RNA–Protein interactions for RNA: ENST00000411884.2

CLHC1-205, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 549 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-205ENST00000411884 PPP4R1LQ9P1A2 415 aa5.36□□□□□ -1.55
CLHC1-205ENST00000411884 TUBD1Q9UJT1 453 aa5.36□□□□□ -1.55
CLHC1-205ENST00000411884 MRFAP1Q9Y605 127 aa5.36□□□□□ -1.55
CLHC1-205ENST00000411884 MTSS1O43312 755 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 SLC26A4O43511 780 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 ALDH1A2O94788 518 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 TOX4O94842 621 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 PLATP00750 562 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 S100BP04271 92 aaPredicted RBP5.35□□□□□ -1.55
CLHC1-205ENST00000411884 VSIG10L2P0DP72 767 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 CCND1P24385 295 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 MCAMP43121 646 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 MEF2AQ02078 507 aaPredicted RBP5.35□□□□□ -1.55
CLHC1-205ENST00000411884 PPP3CAQ08209 521 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 MALLQ13021 153 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 DUSP8Q13202 625 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 GAGE13Q4V321 117 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 UBXN11Q5T124 520 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 ADGRE4PQ86SQ3 457 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 PNMA8AQ86V59 439 aaPredicted RBP5.35□□□□□ -1.55
CLHC1-205ENST00000411884 PPM1NQ8N819 430 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 ANKRD53Q8N9V6 530 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 RABGGTAQ92696 567 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 RPL10LQ96L21 214 aaKnown RBP5.35□□□□□ -1.55
CLHC1-205ENST00000411884 C20orf173Q96LM9 149 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 LRRC37BQ96QE4 947 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 LMF1Q96S06 567 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 DPYSL5Q9BPU6 564 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 SSBP3Q9BWW4 388 aaPredicted RBP5.35□□□□□ -1.55
CLHC1-205ENST00000411884 KRTAP9-9Q9BYP9 154 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 KRTAP9-4Q9BYQ2 154 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 GREM2Q9H772 168 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 AGO3Q9H9G7 860 aaKnown RBP5.35□□□□□ -1.55
CLHC1-205ENST00000411884 DMRT3Q9NQL9 472 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 RTEL1Q9NZ71 1219 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 PUF60Q9UHX1 559 aaKnown RBP5.35□□□□□ -1.55
CLHC1-205ENST00000411884 OAZ3Q9UMX2 235 aa5.35□□□□□ -1.55
CLHC1-205ENST00000411884 AKAP10O43572 662 aa5.34□□□□□ -1.55
CLHC1-205ENST00000411884 NDUFS2O75306 463 aa5.34□□□□□ -1.55
CLHC1-205ENST00000411884 ABLIM3O94929 683 aa5.34□□□□□ -1.55
CLHC1-205ENST00000411884 ZRANB2O95218 330 aaKnown RBP eCLIP5.34□□□□□ -1.55
CLHC1-205ENST00000411884 JUNP05412 331 aaKnown RBP5.34□□□□□ -1.55
CLHC1-205ENST00000411884 CR2P20023 1033 aa5.34□□□□□ -1.55
CLHC1-205ENST00000411884 RECQLP46063 649 aaPredicted RBP5.34□□□□□ -1.55
CLHC1-205ENST00000411884 RAB27AP51159 221 aa5.34□□□□□ -1.55
CLHC1-205ENST00000411884 EPHB1P54762 984 aa5.34□□□□□ -1.55
CLHC1-205ENST00000411884 FBLN7Q53RD9 439 aa5.34□□□□□ -1.55
CLHC1-205ENST00000411884 C19orf54Q5BKX5 351 aa5.34□□□□□ -1.55
CLHC1-205ENST00000411884 MUM1L1Q5H9M0 696 aa5.34□□□□□ -1.55
CLHC1-205ENST00000411884 TMEM240Q5SV17 173 aa5.34□□□□□ -1.55
CLHC1-205ENST00000411884 SLFN13Q68D06 897 aa5.34□□□□□ -1.55
CLHC1-205ENST00000411884 GPR135Q8IZ08 494 aa5.34□□□□□ -1.55
CLHC1-205ENST00000411884 SNX33Q8WV41 574 aa5.34□□□□□ -1.55
CLHC1-205ENST00000411884 RIN2Q8WYP3 895 aaPredicted RBP5.34□□□□□ -1.55
CLHC1-205ENST00000411884 PAWRQ96IZ0 340 aaKnown RBP5.34□□□□□ -1.55
CLHC1-205ENST00000411884 GNRHR2Q96P88 292 aa5.34□□□□□ -1.55
CLHC1-205ENST00000411884 TCF7L1Q9HCS4 588 aa5.34□□□□□ -1.55
CLHC1-205ENST00000411884 AASDHPPTQ9NRN7 309 aa5.34□□□□□ -1.55
CLHC1-205ENST00000411884 RPTORQ8N122 1335 aa5.33□□□□□ -1.56
CLHC1-205ENST00000411884 PRAMEF4O60810 478 aa5.33□□□□□ -1.56
CLHC1-205ENST00000411884 SNUPNO95149 360 aaKnown RBP5.33□□□□□ -1.56
CLHC1-205ENST00000411884 WNT3AP56704 352 aa5.33□□□□□ -1.56
CLHC1-205ENST00000411884 EFCAB2Q5VUJ9 269 aa5.33□□□□□ -1.56
CLHC1-205ENST00000411884 CMTR2Q8IYT2 770 aaKnown RBP5.33□□□□□ -1.56
CLHC1-205ENST00000411884 CPA6Q8N4T0 437 aa5.33□□□□□ -1.56
CLHC1-205ENST00000411884 LILRA3Q8N6C8 439 aaPredicted RBP5.33□□□□□ -1.56
CLHC1-205ENST00000411884 SHCBP1Q8NEM2 672 aa5.33□□□□□ -1.56
CLHC1-205ENST00000411884 GPR156Q8NFN8 814 aa5.33□□□□□ -1.56
CLHC1-205ENST00000411884 HOXB13Q92826 284 aaPredicted RBP5.33□□□□□ -1.56
CLHC1-205ENST00000411884 RBM15Q96T37 977 aaKnown RBP eCLIP5.33□□□□□ -1.56
CLHC1-205ENST00000411884 RTFDC1Q9BY42 306 aaPredicted RBP5.33□□□□□ -1.56
CLHC1-205ENST00000411884 C12orf65Q9H3J6 166 aaKnown RBP5.33□□□□□ -1.56
CLHC1-205ENST00000411884 TLR9Q9NR96 1032 aa5.33□□□□□ -1.56
CLHC1-205ENST00000411884 RBM12Q9NTZ6 932 aaKnown RBP5.33□□□□□ -1.56
CLHC1-205ENST00000411884 KLHL42Q9P2K6 505 aa5.33□□□□□ -1.56
CLHC1-205ENST00000411884 LUC7L2Q9Y383 392 aaKnown RBP5.33□□□□□ -1.56
CLHC1-205ENST00000411884 ZNF536O15090 1300 aa5.32□□□□□ -1.56
CLHC1-205ENST00000411884 KRTAP4-8A0A0G2JLE6 195 aa5.32□□□□□ -1.56
CLHC1-205ENST00000411884 NPEPPSL1A6NEC2 478 aa5.32□□□□□ -1.56
CLHC1-205ENST00000411884 GPR42O15529 346 aa5.32□□□□□ -1.56
CLHC1-205ENST00000411884 CDC14BO60729 498 aa5.32□□□□□ -1.56
CLHC1-205ENST00000411884 GSPT1P15170 499 aaKnown RBP5.32□□□□□ -1.56
CLHC1-205ENST00000411884 WASP42768 502 aa5.32□□□□□ -1.56
CLHC1-205ENST00000411884 PIN1Q13526 163 aaPredicted RBP5.32□□□□□ -1.56
CLHC1-205ENST00000411884 RIN1Q13671 783 aa5.32□□□□□ -1.56
CLHC1-205ENST00000411884 Q6ZVL8 140 aa5.32□□□□□ -1.56
CLHC1-205ENST00000411884 LIMS2Q7Z4I7 341 aa5.32□□□□□ -1.56
CLHC1-205ENST00000411884 TAX1BP1Q86VP1 789 aa5.32□□□□□ -1.56
CLHC1-205ENST00000411884 OR2I1PQ8NGU4 316 aa5.32□□□□□ -1.56
CLHC1-205ENST00000411884 JDP2Q8WYK2 163 aa5.32□□□□□ -1.56
CLHC1-205ENST00000411884 PLA2G12BQ9BX93 195 aa5.32□□□□□ -1.56
CLHC1-205ENST00000411884 RHOBTB2Q9BYZ6 727 aa5.32□□□□□ -1.56
CLHC1-205ENST00000411884 ENKD1Q9H0I2 346 aa5.32□□□□□ -1.56
CLHC1-205ENST00000411884 MSL2Q9HCI7 577 aa5.32□□□□□ -1.56
CLHC1-205ENST00000411884 IP6K2Q9UHH9 426 aa5.32□□□□□ -1.56
CLHC1-205ENST00000411884 RAPGEFL1Q9UHV5 662 aa5.32□□□□□ -1.56
CLHC1-205ENST00000411884 SERPINB13Q9UIV8 391 aa5.32□□□□□ -1.56
CLHC1-205ENST00000411884 G3BP2Q9UN86 482 aaKnown RBP5.32□□□□□ -1.56
CLHC1-205ENST00000411884 EID1Q9Y6B2 187 aa5.32□□□□□ -1.56
CLHC1-205ENST00000411884 AKR1B10O60218 316 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms