RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 PFKFB3Q16875 520 aaPredicted RBP9.32□□□□□ -0.92
UPF3AP1-201ENST00000413731 SWI5Q1ZZU3 235 aa9.32□□□□□ -0.92
UPF3AP1-201ENST00000413731 MAP7D1Q3KQU3 841 aa9.32□□□□□ -0.92
UPF3AP1-201ENST00000413731 CEP55Q53EZ4 464 aa9.32□□□□□ -0.92
UPF3AP1-201ENST00000413731 PDE12Q6L8Q7 609 aaKnown RBP9.32□□□□□ -0.92
UPF3AP1-201ENST00000413731 DNAJC14Q6Y2X3 702 aaPredicted RBP9.32□□□□□ -0.92
UPF3AP1-201ENST00000413731 LRRC43Q8N309 656 aa9.32□□□□□ -0.92
UPF3AP1-201ENST00000413731 CCDC148Q8NFR7 591 aa9.32□□□□□ -0.92
UPF3AP1-201ENST00000413731 FEZF2Q8TBJ5 459 aa9.32□□□□□ -0.92
UPF3AP1-201ENST00000413731 CCDC12Q8WUD4 166 aaPredicted RBP9.32□□□□□ -0.92
UPF3AP1-201ENST00000413731 TNPO1Q92973 898 aaKnown RBP9.32□□□□□ -0.92
UPF3AP1-201ENST00000413731 CASD1Q96PB1 797 aa9.32□□□□□ -0.92
UPF3AP1-201ENST00000413731 TMEM117Q9H0C3 514 aa9.32□□□□□ -0.92
UPF3AP1-201ENST00000413731 ATP6V0A4Q9HBG4 840 aa9.32□□□□□ -0.92
UPF3AP1-201ENST00000413731 DNAAF2Q9NVR5 837 aaKnown RBP9.32□□□□□ -0.92
UPF3AP1-201ENST00000413731 BARHL2Q9NY43 387 aa9.32□□□□□ -0.92
UPF3AP1-201ENST00000413731 TPCN1Q9ULQ1 816 aa9.32□□□□□ -0.92
UPF3AP1-201ENST00000413731 PCDHB3Q9Y5E6 796 aa9.32□□□□□ -0.92
UPF3AP1-201ENST00000413731 FANCMQ8IYD8 2048 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 PRR23AA6NEV1 266 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 PROB1E7EW31 1015 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 GPR182O15218 404 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 PRPF3O43395 683 aaKnown RBP9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 PFKFB2O60825 505 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 GPR32O75388 356 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 ASGR2P07307 311 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 ATP4AP20648 1035 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 SREBF1P36956 1147 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 CLCN3P51790 818 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 PLCB3Q01970 1234 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 SCRN1Q12765 414 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 CLLU1OSQ5K130 101 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 FAM160B1Q5W0V3 765 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 KCNT2Q6UVM3 1135 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 ABHD15Q6UXT9 468 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 CASP10Q92851 521 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 ZNF558Q96NG5 402 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 ARHGAP9Q9BRR9 750 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 GLT8D2Q9H1C3 349 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 ELAC1Q9H777 363 aaKnown RBP9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 RIC8AQ9NPQ8 531 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 ZNF302Q9NR11 478 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 VPS54Q9P1Q0 977 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 SORCS3Q9UPU3 1222 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 NR2E1Q9Y466 385 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 HCFC2Q9Y5Z7 792 aa9.31□□□□□ -0.92
UPF3AP1-201ENST00000413731 DCHS1Q96JQ0 3298 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 SMCO2A6NFE2 343 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 C2orf71A6NGG8 1288 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 GOLGA8CPA6NN73 597 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 BHMG1C9JSJ3 638 aaPredicted RBP9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 FAM86B1E9PN63 330 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 MEIS1O00470 390 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 CLASP2O75122 1294 aaKnown RBP9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 DEXIO95424 95 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 LARGE1O95461 756 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 ABL1P00519 1130 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 FAM86B2P0C5J1 330 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 HOXB8P17481 243 aaPredicted RBP9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 PPM1AP35813 382 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 CRYBB1P53674 252 aaPredicted RBP9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 FAM189BP81408 668 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 SMC1AQ14683 1233 aaKnown RBP9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 RABEP1Q15276 862 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 NTRK3Q16288 839 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 ZNF484Q5JVG2 852 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 ODR4Q5SWX8 454 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 RARS2Q5T160 578 aaKnown RBP9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 TRMT1LQ7Z2T5 733 aaKnown RBP9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 TMC7Q7Z402 723 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 PLA2G4DQ86XP0 818 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 UBALD2Q8IYN6 164 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 REXO1Q8N1G1 1221 aaKnown RBP9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 SLC39A11Q8N1S5 342 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 PHTF2Q8N3S3 785 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 METTL13Q8N6R0 699 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 NECAB1Q8N987 351 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 RNF169Q8NCN4 708 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 GTF3C6Q969F1 213 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 ZNF668Q96K58 619 aaPredicted RBP9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 IRF2BPLQ9H1B7 796 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 ADAM7Q9H2U9 754 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 C6orf50Q9HD87 102 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 NGRNQ9NPE2 291 aaKnown RBP9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 PUF60Q9UHX1 559 aaKnown RBP9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 DMDP11532 3685 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 STK36Q9NRP7 1315 aa9.3□□□□□ -0.92
UPF3AP1-201ENST00000413731 IGLV3-22A0A075B6J6 115 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 ESYT2A0FGR8 921 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 DHX15O43143 795 aaKnown RBP9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 PRMT3O60678 531 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 GNA11P29992 359 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 CA8P35219 290 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 SCNN1AP37088 669 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 NBL1P41271 181 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 NLRP5P59047 1200 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 AP3B2Q13367 1082 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 ME3Q16798 604 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 JAKMIP3Q5VZ66 844 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 CWF19L1Q69YN2 538 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms