RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 BCAS3Q9H6U6 928 aa18.99■□□□□ 0.63
SDCBP-202ENST00000413219 AGPAT3Q9NRZ7 376 aa18.99■□□□□ 0.63
SDCBP-202ENST00000413219 SMIM23A6NLE4 172 aa18.98■□□□□ 0.63
SDCBP-202ENST00000413219 BBOX1O75936 387 aa18.98■□□□□ 0.63
SDCBP-202ENST00000413219 SLC8A3P57103 927 aa18.98■□□□□ 0.63
SDCBP-202ENST00000413219 ZNF568Q3ZCX4 644 aa18.98■□□□□ 0.63
SDCBP-202ENST00000413219 SLFN13Q68D06 897 aa18.98■□□□□ 0.63
SDCBP-202ENST00000413219 TEX2Q8IWB9 1127 aa18.98■□□□□ 0.63
SDCBP-202ENST00000413219 KRT35Q92764 455 aa18.98■□□□□ 0.63
SDCBP-202ENST00000413219 RBM17Q96I25 401 aaKnown RBP18.98■□□□□ 0.63
SDCBP-202ENST00000413219 HSD17B14Q9BPX1 270 aa18.98■□□□□ 0.63
SDCBP-202ENST00000413219 USP40Q9NVE5 1235 aa18.98■□□□□ 0.63
SDCBP-202ENST00000413219 POLLQ9UGP5 575 aa18.98■□□□□ 0.63
SDCBP-202ENST00000413219 PASKQ96RG2 1323 aa18.98■□□□□ 0.63
SDCBP-202ENST00000413219 SFI1A8K8P3 1242 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 FOXN3O00409 490 aaPredicted RBP18.97■□□□□ 0.63
SDCBP-202ENST00000413219 EML1O00423 815 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 FTLP02792 175 aaPredicted RBP18.97■□□□□ 0.63
SDCBP-202ENST00000413219 ALADP13716 330 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 MUTP22033 750 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 COILP38432 576 aaPredicted RBP18.97■□□□□ 0.63
SDCBP-202ENST00000413219 GTF2IP78347 998 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 ARHGAP44Q17R89 818 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 GALNTL6Q49A17 601 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 PHLDB3Q6NSJ2 640 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 ZNF720Q7Z2F6 126 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 AMIGO3Q86WK7 504 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 C12orf50Q8NA57 414 aaPredicted RBP18.97■□□□□ 0.63
SDCBP-202ENST00000413219 LMO3Q8TAP4 145 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 FIZ1Q96SL8 496 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 USP15Q9Y4E8 981 aaPredicted RBP18.97■□□□□ 0.63
SDCBP-202ENST00000413219 RTN2O75298 545 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 FGFR4P22455 802 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 BFSP1Q12934 665 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 ZC2HC1CQ53FD0 456 aaPredicted RBP18.97■□□□□ 0.63
SDCBP-202ENST00000413219 PRR5LQ6MZQ0 368 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 AADACL2Q6P093 401 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 FBXO11Q86XK2 927 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 ZDHHC14Q8IZN3 488 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 TCP11Q8WWU5 503 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 CD101Q93033 1021 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 RSRC1Q96IZ7 334 aaKnown RBP18.97■□□□□ 0.63
SDCBP-202ENST00000413219 SERPINB12Q96P63 405 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 MTFR1LQ9H019 292 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 RGL1Q9NZL6 768 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 KCND2Q9NZV8 630 aa18.97■□□□□ 0.63
SDCBP-202ENST00000413219 TRIM49P0CI25 452 aa18.96■□□□□ 0.63
SDCBP-202ENST00000413219 TRIM49CP0CI26 452 aa18.96■□□□□ 0.63
SDCBP-202ENST00000413219 CHRM1P11229 460 aaPredicted RBP18.96■□□□□ 0.63
SDCBP-202ENST00000413219 NQO1P15559 274 aaKnown RBP18.96■□□□□ 0.63
SDCBP-202ENST00000413219 POLD1P28340 1107 aa18.96■□□□□ 0.63
SDCBP-202ENST00000413219 ATP5DP30049 168 aa18.96■□□□□ 0.63
SDCBP-202ENST00000413219 PSEN1P49768 467 aa18.96■□□□□ 0.63
SDCBP-202ENST00000413219 CYP2J2P51589 502 aa18.96■□□□□ 0.63
SDCBP-202ENST00000413219 CLNS1AP54105 237 aaKnown RBP18.96■□□□□ 0.63
SDCBP-202ENST00000413219 NCALDP61601 193 aa18.96■□□□□ 0.63
SDCBP-202ENST00000413219 COG2Q14746 738 aa18.96■□□□□ 0.63
SDCBP-202ENST00000413219 CHADLQ6NUI6 762 aa18.96■□□□□ 0.63
SDCBP-202ENST00000413219 TBC1D1Q86TI0 1168 aaPredicted RBP18.96■□□□□ 0.63
SDCBP-202ENST00000413219 EXOC3L1Q86VI1 746 aa18.96■□□□□ 0.63
SDCBP-202ENST00000413219 MAB21L3Q8N8X9 362 aa18.96■□□□□ 0.63
SDCBP-202ENST00000413219 IKZF4Q9H2S9 585 aa18.96■□□□□ 0.63
SDCBP-202ENST00000413219 ABCF3Q9NUQ8 709 aa18.96■□□□□ 0.63
SDCBP-202ENST00000413219 CCNL1Q9UK58 526 aaPredicted RBP18.96■□□□□ 0.63
SDCBP-202ENST00000413219 SPATA31A6Q5VVP1 1343 aa18.96■□□□□ 0.63
SDCBP-202ENST00000413219 O00370 1275 aa18.96■□□□□ 0.63
SDCBP-202ENST00000413219 P4HA2O15460 535 aa18.96■□□□□ 0.63
SDCBP-202ENST00000413219 SUN1O94901 812 aa18.96■□□□□ 0.63
SDCBP-202ENST00000413219 CLTAP09496 248 aa18.96■□□□□ 0.63
SDCBP-202ENST00000413219 EEF2P13639 858 aaKnown RBP18.96■□□□□ 0.63
SDCBP-202ENST00000413219 GBP2P32456 591 aaPredicted RBP18.96■□□□□ 0.63
SDCBP-202ENST00000413219 MARCKSL1P49006 195 aa18.96■□□□□ 0.63
SDCBP-202ENST00000413219 FAM133BQ5BKY9 247 aaKnown RBP18.96■□□□□ 0.63
SDCBP-202ENST00000413219 SLC13A5Q86YT5 568 aaPredicted RBP18.96■□□□□ 0.63
SDCBP-202ENST00000413219 FAM178BQ8IXR5 827 aa18.96■□□□□ 0.63
SDCBP-202ENST00000413219 CCDC105Q8IYK2 499 aa18.96■□□□□ 0.63
SDCBP-202ENST00000413219 SLC20A1Q8WUM9 679 aa18.96■□□□□ 0.63
SDCBP-202ENST00000413219 SLCO2A1Q92959 643 aa18.96■□□□□ 0.63
SDCBP-202ENST00000413219 UBAP1LF5GYI3 381 aa18.95■□□□□ 0.62
SDCBP-202ENST00000413219 UBOX5O94941 541 aa18.95■□□□□ 0.62
SDCBP-202ENST00000413219 RARAP10276 462 aa18.95■□□□□ 0.62
SDCBP-202ENST00000413219 COMTP21964 271 aa18.95■□□□□ 0.62
SDCBP-202ENST00000413219 IFNAR2P48551 515 aa18.95■□□□□ 0.62
SDCBP-202ENST00000413219 PNMA8AQ86V59 439 aaPredicted RBP18.95■□□□□ 0.62
SDCBP-202ENST00000413219 PIGOQ8TEQ8 1089 aa18.95■□□□□ 0.62
SDCBP-202ENST00000413219 WHRNQ9P202 907 aa18.95■□□□□ 0.62
SDCBP-202ENST00000413219 AGAP1Q9UPQ3 857 aa18.95■□□□□ 0.62
SDCBP-202ENST00000413219 SLITRK3O94933 977 aa18.94■□□□□ 0.62
SDCBP-202ENST00000413219 GZMAP12544 262 aa18.94■□□□□ 0.62
SDCBP-202ENST00000413219 ZNF76P36508 570 aa18.94■□□□□ 0.62
SDCBP-202ENST00000413219 SLCO1A2P46721 670 aa18.94■□□□□ 0.62
SDCBP-202ENST00000413219 CALCOCO2Q13137 446 aa18.94■□□□□ 0.62
SDCBP-202ENST00000413219 SIX1Q15475 284 aaPredicted RBP18.94■□□□□ 0.62
SDCBP-202ENST00000413219 TRAPPC3LQ5T215 181 aa18.94■□□□□ 0.62
SDCBP-202ENST00000413219 UBAP2Q5T6F2 1119 aaKnown RBP18.94■□□□□ 0.62
SDCBP-202ENST00000413219 COA1Q9GZY4 146 aa18.94■□□□□ 0.62
SDCBP-202ENST00000413219 BATF3Q9NR55 127 aa18.94■□□□□ 0.62
SDCBP-202ENST00000413219 DBR1Q9UK59 544 aaKnown RBP18.94■□□□□ 0.62
SDCBP-202ENST00000413219 IGLV3-22A0A075B6J6 115 aa18.94■□□□□ 0.62
SDCBP-202ENST00000413219 C6orf229H3BNL8 230 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms