RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 N4BP1O75113 896 aaKnown RBP10.19□□□□□ -0.78
SNHG3-201ENST00000413987 GDF11O95390 407 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 CTAGE8P0CG41 777 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 HSD3B1P14060 373 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 SHMT1P34896 483 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 PDE6CP51160 858 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 GABPAQ06546 454 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 RRP1BQ14684 758 aaKnown RBP10.19□□□□□ -0.78
SNHG3-201ENST00000413987 IFIT1BQ5T764 474 aaKnown RBP10.19□□□□□ -0.78
SNHG3-201ENST00000413987 RCSD1Q6JBY9 416 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 CTAGE6Q86UF2 777 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 CTAGE4Q8IX94 777 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 ZNF444Q8N0Y2 327 aaPredicted RBP10.19□□□□□ -0.78
SNHG3-201ENST00000413987 CRACR2BQ8N4Y2 399 aaPredicted RBP10.19□□□□□ -0.78
SNHG3-201ENST00000413987 TC2NQ8N9U0 490 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 PANX2Q96RD6 677 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 BARD1Q99728 777 aaKnown RBP10.19□□□□□ -0.78
SNHG3-201ENST00000413987 MAN1C1Q9NR34 630 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 FNIP2Q9P278 1114 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 SLC12A7Q9Y666 1083 aa10.19□□□□□ -0.78
SNHG3-201ENST00000413987 CTAGE9A4FU28 777 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 TMEM127O75204 238 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 PFKFB1P16118 471 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 MUTP22033 750 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 METAP2P50579 478 aaKnown RBP eCLIP10.18□□□□□ -0.786e-10■□□□□ 9.1
SNHG3-201ENST00000413987 JAG1P78504 1218 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 CBX2Q14781 532 aaPredicted RBP10.18□□□□□ -0.78
SNHG3-201ENST00000413987 RETSATQ6NUM9 610 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 TTC17Q96AE7 1141 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 RSRC1Q96IZ7 334 aaKnown RBP10.18□□□□□ -0.78
SNHG3-201ENST00000413987 HIC2Q96JB3 615 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 EAF1Q96JC9 268 aaPredicted RBP10.18□□□□□ -0.78
SNHG3-201ENST00000413987 AIFM3Q96NN9 605 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 PNKPQ96T60 521 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 KATNAL1Q9BW62 490 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 ELAC1Q9H777 363 aaKnown RBP10.18□□□□□ -0.78
SNHG3-201ENST00000413987 CPSF2Q9P2I0 782 aaKnown RBP10.18□□□□□ -0.78
SNHG3-201ENST00000413987 DACH1Q9UI36 760 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 HOOK1Q9UJC3 728 aaKnown RBP10.18□□□□□ -0.78
SNHG3-201ENST00000413987 TRHDEQ9UKU6 1024 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 FRMPD2Q68DX3 1309 aaPredicted RBP10.18□□□□□ -0.78
SNHG3-201ENST00000413987 ERICH2A1L162 156 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 A6NNZ2 444 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 EBAG9O00559 213 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 MUSKO15146 869 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 ZBTB43O43298 467 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 TLR5O60602 858 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 RNF40O75150 1001 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 CPEP16870 476 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 SYKP43405 635 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 MAN2A2P49641 1150 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 MNAT1P51948 309 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 HIRAP54198 1017 aaPredicted RBP10.18□□□□□ -0.78
SNHG3-201ENST00000413987 ADCY1Q08828 1119 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 PABPC4Q13310 644 aaKnown RBP eCLIP10.18□□□□□ -0.78
SNHG3-201ENST00000413987 KIF4BQ2VIQ3 1234 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 HECTD3Q5T447 861 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 C1orf53Q5VUE5 145 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 ABRAXAS1Q6UWZ7 409 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 IQCA1Q86XH1 822 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 FAM169BQ8N8A8 192 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 NSUN6Q8TEA1 469 aaKnown RBP10.18□□□□□ -0.78
SNHG3-201ENST00000413987 ZBED3Q96IU2 234 aaPredicted RBP10.18□□□□□ -0.78
SNHG3-201ENST00000413987 A1CFQ9NQ94 594 aaKnown RBP10.18□□□□□ -0.78
SNHG3-201ENST00000413987 NFKBIL1Q9UBC1 381 aaPredicted RBP10.18□□□□□ -0.78
SNHG3-201ENST00000413987 MYO1AQ9UBC5 1043 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 TSR3Q9UJK0 312 aaKnown RBP10.18□□□□□ -0.78
SNHG3-201ENST00000413987 CLIC4Q9Y696 253 aa10.18□□□□□ -0.78
SNHG3-201ENST00000413987 WDR19Q8NEZ3 1342 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 DICER1Q9UPY3 1922 aaKnown RBP10.17□□□□□ -0.78
SNHG3-201ENST00000413987 BAZ2BQ9UIF8 2168 aaKnown RBP10.17□□□□□ -0.78
SNHG3-201ENST00000413987 GOLGA8AA7E2F4 631 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 TMEM232C9JQI7 657 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 AKR1B15C9JRZ8 316 aaPredicted RBP10.17□□□□□ -0.78
SNHG3-201ENST00000413987 DDX3YO15523 660 aaKnown RBP10.17□□□□□ -0.78
SNHG3-201ENST00000413987 B3GALNT1O75752 331 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 CSE1LP55060 971 aaKnown RBP10.17□□□□□ -0.78
SNHG3-201ENST00000413987 GUCY1B3Q02153 619 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 KARSQ15046 597 aaKnown RBP10.17□□□□□ -0.78
SNHG3-201ENST00000413987 SLC45A4Q5BKX6 768 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 OTUD7BQ6GQQ9 843 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 SGMS1Q86VZ5 419 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 FBXL16Q8N461 479 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 SPATA18Q8TC71 538 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 HLA-CQ95604 372 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 SHDQ96IW2 340 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 CPVLQ9H3G5 476 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 GPRC5DQ9NZD1 345 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 TMOD2Q9NZR1 351 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 DDX20Q9UHI6 824 aaKnown RBP10.17□□□□□ -0.78
SNHG3-201ENST00000413987 HACL1Q9UJ83 578 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 N6AMT1Q9Y5N5 214 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 FAM237AA0A1B0GTK4 181 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 C2orf81A6NN90 581 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 RASA4BC9J798 803 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 SHOX2O60902 331 aaPredicted RBP10.17□□□□□ -0.78
SNHG3-201ENST00000413987 COBLO75128 1261 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 HLA-DOAP06340 250 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 FDPSP14324 419 aaKnown RBP10.17□□□□□ -0.78
SNHG3-201ENST00000413987 XPAP23025 273 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms