RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 CLCN4P51793 760 aa15.95■□□□□ 0.14
HLA-DQB2-229ENST00000411527 AFF1P51825 1210 aaKnown RBP15.95■□□□□ 0.14
HLA-DQB2-229ENST00000411527 INF2Q27J81 1249 aa15.95■□□□□ 0.14
HLA-DQB2-229ENST00000411527 CCDC149Q6ZUS6 474 aa15.95■□□□□ 0.14
HLA-DQB2-229ENST00000411527 ZNF579Q8NAF0 562 aaKnown RBP15.95■□□□□ 0.14
HLA-DQB2-229ENST00000411527 FLCNQ8NFG4 579 aa15.95■□□□□ 0.14
HLA-DQB2-229ENST00000411527 PRPF31Q8WWY3 499 aaKnown RBP15.95■□□□□ 0.14
HLA-DQB2-229ENST00000411527 SLC7A3Q8WY07 619 aa15.95■□□□□ 0.14
HLA-DQB2-229ENST00000411527 RSAD1Q9HA92 442 aa15.95■□□□□ 0.14
HLA-DQB2-229ENST00000411527 MRPL17Q9NRX2 175 aaKnown RBP15.95■□□□□ 0.14
HLA-DQB2-229ENST00000411527 STK39Q9UEW8 545 aa15.95■□□□□ 0.14
HLA-DQB2-229ENST00000411527 NRP1O14786 923 aa15.94■□□□□ 0.14
HLA-DQB2-229ENST00000411527 SLC37A4O43826 429 aa15.94■□□□□ 0.14
HLA-DQB2-229ENST00000411527 DKC1O60832 514 aaKnown RBP eCLIP15.94■□□□□ 0.14
HLA-DQB2-229ENST00000411527 LILRB3O75022 631 aa15.94■□□□□ 0.14
HLA-DQB2-229ENST00000411527 POMCP01189 267 aa15.94■□□□□ 0.14
HLA-DQB2-229ENST00000411527 HOXA11P31270 313 aaPredicted RBP15.94■□□□□ 0.14
HLA-DQB2-229ENST00000411527 TDGQ13569 410 aa15.94■□□□□ 0.14
HLA-DQB2-229ENST00000411527 TOB2Q14106 344 aaPredicted RBP15.94■□□□□ 0.14
HLA-DQB2-229ENST00000411527 NPY5RQ15761 445 aa15.94■□□□□ 0.14
HLA-DQB2-229ENST00000411527 LETM2Q2VYF4 491 aa15.94■□□□□ 0.14
HLA-DQB2-229ENST00000411527 UBXN11Q5T124 520 aa15.94■□□□□ 0.14
HLA-DQB2-229ENST00000411527 RUFY3Q7L099 469 aa15.94■□□□□ 0.14
HLA-DQB2-229ENST00000411527 SRGAP1Q7Z6B7 1085 aa15.94■□□□□ 0.14
HLA-DQB2-229ENST00000411527 DAGLBQ8NCG7 672 aa15.94■□□□□ 0.14
HLA-DQB2-229ENST00000411527 TMEM143Q96AN5 459 aa15.94■□□□□ 0.14
HLA-DQB2-229ENST00000411527 CEP170P1Q96L14 293 aa15.94■□□□□ 0.14
HLA-DQB2-229ENST00000411527 AIFM3Q96NN9 605 aa15.94■□□□□ 0.14
HLA-DQB2-229ENST00000411527 TMEM175Q9BSA9 504 aa15.94■□□□□ 0.14
HLA-DQB2-229ENST00000411527 MINDY3Q9H8M7 445 aa15.94■□□□□ 0.14
HLA-DQB2-229ENST00000411527 CNTNAP2Q9UHC6 1331 aa15.94■□□□□ 0.14
HLA-DQB2-229ENST00000411527 PRR23AA6NEV1 266 aa15.93■□□□□ 0.14
HLA-DQB2-229ENST00000411527 C2CD2LO14523 706 aa15.93■□□□□ 0.14
HLA-DQB2-229ENST00000411527 P4HBP07237 508 aaKnown RBP15.93■□□□□ 0.14
HLA-DQB2-229ENST00000411527 LAMTOR4Q0VGL1 99 aa15.93■□□□□ 0.14
HLA-DQB2-229ENST00000411527 PPP2R5CQ13362 524 aa15.93■□□□□ 0.14
HLA-DQB2-229ENST00000411527 GALNT17Q6IS24 598 aa15.93■□□□□ 0.14
HLA-DQB2-229ENST00000411527 KRT25Q7Z3Z0 450 aa15.93■□□□□ 0.14
HLA-DQB2-229ENST00000411527 FRMD5Q7Z6J6 570 aa15.93■□□□□ 0.14
HLA-DQB2-229ENST00000411527 EXOC8Q8IYI6 725 aa15.93■□□□□ 0.14
HLA-DQB2-229ENST00000411527 PSPC1Q8WXF1 523 aaKnown RBP15.93■□□□□ 0.14
HLA-DQB2-229ENST00000411527 LARP6Q9BRS8 491 aaKnown RBP15.93■□□□□ 0.14
HLA-DQB2-229ENST00000411527 DHX33Q9H6R0 707 aaKnown RBP15.93■□□□□ 0.14
HLA-DQB2-229ENST00000411527 KCNK12Q9HB15 430 aa15.93■□□□□ 0.14
HLA-DQB2-229ENST00000411527 BMP2KQ9NSY1 1161 aaPredicted RBP15.93■□□□□ 0.14
HLA-DQB2-229ENST00000411527 WRAP73Q9P2S5 460 aaPredicted RBP15.93■□□□□ 0.14
HLA-DQB2-229ENST00000411527 VAV3Q9UKW4 847 aa15.93■□□□□ 0.14
HLA-DQB2-229ENST00000411527 PI15O43692 258 aa15.92■□□□□ 0.14
HLA-DQB2-229ENST00000411527 REC8O95072 547 aa15.92■□□□□ 0.14
HLA-DQB2-229ENST00000411527 SOD2P04179 222 aa15.92■□□□□ 0.14
HLA-DQB2-229ENST00000411527 NPR3P17342 541 aa15.92■□□□□ 0.14
HLA-DQB2-229ENST00000411527 NCLP19338 710 aaKnown RBP15.92■□□□□ 0.14
HLA-DQB2-229ENST00000411527 RFC5P40937 340 aa15.92■□□□□ 0.14
HLA-DQB2-229ENST00000411527 AK2P54819 239 aa15.92■□□□□ 0.14
HLA-DQB2-229ENST00000411527 STK3Q13188 491 aa15.92■□□□□ 0.14
HLA-DQB2-229ENST00000411527 CWF19L1Q69YN2 538 aaKnown RBP15.92■□□□□ 0.14
HLA-DQB2-229ENST00000411527 C15orf39Q6ZRI6 1047 aa15.92■□□□□ 0.14
HLA-DQB2-229ENST00000411527 TAS1R1Q7RTX1 841 aa15.92■□□□□ 0.14
HLA-DQB2-229ENST00000411527 ZNF274Q96GC6 653 aaPredicted RBP15.92■□□□□ 0.14
HLA-DQB2-229ENST00000411527 FAM20AQ96MK3 541 aa15.92■□□□□ 0.14
HLA-DQB2-229ENST00000411527 ZSWIM6Q9HCJ5 1215 aa15.92■□□□□ 0.14
HLA-DQB2-229ENST00000411527 KCNMB3Q9NPA1 279 aa15.92■□□□□ 0.14
HLA-DQB2-229ENST00000411527 MAN1C1Q9NR34 630 aa15.92■□□□□ 0.14
HLA-DQB2-229ENST00000411527 FBXL21Q9UKT6 434 aa15.92■□□□□ 0.14
HLA-DQB2-229ENST00000411527 KCNJ14Q9UNX9 436 aa15.92■□□□□ 0.14
HLA-DQB2-229ENST00000411527 PRG3Q9Y2Y8 225 aaPredicted RBP15.92■□□□□ 0.14
HLA-DQB2-229ENST00000411527 PPME1Q9Y570 386 aa15.92■□□□□ 0.14
HLA-DQB2-229ENST00000411527 CYP46A1Q9Y6A2 500 aa15.92■□□□□ 0.14
HLA-DQB2-229ENST00000411527 CFAP54Q96N23 3096 aa15.92■□□□□ 0.14
HLA-DQB2-229ENST00000411527 PTPRZ1P23471 2315 aaPredicted RBP15.91■□□□□ 0.14
HLA-DQB2-229ENST00000411527 CCDC195A0A1B0GUA6 201 aa15.91■□□□□ 0.14
HLA-DQB2-229ENST00000411527 ASAP2O43150 1006 aa15.91■□□□□ 0.14
HLA-DQB2-229ENST00000411527 MARCH6O60337 910 aa15.91■□□□□ 0.14
HLA-DQB2-229ENST00000411527 URODP06132 367 aa15.91■□□□□ 0.14
HLA-DQB2-229ENST00000411527 MYBP10242 640 aa15.91■□□□□ 0.14
HLA-DQB2-229ENST00000411527 ITGA4P13612 1032 aa15.91■□□□□ 0.14
HLA-DQB2-229ENST00000411527 AOC1P19801 751 aa15.91■□□□□ 0.14
HLA-DQB2-229ENST00000411527 OR1G1P47890 313 aa15.91■□□□□ 0.14
HLA-DQB2-229ENST00000411527 CPLX2Q6PUV4 134 aaKnown RBP15.91■□□□□ 0.14
HLA-DQB2-229ENST00000411527 OTUD6AQ7L8S5 288 aa15.91■□□□□ 0.14
HLA-DQB2-229ENST00000411527 FAM177A1Q8N128 213 aaPredicted RBP15.91■□□□□ 0.14
HLA-DQB2-229ENST00000411527 SIX5Q8N196 739 aa15.91■□□□□ 0.14
HLA-DQB2-229ENST00000411527 RNF149Q8NC42 400 aa15.91■□□□□ 0.14
HLA-DQB2-229ENST00000411527 SMG8Q8ND04 991 aaKnown RBP15.91■□□□□ 0.14
HLA-DQB2-229ENST00000411527 CNNM3Q8NE01 707 aa15.91■□□□□ 0.14
HLA-DQB2-229ENST00000411527 TCP11Q8WWU5 503 aa15.91■□□□□ 0.14
HLA-DQB2-229ENST00000411527 NKD2Q969F2 451 aaPredicted RBP15.91■□□□□ 0.14
HLA-DQB2-229ENST00000411527 RPS6KC1Q96S38 1066 aa15.91■□□□□ 0.14
HLA-DQB2-229ENST00000411527 UBN1Q9NPG3 1134 aa15.91■□□□□ 0.14
HLA-DQB2-229ENST00000411527 DUSP12Q9UNI6 340 aa15.91■□□□□ 0.14
HLA-DQB2-229ENST00000411527 SSX2IPQ9Y2D8 614 aa15.91■□□□□ 0.14
HLA-DQB2-229ENST00000411527 TDRD15B5MCY1 1934 aaKnown RBP15.9■□□□□ 0.14
HLA-DQB2-229ENST00000411527 CCDC194A0A1B0GVG4 234 aa15.9■□□□□ 0.14
HLA-DQB2-229ENST00000411527 TEX28O15482 410 aa15.9■□□□□ 0.14
HLA-DQB2-229ENST00000411527 ERLIN2O94905 339 aa15.9■□□□□ 0.14
HLA-DQB2-229ENST00000411527 ADH1AP07327 375 aa15.9■□□□□ 0.14
HLA-DQB2-229ENST00000411527 YWHABP31946 246 aaKnown RBP15.9■□□□□ 0.14
HLA-DQB2-229ENST00000411527 GBP2P32456 591 aaPredicted RBP15.9■□□□□ 0.14
HLA-DQB2-229ENST00000411527 EMC2Q15006 297 aa15.9■□□□□ 0.14
HLA-DQB2-229ENST00000411527 EPHA7Q15375 998 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms