RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 JAG1P78504 1218 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 RHDQ02161 417 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 NFATC3Q12968 1075 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 NOLC1Q14978 699 aaKnown RBP eCLIP5.48□□□□□ -1.53
BRCA1-204ENST00000412061 RRP12Q5JTH9 1297 aaKnown RBP5.48□□□□□ -1.53
BRCA1-204ENST00000412061 CCDC174Q6PII3 467 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 B3GNT9Q6UX72 402 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 UNQ6494/PRO21346Q6UXR6 183 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 DPP8Q6V1X1 898 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-204ENST00000412061 CLASRPQ8N2M8 674 aaKnown RBP5.48□□□□□ -1.53
BRCA1-204ENST00000412061 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.48□□□□□ -1.53
BRCA1-204ENST00000412061 MZB1Q8WU39 189 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 AUTS2Q8WXX7 1259 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 TEKT5Q96M29 485 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 CLIC6Q96NY7 704 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 KCTD10Q9H3F6 313 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.48□□□□□ -1.53
BRCA1-204ENST00000412061 FNIP2Q9P278 1114 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 DENND2AQ9ULE3 1009 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 PTPN22Q9Y2R2 807 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 MYPNQ86TC9 1320 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 SETD1BQ9UPS6 1966 aaKnown RBP5.48□□□□□ -1.53
BRCA1-204ENST00000412061 DYTNA2CJ06 578 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 A6NNZ2 444 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 N4BP3O15049 544 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 PFKMP08237 780 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 ZKSCAN1P17029 563 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-204ENST00000412061 IGFBP6P24592 240 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-204ENST00000412061 CASP2P42575 452 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 GLRBP48167 497 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 SLC5A3P53794 718 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 LGALS4P56470 323 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 GEMIN4P57678 1058 aaKnown RBP5.48□□□□□ -1.53
BRCA1-204ENST00000412061 TRIM14Q14142 442 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 SPIDRQ14159 915 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 ZNF267Q14586 743 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-204ENST00000412061 KCTD2Q14681 263 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 STILQ15468 1287 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 MLANAQ16655 118 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 KCNK18Q7Z418 384 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 FAM43AQ8N2R8 423 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 JADE3Q92613 823 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 MPP4Q96JB8 637 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 TAAR9Q96RI9 348 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 GORASP1Q9BQQ3 440 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 PITHD1Q9GZP4 211 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-204ENST00000412061 MTG2Q9H4K7 406 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 ZNF277Q9NRM2 450 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-204ENST00000412061 ZFP69BQ9UJL9 534 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 TMPRSS11EQ9UL52 423 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 DGKBQ9Y6T7 804 aa5.48□□□□□ -1.53
BRCA1-204ENST00000412061 LRRC10BA6NIK2 292 aa5.47□□□□□ -1.53
BRCA1-204ENST00000412061 TPP1O14773 563 aa5.47□□□□□ -1.53
BRCA1-204ENST00000412061 TIMM44O43615 452 aa5.47□□□□□ -1.53
BRCA1-204ENST00000412061 MAFO75444 373 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-204ENST00000412061 OFD1O75665 1012 aa5.47□□□□□ -1.53
BRCA1-204ENST00000412061 CYP7B1O75881 506 aa5.47□□□□□ -1.53
BRCA1-204ENST00000412061 PCDH8O95206 1070 aa5.47□□□□□ -1.53
BRCA1-204ENST00000412061 ZRANB2O95218 330 aaKnown RBP eCLIP5.47□□□□□ -1.53
BRCA1-204ENST00000412061 OSMP13725 252 aa5.47□□□□□ -1.53
BRCA1-204ENST00000412061 SLC5A1P13866 664 aa5.47□□□□□ -1.53
BRCA1-204ENST00000412061 IL13RA1P78552 427 aa5.47□□□□□ -1.53
BRCA1-204ENST00000412061 FOXO4P98177 505 aa5.47□□□□□ -1.53
BRCA1-204ENST00000412061 ADAM9Q13443 819 aa5.47□□□□□ -1.53
BRCA1-204ENST00000412061 LLGL1Q15334 1064 aa5.47□□□□□ -1.53
BRCA1-204ENST00000412061 PUM3Q15397 648 aaKnown RBP5.47□□□□□ -1.53
BRCA1-204ENST00000412061 MUM1Q2TAK8 710 aa5.47□□□□□ -1.53
BRCA1-204ENST00000412061 OGFOD2Q6N063 350 aa5.47□□□□□ -1.53
BRCA1-204ENST00000412061 CXXC5Q7LFL8 322 aaKnown RBP5.47□□□□□ -1.53
BRCA1-204ENST00000412061 MYLK4Q86YV6 388 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-204ENST00000412061 IGDCC3Q8IVU1 814 aa5.47□□□□□ -1.53
BRCA1-204ENST00000412061 NKAPQ8N5F7 415 aaKnown RBP5.47□□□□□ -1.53
BRCA1-204ENST00000412061 TTLL6Q8N841 843 aa5.47□□□□□ -1.53
BRCA1-204ENST00000412061 FBXO15Q8NCQ5 510 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-204ENST00000412061 C1orf131Q8NDD1 294 aaKnown RBP5.47□□□□□ -1.53
BRCA1-204ENST00000412061 PPHLN1Q8NEY8 458 aaKnown RBP5.47□□□□□ -1.53
BRCA1-204ENST00000412061 OR14C36Q8NHC7 312 aa5.47□□□□□ -1.53
BRCA1-204ENST00000412061 ZSWIM3Q96MP5 696 aa5.47□□□□□ -1.53
BRCA1-204ENST00000412061 TACO1Q9BSH4 297 aaKnown RBP5.47□□□□□ -1.53
BRCA1-204ENST00000412061 C11orf84Q9BUA3 381 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-204ENST00000412061 KCMF1Q9P0J7 381 aa5.47□□□□□ -1.53
BRCA1-204ENST00000412061 FTSJ1Q9UET6 329 aa5.47□□□□□ -1.53
BRCA1-204ENST00000412061 DPP7Q9UHL4 492 aa5.47□□□□□ -1.53
BRCA1-204ENST00000412061 PCDHB6Q9Y5E3 794 aa5.47□□□□□ -1.53
BRCA1-204ENST00000412061 PCDHGB3Q9Y5G1 929 aa5.47□□□□□ -1.53
BRCA1-204ENST00000412061 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-204ENST00000412061 A0A0A6YYJ9 748 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 PQBP1O60828 265 aaKnown RBP5.46□□□□□ -1.54
BRCA1-204ENST00000412061 OPHN1O60890 802 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 IL18BPO95998 194 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 AKAP5P24588 427 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 GPR15P49685 360 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 EPHB3P54753 998 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 PPARAQ07869 468 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 MAP3K12Q12852 859 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 TRIM25Q14258 630 aaKnown RBP5.46□□□□□ -1.54
BRCA1-204ENST00000412061 PHF19Q5T6S3 580 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 KANK2Q63ZY3 851 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 LVRNQ6Q4G3 990 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 SRGAP1Q7Z6B7 1085 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms