RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 KIAA1468Q9P260 1216 aa18.29■□□□□ 0.52
SUMO1-208ENST00000409627 ST3GAL5Q9UNP4 418 aa18.29■□□□□ 0.52
SUMO1-208ENST00000409627 CNTNAP2Q9UHC6 1331 aa18.28■□□□□ 0.52
SUMO1-208ENST00000409627 ACKR2O00590 384 aa18.28■□□□□ 0.52
SUMO1-208ENST00000409627 EIF3DO15371 548 aaKnown RBP eCLIP18.28■□□□□ 0.52
SUMO1-208ENST00000409627 TSPAN1O60635 241 aa18.28■□□□□ 0.52
SUMO1-208ENST00000409627 FGFR4P22455 802 aa18.28■□□□□ 0.52
SUMO1-208ENST00000409627 AXLP30530 894 aa18.28■□□□□ 0.52
SUMO1-208ENST00000409627 CASP5P51878 434 aa18.28■□□□□ 0.52
SUMO1-208ENST00000409627 NFX1Q12986 1120 aaKnown RBP18.28■□□□□ 0.52
SUMO1-208ENST00000409627 STRN3Q13033 797 aa18.28■□□□□ 0.52
SUMO1-208ENST00000409627 CCDC183Q5T5S1 534 aa18.28■□□□□ 0.52
SUMO1-208ENST00000409627 CNKSR3Q6P9H4 555 aa18.28■□□□□ 0.52
SUMO1-208ENST00000409627 EPM2AIP1Q7L775 607 aaPredicted RBP18.28■□□□□ 0.52
SUMO1-208ENST00000409627 SYAP1Q96A49 352 aaPredicted RBP18.28■□□□□ 0.52
SUMO1-208ENST00000409627 GTPBP4Q9BZE4 634 aaKnown RBP18.28■□□□□ 0.52
SUMO1-208ENST00000409627 SLC39A2Q9NP94 309 aa18.28■□□□□ 0.52
SUMO1-208ENST00000409627 AGPAT5Q9NUQ2 364 aa18.28■□□□□ 0.52
SUMO1-208ENST00000409627 PCDH10Q9P2E7 1040 aa18.28■□□□□ 0.52
SUMO1-208ENST00000409627 TBX20Q9UMR3 447 aa18.28■□□□□ 0.52
SUMO1-208ENST00000409627 PCDHB13Q9Y5F0 798 aa18.28■□□□□ 0.52
SUMO1-208ENST00000409627 UBE4BO95155 1302 aa18.27■□□□□ 0.52
SUMO1-208ENST00000409627 MYBP10242 640 aa18.27■□□□□ 0.52
SUMO1-208ENST00000409627 MLLT1Q03111 559 aaPredicted RBP18.27■□□□□ 0.52
SUMO1-208ENST00000409627 STK4Q13043 487 aa18.27■□□□□ 0.52
SUMO1-208ENST00000409627 ZC2HC1CQ53FD0 456 aaPredicted RBP18.27■□□□□ 0.52
SUMO1-208ENST00000409627 L1TD1Q5T7N2 865 aaKnown RBP18.27■□□□□ 0.52
SUMO1-208ENST00000409627 RBM43Q6ZSC3 357 aaKnown RBP18.27■□□□□ 0.52
SUMO1-208ENST00000409627 MAP4K3Q8IVH8 894 aa18.27■□□□□ 0.52
SUMO1-208ENST00000409627 KIAA0895Q8NCT3 520 aa18.27■□□□□ 0.52
SUMO1-208ENST00000409627 GLIS3Q8NEA6 775 aa18.27■□□□□ 0.52
SUMO1-208ENST00000409627 DBF4BQ8NFT6 615 aa18.27■□□□□ 0.52
SUMO1-208ENST00000409627 FTHL17Q9BXU8 183 aa18.27■□□□□ 0.52
SUMO1-208ENST00000409627 CHST12Q9NRB3 414 aa18.27■□□□□ 0.52
SUMO1-208ENST00000409627 TMEM63CQ9P1W3 806 aa18.27■□□□□ 0.52
SUMO1-208ENST00000409627 MAN1B1Q9UKM7 699 aa18.27■□□□□ 0.52
SUMO1-208ENST00000409627 EDN1P05305 212 aa18.26■□□□□ 0.51
SUMO1-208ENST00000409627 NCBP1Q09161 790 aaKnown RBP18.26■□□□□ 0.51
SUMO1-208ENST00000409627 PRPF4BQ13523 1007 aaKnown RBP18.26■□□□□ 0.51
SUMO1-208ENST00000409627 BMT2Q1RMZ1 405 aa18.26■□□□□ 0.51
SUMO1-208ENST00000409627 ZNF658Q5TYW1 1059 aaPredicted RBP18.26■□□□□ 0.51
SUMO1-208ENST00000409627 TRIML1Q8N9V2 468 aa18.26■□□□□ 0.51
SUMO1-208ENST00000409627 ZNF507Q8TCN5 953 aa18.26■□□□□ 0.51
SUMO1-208ENST00000409627 MRPL4Q9BYD3 311 aaKnown RBP18.26■□□□□ 0.51
SUMO1-208ENST00000409627 TMX1Q9H3N1 280 aa18.26■□□□□ 0.51
SUMO1-208ENST00000409627 B4GALT5O43286 388 aa18.25■□□□□ 0.51
SUMO1-208ENST00000409627 PIGRP01833 764 aa18.25■□□□□ 0.51
SUMO1-208ENST00000409627 ARF4P18085 180 aaPredicted RBP18.25■□□□□ 0.51
SUMO1-208ENST00000409627 HOXA11P31270 313 aaPredicted RBP18.25■□□□□ 0.51
SUMO1-208ENST00000409627 MAGEA10P43363 369 aaPredicted RBP18.25■□□□□ 0.51
SUMO1-208ENST00000409627 DSC3Q14574 896 aa18.25■□□□□ 0.51
SUMO1-208ENST00000409627 TCTN1Q2MV58 587 aa18.25■□□□□ 0.51
SUMO1-208ENST00000409627 COBLL1Q53SF7 1204 aa18.25■□□□□ 0.51
SUMO1-208ENST00000409627 CAVIN1Q6NZI2 390 aaKnown RBP18.25■□□□□ 0.51
SUMO1-208ENST00000409627 NOTUMQ6P988 496 aa18.25■□□□□ 0.51
SUMO1-208ENST00000409627 PSRC1Q6PGN9 363 aaPredicted RBP18.25■□□□□ 0.51
SUMO1-208ENST00000409627 ZPBP2Q6X784 338 aa18.25■□□□□ 0.51
SUMO1-208ENST00000409627 SCFD1Q8WVM8 642 aa18.25■□□□□ 0.51
SUMO1-208ENST00000409627 CCDC51Q96ER9 411 aa18.25■□□□□ 0.51
SUMO1-208ENST00000409627 ACCSQ96QU6 501 aa18.25■□□□□ 0.51
SUMO1-208ENST00000409627 TMEM206Q9H813 350 aa18.25■□□□□ 0.51
SUMO1-208ENST00000409627 EXOC7Q9UPT5 735 aa18.25■□□□□ 0.51
SUMO1-208ENST00000409627 PIN4Q9Y237 131 aaKnown RBP18.25■□□□□ 0.51
SUMO1-208ENST00000409627 GDAQ9Y2T3 454 aa18.25■□□□□ 0.51
SUMO1-208ENST00000409627 TTLL13PA6NNM8 815 aa18.24■□□□□ 0.51
SUMO1-208ENST00000409627 H0YGN5 161 aa18.24■□□□□ 0.51
SUMO1-208ENST00000409627 BAIAP3O94812 1187 aa18.24■□□□□ 0.51
SUMO1-208ENST00000409627 PRPF6O94906 941 aaKnown RBP18.24■□□□□ 0.51
SUMO1-208ENST00000409627 KIF20AO95235 890 aa18.24■□□□□ 0.51
SUMO1-208ENST00000409627 ACRP10323 421 aa18.24■□□□□ 0.51
SUMO1-208ENST00000409627 ACTN1P12814 892 aa18.24■□□□□ 0.51
SUMO1-208ENST00000409627 ZSCAN20P17040 1043 aaPredicted RBP18.24■□□□□ 0.51
SUMO1-208ENST00000409627 EPHB4P54760 987 aa18.24■□□□□ 0.51
SUMO1-208ENST00000409627 MORC3Q14149 939 aa18.24■□□□□ 0.51
SUMO1-208ENST00000409627 C16orf59Q7L2K0 433 aa18.24■□□□□ 0.51
SUMO1-208ENST00000409627 CPB2Q96IY4 423 aa18.24■□□□□ 0.51
SUMO1-208ENST00000409627 ACO2Q99798 780 aaKnown RBP18.24■□□□□ 0.51
SUMO1-208ENST00000409627 TARS2Q9BW92 718 aaKnown RBP18.24■□□□□ 0.51
SUMO1-208ENST00000409627 TNFSF13BQ9Y275 285 aa18.24■□□□□ 0.51
SUMO1-208ENST00000409627 TNRC18O15417 2968 aaPredicted RBP18.23■□□□□ 0.51
SUMO1-208ENST00000409627 ZMYM2Q9UBW7 1377 aa18.23■□□□□ 0.51
SUMO1-208ENST00000409627 A0A1B0GUA9 196 aa18.23■□□□□ 0.51
SUMO1-208ENST00000409627 ABHD14A-ACY1A0A1B0GW23 586 aa18.23■□□□□ 0.51
SUMO1-208ENST00000409627 RBAK-RBAKDNI3L0D1 243 aa18.23■□□□□ 0.51
SUMO1-208ENST00000409627 BIN1O00499 593 aa18.23■□□□□ 0.51
SUMO1-208ENST00000409627 N4BP3O15049 544 aa18.23■□□□□ 0.51
SUMO1-208ENST00000409627 MGEA5O60502 916 aa18.23■□□□□ 0.51
SUMO1-208ENST00000409627 EFCAB14O75071 495 aa18.23■□□□□ 0.51
SUMO1-208ENST00000409627 KCNA1Q09470 495 aa18.23■□□□□ 0.51
SUMO1-208ENST00000409627 IKBKEQ14164 716 aa18.23■□□□□ 0.51
SUMO1-208ENST00000409627 ATF7IP2Q5U623 682 aa18.23■□□□□ 0.51
SUMO1-208ENST00000409627 MYOCDQ8IZQ8 938 aa18.23■□□□□ 0.51
SUMO1-208ENST00000409627 GUF1Q8N442 669 aaKnown RBP18.23■□□□□ 0.51
SUMO1-208ENST00000409627 LINC01599Q8WXQ3 324 aa18.23■□□□□ 0.51
SUMO1-208ENST00000409627 BICD1Q96G01 975 aa18.23■□□□□ 0.51
SUMO1-208ENST00000409627 TRAIPQ9BWF2 469 aa18.23■□□□□ 0.51
SUMO1-208ENST00000409627 TSPYL2Q9H2G4 693 aaPredicted RBP18.23■□□□□ 0.51
SUMO1-208ENST00000409627 PDZD7Q9H5P4 517 aa18.23■□□□□ 0.51
SUMO1-208ENST00000409627 RGS18Q9NS28 235 aa18.23■□□□□ 0.51
SUMO1-208ENST00000409627 USP20Q9Y2K6 914 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms