155Q8N6L0 562 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms