RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 RNF39Q9H2S5 420 aa29.17■■■□□ 2.26
VEGFA-207ENST00000413642 TLR9Q9NR96 1032 aa29.17■■■□□ 2.26
VEGFA-207ENST00000413642 SPG21Q9NZD8 308 aa29.17■■■□□ 2.26
VEGFA-207ENST00000413642 CUL9Q8IWT3 2517 aa29.16■■■□□ 2.26
VEGFA-207ENST00000413642 TNFRSF10AO00220 468 aa29.16■■■□□ 2.26
VEGFA-207ENST00000413642 B4GALT3O60512 393 aa29.16■■■□□ 2.26
VEGFA-207ENST00000413642 NRIP1P48552 1158 aa29.16■■■□□ 2.26
VEGFA-207ENST00000413642 BCAR1P56945 870 aa29.16■■■□□ 2.26
VEGFA-207ENST00000413642 KRT79Q5XKE5 535 aa29.16■■■□□ 2.26
VEGFA-207ENST00000413642 KCNK18Q7Z418 384 aa29.16■■■□□ 2.26
VEGFA-207ENST00000413642 NRDE2Q9H7Z3 1164 aa29.16■■■□□ 2.26
VEGFA-207ENST00000413642 HES2Q9Y543 173 aa29.16■■■□□ 2.26
VEGFA-207ENST00000413642 IPPQ9Y573 584 aa29.16■■■□□ 2.26
VEGFA-207ENST00000413642 ATG2AQ2TAZ0 1938 aa29.16■■■□□ 2.26
VEGFA-207ENST00000413642 VCANP13611 3396 aa29.15■■■□□ 2.26
VEGFA-207ENST00000413642 FSCN2O14926 492 aa29.15■■■□□ 2.26
VEGFA-207ENST00000413642 PER2O15055 1255 aa29.15■■■□□ 2.26
VEGFA-207ENST00000413642 IL9P15248 144 aa29.15■■■□□ 2.26
VEGFA-207ENST00000413642 NCLP19338 710 aaKnown RBP29.15■■■□□ 2.26
VEGFA-207ENST00000413642 ADAM15Q13444 863 aa29.15■■■□□ 2.26
VEGFA-207ENST00000413642 CLUL1Q15846 466 aa29.15■■■□□ 2.26
VEGFA-207ENST00000413642 PTCRAQ6ISU1 281 aaPredicted RBP29.15■■■□□ 2.26
VEGFA-207ENST00000413642 NOTUMQ6P988 496 aa29.15■■■□□ 2.26
VEGFA-207ENST00000413642 TMEM173Q86WV6 379 aaPredicted RBP29.15■■■□□ 2.26
VEGFA-207ENST00000413642 ZNF280BQ86YH2 543 aa29.15■■■□□ 2.26
VEGFA-207ENST00000413642 GBP3Q9H0R5 595 aa29.15■■■□□ 2.26
VEGFA-207ENST00000413642 CSRNP2Q9H175 543 aa29.15■■■□□ 2.26
VEGFA-207ENST00000413642 RSAD1Q9HA92 442 aa29.15■■■□□ 2.26
VEGFA-207ENST00000413642 FOXD4L1Q9NU39 408 aa29.15■■■□□ 2.26
VEGFA-207ENST00000413642 USP20Q9Y2K6 914 aa29.15■■■□□ 2.26
VEGFA-207ENST00000413642 VPS37CA5D8V6 355 aaPredicted RBP29.14■■■□□ 2.26
VEGFA-207ENST00000413642 VWA3AA6NCI4 1184 aa29.14■■■□□ 2.26
VEGFA-207ENST00000413642 TTLL13PA6NNM8 815 aa29.14■■■□□ 2.26
VEGFA-207ENST00000413642 ZC3H11AO75152 810 aaKnown RBP eCLIP29.14■■■□□ 2.26
VEGFA-207ENST00000413642 TBX10O75333 385 aa29.14■■■□□ 2.26
VEGFA-207ENST00000413642 AXLP30530 894 aa29.14■■■□□ 2.26
VEGFA-207ENST00000413642 PCBP1Q15365 356 aaKnown RBP eCLIP29.14■■■□□ 2.264e-7■■□□□ 11.7
VEGFA-207ENST00000413642 ZRSR1Q15695 479 aaKnown RBP29.14■■■□□ 2.26
VEGFA-207ENST00000413642 DNAJB4Q9UDY4 337 aa29.14■■■□□ 2.26
VEGFA-207ENST00000413642 TCF20Q9UGU0 1960 aaKnown RBP29.13■■■□□ 2.25
VEGFA-207ENST00000413642 PLXNA4Q9HCM2 1894 aa29.13■■■□□ 2.25
VEGFA-207ENST00000413642 NCK2O43639 380 aa29.13■■■□□ 2.25
VEGFA-207ENST00000413642 ITGA4P13612 1032 aa29.13■■■□□ 2.25
VEGFA-207ENST00000413642 PPM1AP35813 382 aa29.13■■■□□ 2.25
VEGFA-207ENST00000413642 RBM10P98175 930 aaKnown RBP29.13■■■□□ 2.25
VEGFA-207ENST00000413642 PLPP4Q5VZY2 271 aa29.13■■■□□ 2.25
VEGFA-207ENST00000413642 CDCA2Q69YH5 1023 aaPredicted RBP29.13■■■□□ 2.25
VEGFA-207ENST00000413642 BCL7CQ8WUZ0 217 aaPredicted RBP29.13■■■□□ 2.25
VEGFA-207ENST00000413642 PNMA5Q96PV4 448 aa29.13■■■□□ 2.25
VEGFA-207ENST00000413642 PLIN2Q99541 437 aa29.13■■■□□ 2.25
VEGFA-207ENST00000413642 TCF25Q9BQ70 676 aa29.13■■■□□ 2.25
VEGFA-207ENST00000413642 KIFC3Q9BVG8 833 aa29.13■■■□□ 2.25
VEGFA-207ENST00000413642 APOL6Q9BWW8 343 aa29.13■■■□□ 2.25
VEGFA-207ENST00000413642 TLE6Q9H808 572 aa29.13■■■□□ 2.25
VEGFA-207ENST00000413642 PUF60Q9UHX1 559 aaKnown RBP29.13■■■□□ 2.25
VEGFA-207ENST00000413642 LZTS1Q9Y250 596 aa29.13■■■□□ 2.25
VEGFA-207ENST00000413642 STK24Q9Y6E0 443 aa29.13■■■□□ 2.25
VEGFA-207ENST00000413642 GRXCR2A6NFK2 248 aa29.12■■■□□ 2.25
VEGFA-207ENST00000413642 DDHD2O94830 711 aa29.12■■■□□ 2.25
VEGFA-207ENST00000413642 EYA4O95677 639 aa29.12■■■□□ 2.25
VEGFA-207ENST00000413642 POMCP01189 267 aa29.12■■■□□ 2.25
VEGFA-207ENST00000413642 LIG1P18858 919 aa29.12■■■□□ 2.25
VEGFA-207ENST00000413642 ALDH7A1P49419 539 aaKnown RBP29.12■■■□□ 2.25
VEGFA-207ENST00000413642 RNASELQ05823 741 aaKnown RBP29.12■■■□□ 2.25
VEGFA-207ENST00000413642 NCBP1Q09161 790 aaKnown RBP29.12■■■□□ 2.25
VEGFA-207ENST00000413642 CCDC51Q96ER9 411 aa29.12■■■□□ 2.25
VEGFA-207ENST00000413642 DNM3Q9UQ16 869 aa29.12■■■□□ 2.25
VEGFA-207ENST00000413642 XIRP2A4UGR9 3374 aa29.12■■■□□ 2.25
VEGFA-207ENST00000413642 SPTBN5Q9NRC6 3674 aaKnown RBP29.12■■■□□ 2.25
VEGFA-207ENST00000413642 TTC28Q96AY4 2481 aa29.11■■■□□ 2.25
VEGFA-207ENST00000413642 HIDE1A8MVS5 230 aa29.11■■■□□ 2.25
VEGFA-207ENST00000413642 NPTXRO95502 500 aa29.11■■■□□ 2.25
VEGFA-207ENST00000413642 GALTP07902 379 aa29.11■■■□□ 2.25
VEGFA-207ENST00000413642 SLC11A1P49279 550 aa29.11■■■□□ 2.25
VEGFA-207ENST00000413642 KRT17Q04695 432 aa29.11■■■□□ 2.25
VEGFA-207ENST00000413642 ZBTB8OSQ8IWT0 167 aa29.11■■■□□ 2.25
VEGFA-207ENST00000413642 EFHBQ8N7U6 833 aa29.11■■■□□ 2.25
VEGFA-207ENST00000413642 PPP2R3CQ969Q6 453 aa29.11■■■□□ 2.25
VEGFA-207ENST00000413642 RUSC1Q9BVN2 902 aa29.11■■■□□ 2.25
VEGFA-207ENST00000413642 FZD8Q9H461 694 aa29.11■■■□□ 2.25
VEGFA-207ENST00000413642 NXF3Q9H4D5 531 aaKnown RBP29.11■■■□□ 2.25
VEGFA-207ENST00000413642 ENTPD7Q9NQZ7 604 aa29.11■■■□□ 2.25
VEGFA-207ENST00000413642 BRWD1Q9NSI6 2320 aa29.1■■■□□ 2.25
VEGFA-207ENST00000413642 A0A1B0GUA9 196 aa29.1■■■□□ 2.25
VEGFA-207ENST00000413642 EDN1P05305 212 aa29.1■■■□□ 2.25
VEGFA-207ENST00000413642 PPP4R3CPQ6ZMV5 832 aa29.1■■■□□ 2.25
VEGFA-207ENST00000413642 CNNM3Q8NE01 707 aa29.1■■■□□ 2.25
VEGFA-207ENST00000413642 VN1R2Q8NFZ6 395 aa29.1■■■□□ 2.25
VEGFA-207ENST00000413642 DEPTORQ8TB45 409 aa29.1■■■□□ 2.25
VEGFA-207ENST00000413642 URGCPQ8TCY9 931 aa29.1■■■□□ 2.25
VEGFA-207ENST00000413642 GAD1Q99259 594 aa29.1■■■□□ 2.25
VEGFA-207ENST00000413642 CD320Q9NPF0 282 aa29.1■■■□□ 2.25
VEGFA-207ENST00000413642 PRMT7Q9NVM4 692 aaPredicted RBP29.1■■■□□ 2.25
VEGFA-207ENST00000413642 MIOSQ9NXC5 875 aa29.1■■■□□ 2.25
VEGFA-207ENST00000413642 CLEC1BQ9P126 229 aa29.1■■■□□ 2.25
VEGFA-207ENST00000413642 CNTNAP2Q9UHC6 1331 aa29.1■■■□□ 2.25
VEGFA-207ENST00000413642 GLP2RO95838 553 aa29.09■■■□□ 2.25
VEGFA-207ENST00000413642 NAMPTP43490 491 aa29.09■■■□□ 2.25
VEGFA-207ENST00000413642 TMC7Q7Z402 723 aa29.09■■■□□ 2.25
VEGFA-207ENST00000413642 ZFP42Q96MM3 310 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms