RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 INF2Q27J81 1249 aa18.7■□□□□ 0.58
MRPL55-220ENST00000411464 CPLX2Q6PUV4 134 aaKnown RBP18.7■□□□□ 0.58
MRPL55-220ENST00000411464 RUFY3Q7L099 469 aa18.7■□□□□ 0.58
MRPL55-220ENST00000411464 KRT25Q7Z3Z0 450 aa18.7■□□□□ 0.58
MRPL55-220ENST00000411464 SRGAP1Q7Z6B7 1085 aa18.7■□□□□ 0.58
MRPL55-220ENST00000411464 MRPL10Q7Z7H8 261 aaKnown RBP18.7■□□□□ 0.58
MRPL55-220ENST00000411464 DAGLBQ8NCG7 672 aa18.7■□□□□ 0.58
MRPL55-220ENST00000411464 FLCNQ8NFG4 579 aa18.7■□□□□ 0.58
MRPL55-220ENST00000411464 PRPF31Q8WWY3 499 aaKnown RBP18.7■□□□□ 0.58
MRPL55-220ENST00000411464 PSPC1Q8WXF1 523 aaKnown RBP18.7■□□□□ 0.58
MRPL55-220ENST00000411464 FAM20AQ96MK3 541 aa18.7■□□□□ 0.58
MRPL55-220ENST00000411464 TMEM175Q9BSA9 504 aa18.7■□□□□ 0.58
MRPL55-220ENST00000411464 PPME1Q9Y570 386 aa18.7■□□□□ 0.58
MRPL55-220ENST00000411464 CNTNAP2Q9UHC6 1331 aa18.7■□□□□ 0.58
MRPL55-220ENST00000411464 CACNA1HO95180 2353 aa18.69■□□□□ 0.58
MRPL55-220ENST00000411464 POMCP01189 267 aa18.69■□□□□ 0.58
MRPL55-220ENST00000411464 P4HBP07237 508 aaKnown RBP18.69■□□□□ 0.58
MRPL55-220ENST00000411464 RFC5P40937 340 aa18.69■□□□□ 0.58
MRPL55-220ENST00000411464 NBL1P41271 181 aa18.69■□□□□ 0.58
MRPL55-220ENST00000411464 PPP2R5CQ13362 524 aa18.69■□□□□ 0.58
MRPL55-220ENST00000411464 LETM2Q2VYF4 491 aa18.69■□□□□ 0.58
MRPL55-220ENST00000411464 TMEM143Q96AN5 459 aa18.69■□□□□ 0.58
MRPL55-220ENST00000411464 CFAP54Q96N23 3096 aa18.69■□□□□ 0.58
MRPL55-220ENST00000411464 KMT2EQ8IZD2 1858 aa18.69■□□□□ 0.58
MRPL55-220ENST00000411464 C2CD2LO14523 706 aa18.68■□□□□ 0.58
MRPL55-220ENST00000411464 NRP1O14786 923 aa18.68■□□□□ 0.58
MRPL55-220ENST00000411464 MARCH6O60337 910 aa18.68■□□□□ 0.58
MRPL55-220ENST00000411464 B4GALT3O60512 393 aa18.68■□□□□ 0.58
MRPL55-220ENST00000411464 AFF1P51825 1210 aaKnown RBP18.68■□□□□ 0.58
MRPL55-220ENST00000411464 LAMTOR4Q0VGL1 99 aa18.68■□□□□ 0.58
MRPL55-220ENST00000411464 TOB2Q14106 344 aaPredicted RBP18.68■□□□□ 0.58
MRPL55-220ENST00000411464 ELMSAN1Q6PJG2 1045 aa18.68■□□□□ 0.58
MRPL55-220ENST00000411464 C15orf39Q6ZRI6 1047 aa18.68■□□□□ 0.58
MRPL55-220ENST00000411464 OTUD6AQ7L8S5 288 aa18.68■□□□□ 0.58
MRPL55-220ENST00000411464 ASCL5Q7RTU5 278 aa18.68■□□□□ 0.58
MRPL55-220ENST00000411464 ZNF579Q8NAF0 562 aaKnown RBP18.68■□□□□ 0.58
MRPL55-220ENST00000411464 CNNM3Q8NE01 707 aa18.68■□□□□ 0.58
MRPL55-220ENST00000411464 FEZF2Q8TBJ5 459 aa18.68■□□□□ 0.58
MRPL55-220ENST00000411464 ZNF274Q96GC6 653 aaPredicted RBP18.68■□□□□ 0.58
MRPL55-220ENST00000411464 ZSWIM6Q9HCJ5 1215 aa18.68■□□□□ 0.58
MRPL55-220ENST00000411464 UBN1Q9NPG3 1134 aa18.68■□□□□ 0.58
MRPL55-220ENST00000411464 DPP7Q9UHL4 492 aa18.68■□□□□ 0.58
MRPL55-220ENST00000411464 FBXL21Q9UKT6 434 aa18.68■□□□□ 0.58
MRPL55-220ENST00000411464 SSX2IPQ9Y2D8 614 aa18.68■□□□□ 0.58
MRPL55-220ENST00000411464 CYP46A1Q9Y6A2 500 aa18.68■□□□□ 0.58
MRPL55-220ENST00000411464 CCDC194A0A1B0GVG4 234 aa18.67■□□□□ 0.58
MRPL55-220ENST00000411464 ASAP2O43150 1006 aa18.67■□□□□ 0.58
MRPL55-220ENST00000411464 SLC37A4O43826 429 aa18.67■□□□□ 0.58
MRPL55-220ENST00000411464 LILRB3O75022 631 aa18.67■□□□□ 0.58
MRPL55-220ENST00000411464 URODP06132 367 aa18.67■□□□□ 0.58
MRPL55-220ENST00000411464 HOXA11P31270 313 aaPredicted RBP18.67■□□□□ 0.58
MRPL55-220ENST00000411464 AK2P54819 239 aa18.67■□□□□ 0.58
MRPL55-220ENST00000411464 NPY5RQ15761 445 aa18.67■□□□□ 0.58
MRPL55-220ENST00000411464 RNF149Q8NC42 400 aa18.67■□□□□ 0.58
MRPL55-220ENST00000411464 TCP11Q8WWU5 503 aa18.67■□□□□ 0.58
MRPL55-220ENST00000411464 AIFM3Q96NN9 605 aa18.67■□□□□ 0.58
MRPL55-220ENST00000411464 DHX33Q9H6R0 707 aaKnown RBP18.67■□□□□ 0.58
MRPL55-220ENST00000411464 MINDY3Q9H8M7 445 aa18.67■□□□□ 0.58
MRPL55-220ENST00000411464 KCNK12Q9HB15 430 aa18.67■□□□□ 0.58
MRPL55-220ENST00000411464 VAV3Q9UKW4 847 aa18.67■□□□□ 0.58
MRPL55-220ENST00000411464 PRR23AA6NEV1 266 aa18.66■□□□□ 0.58
MRPL55-220ENST00000411464 GAS2O43903 313 aaKnown RBP18.66■□□□□ 0.58
MRPL55-220ENST00000411464 ERLIN2O94905 339 aa18.66■□□□□ 0.58
MRPL55-220ENST00000411464 SOD2P04179 222 aa18.66■□□□□ 0.58
MRPL55-220ENST00000411464 ADH1AP07327 375 aa18.66■□□□□ 0.58
MRPL55-220ENST00000411464 ITGA4P13612 1032 aa18.66■□□□□ 0.58
MRPL55-220ENST00000411464 GCFC2P16383 781 aaKnown RBP18.66■□□□□ 0.58
MRPL55-220ENST00000411464 NCLP19338 710 aaKnown RBP18.66■□□□□ 0.58
MRPL55-220ENST00000411464 NCBP1Q09161 790 aaKnown RBP18.66■□□□□ 0.58
MRPL55-220ENST00000411464 STK3Q13188 491 aa18.66■□□□□ 0.58
MRPL55-220ENST00000411464 UBXN11Q5T124 520 aa18.66■□□□□ 0.58
MRPL55-220ENST00000411464 PPP4R3AQ6IN85 833 aa18.66■□□□□ 0.58
MRPL55-220ENST00000411464 NEK8Q86SG6 692 aa18.66■□□□□ 0.58
MRPL55-220ENST00000411464 NKD2Q969F2 451 aaPredicted RBP18.66■□□□□ 0.58
MRPL55-220ENST00000411464 RPS6KC1Q96S38 1066 aa18.66■□□□□ 0.58
MRPL55-220ENST00000411464 LARP6Q9BRS8 491 aaKnown RBP18.66■□□□□ 0.58
MRPL55-220ENST00000411464 BMP2KQ9NSY1 1161 aaPredicted RBP18.66■□□□□ 0.58
MRPL55-220ENST00000411464 IGSF9Q9P2J2 1179 aa18.66■□□□□ 0.58
MRPL55-220ENST00000411464 KCNJ14Q9UNX9 436 aa18.66■□□□□ 0.58
MRPL55-220ENST00000411464 PRG3Q9Y2Y8 225 aaPredicted RBP18.66■□□□□ 0.58
MRPL55-220ENST00000411464 NR1I2O75469 434 aa18.65■□□□□ 0.58
MRPL55-220ENST00000411464 AOC1P19801 751 aa18.65■□□□□ 0.58
MRPL55-220ENST00000411464 YWHABP31946 246 aaKnown RBP18.65■□□□□ 0.58
MRPL55-220ENST00000411464 OR1G1P47890 313 aa18.65■□□□□ 0.58
MRPL55-220ENST00000411464 FRMD5Q7Z6J6 570 aa18.65■□□□□ 0.58
MRPL55-220ENST00000411464 C4orf19Q8IY42 314 aa18.65■□□□□ 0.58
MRPL55-220ENST00000411464 CMASQ8NFW8 434 aaPredicted RBP18.65■□□□□ 0.58
MRPL55-220ENST00000411464 NAP1L4Q99733 375 aaKnown RBP18.65■□□□□ 0.58
MRPL55-220ENST00000411464 KCNMB3Q9NPA1 279 aa18.65■□□□□ 0.58
MRPL55-220ENST00000411464 MAN1C1Q9NR34 630 aa18.65■□□□□ 0.58
MRPL55-220ENST00000411464 WRAP73Q9P2S5 460 aaPredicted RBP18.65■□□□□ 0.58
MRPL55-220ENST00000411464 DUSP12Q9UNI6 340 aa18.65■□□□□ 0.58
MRPL55-220ENST00000411464 CCDC195A0A1B0GUA6 201 aa18.64■□□□□ 0.57
MRPL55-220ENST00000411464 STK25O00506 426 aa18.64■□□□□ 0.57
MRPL55-220ENST00000411464 TBX3O15119 743 aa18.64■□□□□ 0.57
MRPL55-220ENST00000411464 TEX28O15482 410 aa18.64■□□□□ 0.57
MRPL55-220ENST00000411464 PI15O43692 258 aa18.64■□□□□ 0.57
MRPL55-220ENST00000411464 CCNT1O60563 726 aaKnown RBP18.64■□□□□ 0.57
MRPL55-220ENST00000411464 XBP1P17861 261 aa18.64■□□□□ 0.57
MRPL55-220ENST00000411464 GLUD2P49448 558 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms