RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 RBM18Q96H35 190 aaKnown RBP5.59□□□□□ -1.51
HERC4-205ENST00000412272 CTRCQ99895 268 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 DHRS9Q9BPW9 319 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 TRIM10Q9UDY6 481 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 KLHL3Q9UH77 587 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 VANGL2Q9ULK5 521 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 GPSM3Q9Y4H4 160 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 MYO5AQ9Y4I1 1855 aaKnown RBP5.59□□□□□ -1.51
HERC4-205ENST00000412272 RFX7Q2KHR2 1363 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 MAP2P11137 1827 aaKnown RBP5.59□□□□□ -1.51
HERC4-205ENST00000412272 GMNCA6NCL1 334 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 H0YC42 278 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 SEMA3EO15041 775 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 TRPA1O75762 1119 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 SFTPCP11686 197 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 HOXB1P14653 301 aaPredicted RBP5.59□□□□□ -1.51
HERC4-205ENST00000412272 IFNA8P32881 189 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 TPD52P55327 224 aaPredicted RBP5.59□□□□□ -1.51
HERC4-205ENST00000412272 RTP1P59025 263 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 CETN1Q12798 172 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 CYLC2Q14093 348 aaPredicted RBP5.59□□□□□ -1.51
HERC4-205ENST00000412272 NFE2L1Q14494 772 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 TGFBIQ15582 683 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 KLHL38Q2WGJ6 581 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 PLEKHG6Q3KR16 790 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 TTC39AQ5SRH9 613 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 TRAPPC3LQ5T215 181 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 C16orf54Q6UWD8 224 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 UNC5CLQ8IV45 518 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.59□□□□□ -1.513e-6■■■■■ 69.6
HERC4-205ENST00000412272 GSPT2Q8IYD1 628 aaKnown RBP5.59□□□□□ -1.51
HERC4-205ENST00000412272 IQCKQ8N0W5 287 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 DNAJC9Q8WXX5 260 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 METTL2AQ96IZ6 378 aaKnown RBP5.59□□□□□ -1.51
HERC4-205ENST00000412272 NLRP3Q96P20 1036 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 TMEM206Q9H813 350 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 ZNF277Q9NRM2 450 aaPredicted RBP5.59□□□□□ -1.51
HERC4-205ENST00000412272 HMG20BQ9P0W2 317 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 DPP7Q9UHL4 492 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 LRCH1Q9Y2L9 728 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 CARMIL3Q8ND23 1372 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 A0A1B0GTH6 734 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 YKT6O15498 198 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 PABPC4LP0CB38 370 aaKnown RBP5.59□□□□□ -1.51
HERC4-205ENST00000412272 RARBP10826 455 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 RPS6KB1P23443 525 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 RPL9P32969 192 aaKnown RBP5.59□□□□□ -1.51
HERC4-205ENST00000412272 ADD2P35612 726 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 UBA7P41226 1012 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 MLLT3P42568 568 aaPredicted RBP5.59□□□□□ -1.51
HERC4-205ENST00000412272 NUBP1P53384 320 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 PPP2R2BQ00005 443 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 POU5F1BQ06416 359 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 SEPT6Q14141 434 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 PLS1Q14651 629 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 RFTN1Q14699 578 aaPredicted RBP5.59□□□□□ -1.51
HERC4-205ENST00000412272 MTF1Q14872 753 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 CYP4V2Q6ZWL3 525 aaPredicted RBP5.59□□□□□ -1.51
HERC4-205ENST00000412272 PATL1Q86TB9 770 aaKnown RBP5.59□□□□□ -1.51
HERC4-205ENST00000412272 ITIH5Q86UX2 942 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 CNTROBQ8N137 903 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 DDHD1Q8NEL9 900 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 MDM1Q8TC05 714 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 MAP4K1Q92918 833 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 ZNF333Q96JL9 665 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 SERINC2Q96SA4 455 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 TIMMDC1Q9NPL8 285 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 POLR3EQ9NVU0 708 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 WDR70Q9NW82 654 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 PTTG2Q9NZH5 202 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 SELENONQ9NZV5 590 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 MYH7P12883 1935 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 MYH13Q9UKX3 1938 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 PCDH11XQ9BZA7 1347 aa5.59□□□□□ -1.52
HERC4-205ENST00000412272 ECM29Q5VYK3 1845 aa5.59□□□□□ -1.52
HERC4-205ENST00000412272 FUOMA2VDF0 154 aa5.59□□□□□ -1.52
HERC4-205ENST00000412272 ZSCAN5BA6NJL1 495 aa5.59□□□□□ -1.52
HERC4-205ENST00000412272 SNTNA6NMZ2 147 aa5.59□□□□□ -1.52
HERC4-205ENST00000412272 TRIM77I1YAP6 450 aa5.59□□□□□ -1.52
HERC4-205ENST00000412272 KRT16P08779 473 aa5.59□□□□□ -1.52
HERC4-205ENST00000412272 GTF2H1P32780 548 aa5.59□□□□□ -1.52
HERC4-205ENST00000412272 GSSP48637 474 aa5.59□□□□□ -1.52
HERC4-205ENST00000412272 SCNN1DP51172 638 aa5.59□□□□□ -1.52
HERC4-205ENST00000412272 MYL6P60660 151 aa5.59□□□□□ -1.52
HERC4-205ENST00000412272 NCALDP61601 193 aa5.59□□□□□ -1.52
HERC4-205ENST00000412272 MDM2Q00987 491 aaPredicted RBP5.59□□□□□ -1.52
HERC4-205ENST00000412272 KRT71Q3SY84 523 aa5.59□□□□□ -1.52
HERC4-205ENST00000412272 SLC10A5Q5PT55 438 aa5.59□□□□□ -1.52
HERC4-205ENST00000412272 SPATA1Q5VX52 437 aa5.59□□□□□ -1.52
HERC4-205ENST00000412272 PLBD1Q6P4A8 553 aa5.59□□□□□ -1.52
HERC4-205ENST00000412272 C4orf22Q6V702 233 aa5.59□□□□□ -1.52
HERC4-205ENST00000412272 KIF6Q6ZMV9 814 aa5.59□□□□□ -1.52
HERC4-205ENST00000412272 TXNDC2Q86VQ3 553 aa5.59□□□□□ -1.52
HERC4-205ENST00000412272 IFNLR1Q8IU57 520 aaPredicted RBP5.59□□□□□ -1.52
HERC4-205ENST00000412272 ARFGAP2Q8N6H7 521 aa5.59□□□□□ -1.52
HERC4-205ENST00000412272 TTLQ8NG68 377 aa5.59□□□□□ -1.52
HERC4-205ENST00000412272 DHX38Q92620 1227 aaKnown RBP5.59□□□□□ -1.52
HERC4-205ENST00000412272 NAP1L4Q99733 375 aaKnown RBP5.59□□□□□ -1.52
HERC4-205ENST00000412272 NUF2Q9BZD4 464 aa5.59□□□□□ -1.52
HERC4-205ENST00000412272 ATP13A3Q9H7F0 1226 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms