RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 TPCN1Q9ULQ1 816 aa5.84□□□□□ -1.47
LSM5-205ENST00000409952 CORO2BQ9UQ03 480 aa5.84□□□□□ -1.47
LSM5-205ENST00000409952 ITIH6Q6UXX5 1313 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 TCRBV5S4A2TA0A5A2 114 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 H7BY64 318 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 MAN2B1O00754 1011 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 SCDO00767 359 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 ADAMTS3O15072 1205 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 FRS3O43559 492 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 CSTBP04080 98 aaKnown RBP5.83□□□□□ -1.48
LSM5-205ENST00000409952 CLEC2LP0C7M8 214 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 TMEM253P0C7T8 217 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 MYF5P13349 255 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 MCCP23508 829 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 FNTBP49356 437 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 ERVFRD-1P60508 538 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 ZNF543Q08ER8 600 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 MUM1Q2TAK8 710 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 PGBD2Q6P3X8 592 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 GALNT18Q6P9A2 607 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 CCDC62Q6P9F0 684 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 CYP2R1Q6VVX0 501 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 ESPNLQ6ZVH7 1005 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 PDZD4Q76G19 769 aaPredicted RBP5.83□□□□□ -1.48
LSM5-205ENST00000409952 NME9Q86XW9 330 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 NLGN2Q8NFZ4 835 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 LTV1Q96GA3 475 aaPredicted RBP5.83□□□□□ -1.48
LSM5-205ENST00000409952 APIPQ96GX9 242 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 TMEM41AQ96HV5 264 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 UBXN10Q96LJ8 280 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 C16orf92Q96LL3 132 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 PTCHD1Q96NR3 888 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 DIRC2Q96SL1 478 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 CDADC1Q9BWV3 514 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 ANO3Q9BYT9 981 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 WNT8AQ9H1J5 351 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 UNC45AQ9H3U1 944 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 KCNH7Q9NS40 1196 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 SRPK3Q9UPE1 567 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 STXBP5LQ9Y2K9 1186 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 SNX13Q9Y5W8 968 aa5.83□□□□□ -1.48
LSM5-205ENST00000409952 MYOCOSA0A1B0GUC4 107 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 CCDC154A6NI56 674 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 CLASP2O75122 1294 aaKnown RBP5.82□□□□□ -1.48
LSM5-205ENST00000409952 MBD4O95243 580 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 PYGLP06737 847 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 SMARCA1P28370 1054 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 STT3AP46977 705 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 MAPK10P53779 464 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 YBX1P67809 324 aaKnown RBP5.82□□□□□ -1.48
LSM5-205ENST00000409952 G3BP1Q13283 466 aaKnown RBP eCLIP5.82□□□□□ -1.48
LSM5-205ENST00000409952 LAPTM5Q13571 262 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 SLC14A2Q15849 920 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 CCDC96Q2M329 555 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 FKBP15Q5T1M5 1219 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 CPZQ66K79 652 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 FAM180BQ6P0A1 224 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 APOA5Q6Q788 366 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 NLRP10Q86W26 655 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 CPNE8Q86YQ8 564 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 KLHDC4Q8TBB5 520 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 TRAPPC12Q8WVT3 735 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 JMJD8Q96S16 334 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 PPP1R16BQ96T49 567 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 TTLL2Q9BWV7 592 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 LRRC27Q9C0I9 530 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 OSBPL5Q9H0X9 879 aaPredicted RBP5.82□□□□□ -1.48
LSM5-205ENST00000409952 KMT5AQ9NQR1 393 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 SLC45A1Q9Y2W3 748 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 PCDHGB2Q9Y5G2 931 aa5.82□□□□□ -1.48
LSM5-205ENST00000409952 C7orf72A4D263 438 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 RRN3P2A6NIE6 340 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 HTRA2O43464 458 aaPredicted RBP5.81□□□□□ -1.48
LSM5-205ENST00000409952 NPHS1O60500 1241 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 DHRS4L1P0CG22 281 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 COL6A2P12110 1019 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 GLDCP23378 1020 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 BCAR1P56945 870 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 MPP1Q00013 466 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 STARD3Q14849 445 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 KIR3DS1Q14943 382 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 TMEM132BQ14DG7 1078 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 PAN2Q504Q3 1202 aaKnown RBP5.81□□□□□ -1.48
LSM5-205ENST00000409952 PITRM1Q5JRX3 1037 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 HLA-DQA1Q5Y7H0 255 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 FAAH2Q6GMR7 532 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 RETSATQ6NUM9 610 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 SYTL1Q8IYJ3 562 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 NLGN4XQ8N0W4 816 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 Q8N1Y9 231 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 ZNF527Q8NB42 609 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 SH3RF2Q8TEC5 729 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 BRI3BPQ8WY22 251 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 RIN2Q8WYP3 895 aaPredicted RBP5.81□□□□□ -1.48
LSM5-205ENST00000409952 USP13Q92995 863 aaPredicted RBP5.81□□□□□ -1.48
LSM5-205ENST00000409952 MAML3Q96JK9 1138 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 SERINC2Q96SA4 455 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 SLC38A3Q99624 504 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 C22orf23Q9BZE7 217 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms