RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 TMEM132AQ24JP5 1023 aa13.22□□□□□ -0.29
NEDD1-202ENST00000411739 CLLU1OSQ5K130 101 aa13.22□□□□□ -0.29
NEDD1-202ENST00000411739 PPM1EQ8WY54 764 aa13.22□□□□□ -0.29
NEDD1-202ENST00000411739 DHX58Q96C10 678 aa13.22□□□□□ -0.29
NEDD1-202ENST00000411739 DRC1Q96MC2 740 aa13.22□□□□□ -0.29
NEDD1-202ENST00000411739 TGS1Q96RS0 853 aaKnown RBP13.22□□□□□ -0.29
NEDD1-202ENST00000411739 KMT5AQ9NQR1 393 aa13.22□□□□□ -0.29
NEDD1-202ENST00000411739 MORC2Q9Y6X9 1032 aaPredicted RBP13.22□□□□□ -0.29
NEDD1-202ENST00000411739 COL4A6Q14031 1691 aa13.21□□□□□ -0.29
NEDD1-202ENST00000411739 TMEM265A0A087WTH1 108 aa13.21□□□□□ -0.29
NEDD1-202ENST00000411739 AFF1P51825 1210 aaKnown RBP13.21□□□□□ -0.29
NEDD1-202ENST00000411739 DMP1Q13316 513 aaPredicted RBP13.21□□□□□ -0.29
NEDD1-202ENST00000411739 PPP2R5AQ15172 486 aa13.21□□□□□ -0.29
NEDD1-202ENST00000411739 ZNF598Q86UK7 904 aaKnown RBP13.21□□□□□ -0.29
NEDD1-202ENST00000411739 NFKBIZQ9BYH8 718 aa13.21□□□□□ -0.29
NEDD1-202ENST00000411739 CCDC113Q9H0I3 377 aa13.21□□□□□ -0.29
NEDD1-202ENST00000411739 FZD8Q9H461 694 aa13.21□□□□□ -0.29
NEDD1-202ENST00000411739 INPP5FQ9Y2H2 1132 aa13.21□□□□□ -0.29
NEDD1-202ENST00000411739 MYMKA6NI61 221 aa13.21□□□□□ -0.29
NEDD1-202ENST00000411739 SLC26A4O43511 780 aa13.21□□□□□ -0.29
NEDD1-202ENST00000411739 NPTXRO95502 500 aa13.21□□□□□ -0.29
NEDD1-202ENST00000411739 ERVK-21P61565 698 aa13.21□□□□□ -0.29
NEDD1-202ENST00000411739 EPC2Q52LR7 807 aa13.21□□□□□ -0.29
NEDD1-202ENST00000411739 SPOUT1Q5T280 376 aaKnown RBP13.21□□□□□ -0.29
NEDD1-202ENST00000411739 EEF1DP3Q658K8 133 aa13.21□□□□□ -0.29
NEDD1-202ENST00000411739 ATL3Q6DD88 541 aa13.21□□□□□ -0.29
NEDD1-202ENST00000411739 LRRC55Q6ZSA7 311 aa13.21□□□□□ -0.29
NEDD1-202ENST00000411739 TAS1R3Q7RTX0 852 aa13.21□□□□□ -0.29
NEDD1-202ENST00000411739 TMEM192Q8IY95 271 aa13.21□□□□□ -0.29
NEDD1-202ENST00000411739 MICALL1Q8N3F8 863 aa13.21□□□□□ -0.29
NEDD1-202ENST00000411739 MYCT1Q8N699 235 aa13.21□□□□□ -0.29
NEDD1-202ENST00000411739 SMG8Q8ND04 991 aaKnown RBP13.21□□□□□ -0.29
NEDD1-202ENST00000411739 CASD1Q96PB1 797 aa13.21□□□□□ -0.29
NEDD1-202ENST00000411739 TYW1Q9NV66 732 aaKnown RBP13.21□□□□□ -0.29
NEDD1-202ENST00000411739 K7ERI5 159 aa13.2□□□□□ -0.3
NEDD1-202ENST00000411739 FAM13AO94988 1023 aa13.2□□□□□ -0.3
NEDD1-202ENST00000411739 LINC00271P0C7V0 271 aa13.2□□□□□ -0.3
NEDD1-202ENST00000411739 PLS3P13797 630 aa13.2□□□□□ -0.3
NEDD1-202ENST00000411739 FOSL2P15408 326 aa13.2□□□□□ -0.3
NEDD1-202ENST00000411739 ANP32AP39687 249 aaKnown RBP13.2□□□□□ -0.3
NEDD1-202ENST00000411739 PBX3P40426 434 aa13.2□□□□□ -0.3
NEDD1-202ENST00000411739 NCBP1Q09161 790 aaKnown RBP13.2□□□□□ -0.3
NEDD1-202ENST00000411739 PRPF4BQ13523 1007 aaKnown RBP13.2□□□□□ -0.3
NEDD1-202ENST00000411739 CCDC85BQ15834 202 aaPredicted RBP13.2□□□□□ -0.3
NEDD1-202ENST00000411739 MAPK6Q16659 721 aa13.2□□□□□ -0.3
NEDD1-202ENST00000411739 NT5DC1Q5TFE4 455 aa13.2□□□□□ -0.3
NEDD1-202ENST00000411739 NOTUMQ6P988 496 aa13.2□□□□□ -0.3
NEDD1-202ENST00000411739 CCDC73Q6ZRK6 1079 aa13.2□□□□□ -0.3
NEDD1-202ENST00000411739 SV2BQ7L1I2 683 aa13.2□□□□□ -0.3
NEDD1-202ENST00000411739 C2orf40Q9H1Z8 148 aa13.2□□□□□ -0.3
NEDD1-202ENST00000411739 POLR2DO15514 142 aaKnown RBP13.2□□□□□ -0.3
NEDD1-202ENST00000411739 CTNNB1P35222 781 aa13.2□□□□□ -0.3
NEDD1-202ENST00000411739 NUCB2P80303 420 aa13.2□□□□□ -0.3
NEDD1-202ENST00000411739 AGMOQ6ZNB7 445 aa13.2□□□□□ -0.3
NEDD1-202ENST00000411739 KCTD17Q8N5Z5 321 aa13.2□□□□□ -0.3
NEDD1-202ENST00000411739 FBXO22Q8NEZ5 403 aa13.2□□□□□ -0.3
NEDD1-202ENST00000411739 DDX12PQ92771 950 aa13.2□□□□□ -0.3
NEDD1-202ENST00000411739 NXF3Q9H4D5 531 aaKnown RBP13.2□□□□□ -0.3
NEDD1-202ENST00000411739 ELAC1Q9H777 363 aaKnown RBP13.2□□□□□ -0.3
NEDD1-202ENST00000411739 PRMT7Q9NVM4 692 aaPredicted RBP13.2□□□□□ -0.3
NEDD1-202ENST00000411739 TBC1D7Q9P0N9 293 aa13.2□□□□□ -0.3
NEDD1-202ENST00000411739 IPPQ9Y573 584 aa13.2□□□□□ -0.3
NEDD1-202ENST00000411739 TCHHQ07283 1943 aa13.2□□□□□ -0.3
NEDD1-202ENST00000411739 A0A1B0GVL5 298 aa13.19□□□□□ -0.3
NEDD1-202ENST00000411739 ACKR2O00590 384 aa13.19□□□□□ -0.3
NEDD1-202ENST00000411739 AKAP5P24588 427 aa13.19□□□□□ -0.3
NEDD1-202ENST00000411739 CASP1P29466 404 aa13.19□□□□□ -0.3
NEDD1-202ENST00000411739 RESP18Q5W5W9 173 aa13.19□□□□□ -0.3
NEDD1-202ENST00000411739 CMTR2Q8IYT2 770 aaKnown RBP13.19□□□□□ -0.3
NEDD1-202ENST00000411739 ABI1Q8IZP0 508 aa13.19□□□□□ -0.3
NEDD1-202ENST00000411739 PDZD7Q9H5P4 517 aa13.19□□□□□ -0.3
NEDD1-202ENST00000411739 KLK14Q9P0G3 267 aa13.19□□□□□ -0.3
NEDD1-202ENST00000411739 STK17AQ9UEE5 414 aa13.19□□□□□ -0.3
NEDD1-202ENST00000411739 A0A1B0GUA9 196 aa13.19□□□□□ -0.3
NEDD1-202ENST00000411739 LPXNO60711 386 aa13.19□□□□□ -0.3
NEDD1-202ENST00000411739 EOMESO95936 686 aa13.19□□□□□ -0.3
NEDD1-202ENST00000411739 NMT1P30419 496 aaKnown RBP13.19□□□□□ -0.3
NEDD1-202ENST00000411739 E2F4Q16254 413 aa13.19□□□□□ -0.3
NEDD1-202ENST00000411739 PPP4R3CPQ6ZMV5 832 aa13.19□□□□□ -0.3
NEDD1-202ENST00000411739 GAS2L1Q99501 681 aaPredicted RBP13.19□□□□□ -0.3
NEDD1-202ENST00000411739 TARS2Q9BW92 718 aaKnown RBP13.19□□□□□ -0.3
NEDD1-202ENST00000411739 TRIM6Q9C030 488 aaPredicted RBP13.19□□□□□ -0.3
NEDD1-202ENST00000411739 ALG13Q9NP73 1137 aaKnown RBP13.19□□□□□ -0.3
NEDD1-202ENST00000411739 KCND2Q9NZV8 630 aa13.19□□□□□ -0.3
NEDD1-202ENST00000411739 ARHGAP28Q9P2N2 729 aa13.19□□□□□ -0.3
NEDD1-202ENST00000411739 ATP6V1DQ9Y5K8 247 aa13.19□□□□□ -0.3
NEDD1-202ENST00000411739 AXLP30530 894 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 BMPR1AP36894 532 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 ZBTB33Q86T24 672 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 GRAMD1CQ8IYS0 662 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 TMEM161BQ8NDZ6 487 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 ZBTB45Q96K62 511 aaPredicted RBP13.18□□□□□ -0.3
NEDD1-202ENST00000411739 TIPINQ9BVW5 301 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 TRAIPQ9BWF2 469 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 TMEM117Q9H0C3 514 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 GBP3Q9H0R5 595 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 CXCL16Q9H2A7 254 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 CNTNAP2Q9UHC6 1331 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 PRUNE2Q8WUY3 3088 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 FNDC1Q4ZHG4 1894 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms