RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 SLC39A11Q8N1S5 342 aa21.14■□□□□ 0.97
SF3A1-202ENST00000411423 MCPH1Q8NEM0 835 aa21.14■□□□□ 0.97
SF3A1-202ENST00000411423 BCL7CQ8WUZ0 217 aaPredicted RBP21.14■□□□□ 0.97
SF3A1-202ENST00000411423 ZNF558Q96NG5 402 aa21.14■□□□□ 0.97
SF3A1-202ENST00000411423 PNMA5Q96PV4 448 aa21.14■□□□□ 0.97
SF3A1-202ENST00000411423 NRDE2Q9H7Z3 1164 aa21.14■□□□□ 0.97
SF3A1-202ENST00000411423 TBC1D13Q9NVG8 400 aa21.14■□□□□ 0.97
SF3A1-202ENST00000411423 USP20Q9Y2K6 914 aa21.14■□□□□ 0.97
SF3A1-202ENST00000411423 HES2Q9Y543 173 aa21.14■□□□□ 0.97
SF3A1-202ENST00000411423 LRRIQ4A6NIV6 560 aa21.13■□□□□ 0.97
SF3A1-202ENST00000411423 ERLIN2O94905 339 aa21.13■□□□□ 0.97
SF3A1-202ENST00000411423 SKIP12755 728 aa21.13■□□□□ 0.97
SF3A1-202ENST00000411423 IL9P15248 144 aa21.13■□□□□ 0.97
SF3A1-202ENST00000411423 NCLP19338 710 aaKnown RBP21.13■□□□□ 0.97
SF3A1-202ENST00000411423 BCAR1P56945 870 aa21.13■□□□□ 0.97
SF3A1-202ENST00000411423 RBM10P98175 930 aaKnown RBP21.13■□□□□ 0.97
SF3A1-202ENST00000411423 UBE3AQ05086 875 aa21.13■□□□□ 0.97
SF3A1-202ENST00000411423 NOMO2Q5JPE7 1267 aa21.13■□□□□ 0.97
SF3A1-202ENST00000411423 EP400NLQ6ZTU2 488 aa21.13■□□□□ 0.97
SF3A1-202ENST00000411423 RBM23Q86U06 439 aaKnown RBP21.13■□□□□ 0.97
SF3A1-202ENST00000411423 ZNF280BQ86YH2 543 aa21.13■□□□□ 0.97
SF3A1-202ENST00000411423 MRPS27Q92552 414 aaKnown RBP21.13■□□□□ 0.97
SF3A1-202ENST00000411423 TLR9Q9NR96 1032 aa21.13■□□□□ 0.97
SF3A1-202ENST00000411423 DNAJB4Q9UDY4 337 aa21.13■□□□□ 0.97
SF3A1-202ENST00000411423 IPPQ9Y573 584 aa21.13■□□□□ 0.97
SF3A1-202ENST00000411423 TTC28Q96AY4 2481 aa21.13■□□□□ 0.97
SF3A1-202ENST00000411423 PER2O15055 1255 aa21.12■□□□□ 0.97
SF3A1-202ENST00000411423 DDHD2O94830 711 aa21.12■□□□□ 0.97
SF3A1-202ENST00000411423 GLP2RO95838 553 aa21.12■□□□□ 0.97
SF3A1-202ENST00000411423 NRIP1P48552 1158 aa21.12■□□□□ 0.97
SF3A1-202ENST00000411423 GRIN1Q05586 938 aa21.12■□□□□ 0.97
SF3A1-202ENST00000411423 ADAM15Q13444 863 aa21.12■□□□□ 0.97
SF3A1-202ENST00000411423 VN1R2Q8NFZ6 395 aa21.12■□□□□ 0.97
SF3A1-202ENST00000411423 KIFC3Q9BVG8 833 aa21.12■□□□□ 0.97
SF3A1-202ENST00000411423 MRPL9Q9BYD2 267 aaKnown RBP21.12■□□□□ 0.97
SF3A1-202ENST00000411423 CSRNP2Q9H175 543 aa21.12■□□□□ 0.97
SF3A1-202ENST00000411423 FOXD4L1Q9NU39 408 aa21.12■□□□□ 0.97
SF3A1-202ENST00000411423 C5orf42Q9H799 3197 aa21.11■□□□□ 0.97
SF3A1-202ENST00000411423 VWA3AA6NCI4 1184 aa21.11■□□□□ 0.97
SF3A1-202ENST00000411423 TNFRSF10AO00220 468 aa21.11■□□□□ 0.97
SF3A1-202ENST00000411423 ZC3H11AO75152 810 aaKnown RBP eCLIP21.11■□□□□ 0.97
SF3A1-202ENST00000411423 AXLP30530 894 aa21.11■□□□□ 0.97
SF3A1-202ENST00000411423 CLUL1Q15846 466 aa21.11■□□□□ 0.97
SF3A1-202ENST00000411423 CSPP1Q1MSJ5 1256 aa21.11■□□□□ 0.97
SF3A1-202ENST00000411423 PLPP4Q5VZY2 271 aa21.11■□□□□ 0.97
SF3A1-202ENST00000411423 NOTUMQ6P988 496 aa21.11■□□□□ 0.97
SF3A1-202ENST00000411423 GLB1LQ6UWU2 654 aa21.11■□□□□ 0.97
SF3A1-202ENST00000411423 DAW1Q8N136 415 aa21.11■□□□□ 0.97
SF3A1-202ENST00000411423 LRRC15Q8TF66 581 aa21.11■□□□□ 0.97
SF3A1-202ENST00000411423 PGBD4Q96DM1 585 aa21.11■□□□□ 0.97
SF3A1-202ENST00000411423 RUSC1Q9BVN2 902 aa21.11■□□□□ 0.97
SF3A1-202ENST00000411423 CCDC113Q9H0I3 377 aa21.11■□□□□ 0.97
SF3A1-202ENST00000411423 FZD8Q9H461 694 aa21.11■□□□□ 0.97
SF3A1-202ENST00000411423 NXF3Q9H4D5 531 aaKnown RBP21.11■□□□□ 0.97
SF3A1-202ENST00000411423 RSAD1Q9HA92 442 aa21.11■□□□□ 0.97
SF3A1-202ENST00000411423 CD320Q9NPF0 282 aa21.11■□□□□ 0.97
SF3A1-202ENST00000411423 MIOSQ9NXC5 875 aa21.11■□□□□ 0.97
SF3A1-202ENST00000411423 SPG21Q9NZD8 308 aa21.11■□□□□ 0.97
SF3A1-202ENST00000411423 LZTS1Q9Y250 596 aa21.11■□□□□ 0.97
SF3A1-202ENST00000411423 VPS37CA5D8V6 355 aaPredicted RBP21.1■□□□□ 0.97
SF3A1-202ENST00000411423 GRXCR2A6NFK2 248 aa21.1■□□□□ 0.97
SF3A1-202ENST00000411423 HIDE1A8MVS5 230 aa21.1■□□□□ 0.97
SF3A1-202ENST00000411423 EYA4O95677 639 aa21.1■□□□□ 0.97
SF3A1-202ENST00000411423 GALTP07902 379 aa21.1■□□□□ 0.97
SF3A1-202ENST00000411423 SLC11A1P49279 550 aa21.1■□□□□ 0.97
SF3A1-202ENST00000411423 PCBP1Q15365 356 aaKnown RBP eCLIP21.1■□□□□ 0.973e-6■□□□□ 8.8
SF3A1-202ENST00000411423 HYIQ5T013 277 aa21.1■□□□□ 0.97
SF3A1-202ENST00000411423 KRT79Q5XKE5 535 aa21.1■□□□□ 0.97
SF3A1-202ENST00000411423 PTCRAQ6ISU1 281 aaPredicted RBP21.1■□□□□ 0.97
SF3A1-202ENST00000411423 PPP4R3CPQ6ZMV5 832 aa21.1■□□□□ 0.97
SF3A1-202ENST00000411423 PLIN2Q99541 437 aa21.1■□□□□ 0.97
SF3A1-202ENST00000411423 VN1R3Q9BXE9 311 aa21.1■□□□□ 0.97
SF3A1-202ENST00000411423 RAB34Q9BZG1 259 aa21.1■□□□□ 0.97
SF3A1-202ENST00000411423 GBP3Q9H0R5 595 aa21.1■□□□□ 0.97
SF3A1-202ENST00000411423 CLEC1BQ9P126 229 aa21.1■□□□□ 0.97
SF3A1-202ENST00000411423 A0A1B0GUA9 196 aa21.09■□□□□ 0.97
SF3A1-202ENST00000411423 NPTXRO95502 500 aa21.09■□□□□ 0.97
SF3A1-202ENST00000411423 POMCP01189 267 aa21.09■□□□□ 0.97
SF3A1-202ENST00000411423 MAPK7Q13164 816 aa21.09■□□□□ 0.97
SF3A1-202ENST00000411423 FAM173BQ6P4H8 233 aa21.09■□□□□ 0.97
SF3A1-202ENST00000411423 MICAL1Q8TDZ2 1067 aa21.09■□□□□ 0.97
SF3A1-202ENST00000411423 CCDC51Q96ER9 411 aa21.09■□□□□ 0.97
SF3A1-202ENST00000411423 TCF25Q9BQ70 676 aa21.09■□□□□ 0.97
SF3A1-202ENST00000411423 APOL6Q9BWW8 343 aa21.09■□□□□ 0.97
SF3A1-202ENST00000411423 CNTNAP2Q9UHC6 1331 aa21.08■□□□□ 0.97
SF3A1-202ENST00000411423 ITGA4P13612 1032 aa21.08■□□□□ 0.97
SF3A1-202ENST00000411423 SYT1P21579 422 aa21.08■□□□□ 0.97
SF3A1-202ENST00000411423 PPM1AP35813 382 aa21.08■□□□□ 0.97
SF3A1-202ENST00000411423 MLH1P40692 756 aa21.08■□□□□ 0.97
SF3A1-202ENST00000411423 NAMPTP43490 491 aa21.08■□□□□ 0.97
SF3A1-202ENST00000411423 RESTQ13127 1097 aa21.08■□□□□ 0.97
SF3A1-202ENST00000411423 ZRSR1Q15695 479 aaKnown RBP21.08■□□□□ 0.97
SF3A1-202ENST00000411423 DUSP6Q16828 381 aa21.08■□□□□ 0.97
SF3A1-202ENST00000411423 FAM187BQ17R55 369 aa21.08■□□□□ 0.97
SF3A1-202ENST00000411423 RINT1Q6NUQ1 792 aa21.08■□□□□ 0.97
SF3A1-202ENST00000411423 C1orf186Q6ZWK4 172 aa21.08■□□□□ 0.97
SF3A1-202ENST00000411423 EFHBQ8N7U6 833 aa21.08■□□□□ 0.97
SF3A1-202ENST00000411423 GSTCDQ8NEC7 633 aa21.08■□□□□ 0.97
SF3A1-202ENST00000411423 KHSRPQ92945 711 aaKnown RBP eCLIP21.08■□□□□ 0.97
SF3A1-202ENST00000411423 MSLNLQ96KJ4 702 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms